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Bioc-devel November 2015

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Monday, November 30, 2015 4 emails
Stephanie M. Gogarten ncdf deprecation Aitor GONZALEZ fix build error Brian Long fix build error Aitor GONZALEZ fix build error
Tuesday, November 24, 2015 7 emails
Martin Morgan Bioc twitter bot is on repeat Robert M. Flight Bioc twitter bot is on repeat Martin Morgan Bioc twitter bot is on repeat Robert M. Flight Bioc twitter bot is on repeat Jim Hester Bioc twitter bot is on repeat Michael Love Bioc twitter bot is on repeat Steve Lianoglou PANTHER.db GOSLIM_ID hosed?
Monday, November 23, 2015 5 emails
Leonardo Collado Torres Coverage test badge not updating Vincent Carey Behavior of select function in AnnotationDbi Martin Morgan Behavior of select function in AnnotationDbi James W. MacDonald Behavior of select function in AnnotationDbi Jim Hester PANTHER.db GOSLIM_ID hosed?
Sunday, November 22, 2015 3 emails
Martin Morgan Is there a way to change the name of R package that is already published on bioconductor? Marcin Kosiński Is there a way to change the name of R package that is already published on bioconductor? Hervé Pagès Behavior of select function in AnnotationDbi
Saturday, November 21, 2015 1 email
James W. MacDonald Behavior of select function in AnnotationDbi
Friday, November 20, 2015 8 emails
Hervé Pagès Behavior of select function in AnnotationDbi Hervé Pagès Behavior of select function in AnnotationDbi Martin Morgan Behavior of select function in AnnotationDbi James W. MacDonald Behavior of select function in AnnotationDbi Jim Hester Coverage test badge not updating Julius Müller PANTHER.db GOSLIM_ID hosed? Martin Morgan PANTHER.db GOSLIM_ID hosed? Steve Lianoglou PANTHER.db GOSLIM_ID hosed?
Thursday, November 19, 2015 2 emails
顾祖光 remove history vignettes Brian Long remove history vignettes
Wednesday, November 18, 2015 11 emails
Hervé Pagès Unexpected behaviour with Assays and Vector classes Hervé Pagès A bioconductor package archive? Ludwig Geistlinger Troubles using R/Bioc-devel with Mac OS X El Capitan 10.11.1 Gabriel Becker A bioconductor package archive? Martin Morgan Troubles using R/Bioc-devel with Mac OS X El Capitan 10.11.1 Henrik Bengtsson Troubles using R/Bioc-devel with Mac OS X El Capitan 10.11.1 Rainer Johannes Troubles using R/Bioc-devel with Mac OS X El Capitan 10.11.1 Ludwig Geistlinger Troubles using R/Bioc-devel with Mac OS X El Capitan 10.11.1 Rainer Johannes Troubles using R/Bioc-devel with Mac OS X El Capitan 10.11.1 Martin Morgan Troubles using R/Bioc-devel with Mac OS X El Capitan 10.11.1 Ludwig Geistlinger Troubles using R/Bioc-devel with Mac OS X El Capitan 10.11.1
Tuesday, November 17, 2015 7 emails
Leonardo Collado Torres Coverage test badge not updating Leonardo Collado Torres remove history vignettes Gabriel Becker remove history vignettes 顾祖光 remove history vignettes Gabriel Becker remove history vignettes ZHANG Yu Package Submission 顾祖光 remove history vignettes
Monday, November 16, 2015 8 emails
Hervé Pagès Unexpected behaviour with Assays and Vector classes Dario Strbenac Is there a way to change the name of R package that is already published on bioconductor? Hervé Pagès Is there a way to change the name of R package that is already published on bioconductor? Hervé Pagès Unexpected behaviour with Assays and Vector classes Marcin Kosiński Is there a way to change the name of R package that is already published on bioconductor? Aaron Lun Base class for interaction data - expressions of interest Aaron Lun Base class for interaction data - expressions of interest Aaron Lun Base class for interaction data - expressions of interest
Sunday, November 15, 2015 3 emails
Aaron Lun Unexpected behaviour with Assays and Vector classes Hervé Pagès Unexpected behaviour with Assays and Vector classes Aaron Lun Unexpected behaviour with Assays and Vector classes
Wednesday, November 11, 2015 6 emails
Hervé Pagès Access check.log file after error Blattmann Peter Access check.log file after error Brian Long Access check.log file after error Brian Long Access check.log file after error James W. MacDonald Access check.log file after error Blattmann Peter Access check.log file after error
Tuesday, November 10, 2015 1 email
Malcolm Perry Base class for interaction data - expressions of interest
Monday, November 9, 2015 5 emails
Rainer Johannes Gviz: implementing support for FaFiles from AnnotationHub Martin Morgan Gviz: implementing support for FaFiles from AnnotationHub Rainer Johannes Gviz: implementing support for FaFiles from AnnotationHub Hahne, Florian Gviz: implementing support for FaFiles from AnnotationHub Rainer Johannes Gviz: implementing support for FaFiles from AnnotationHub
Sunday, November 8, 2015 5 emails
Aaron Lun Base class for interaction data - expressions of interest Vincent Carey Base class for interaction data - expressions of interest Vincent Carey Base class for interaction data - expressions of interest Aaron Lun Base class for interaction data - expressions of interest Laurent Gatto Base class for interaction data - expressions of interest
Saturday, November 7, 2015 3 emails
Tim Triche, Jr. Base class for interaction data - expressions of interest Ludwig Geistlinger Base class for interaction data - expressions of interest Martin Morgan Base class for interaction data - expressions of interest
Friday, November 6, 2015 3 emails
Obenchain, Valerie error in stable AnnotationHub Obenchain, Valerie Moving from MakeOrganismPackage to AnnotationHub recipes Martin Morgan citation() error for BiocParallel and S4Vectors
Thursday, November 5, 2015 5 emails
Stephanie M. Gogarten Reducing memory footprint of large object Keith Hughitt Moving from MakeOrganismPackage to AnnotationHub recipes Aaron Lun Base class for interaction data - expressions of interest Fischer, Bernd Reducing memory footprint of large object Christian Arnold Reducing memory footprint of large object
Wednesday, November 4, 2015 2 emails
Hahne, Florian Gviz: GeneRegionTrack from EnsDb objects Rainer Johannes Gviz: GeneRegionTrack from EnsDb objects
Tuesday, November 3, 2015 12 emails
Martin Morgan citation() error for BiocParallel and S4Vectors Leonardo Collado Torres citation() error for BiocParallel and S4Vectors Yu, Guangchuang commit fail in devel branch Dan Tenenbaum commit fail in devel branch Yu, Guangchuang commit fail in devel branch Dan Tenenbaum AnnotationHub downtime Wed 11/4 Leonardo Collado Torres BiocStyle::doc_date() not found when testing on Travis via metacran/r-builder Andrzej Oleś Idea for improved visibility of Bioconductor packages Michael Lawrence is.unsorted method for GRanges objects Peter Hickey is.unsorted method for GRanges objects Michael Lawrence is.unsorted method for GRanges objects Andrzej Oleś BiocStyle::doc_date() not found when testing on Travis via metacran/r-builder
Monday, November 2, 2015 12 emails
Hervé Pagès is.unsorted method for GRanges objects Peter Hickey is.unsorted method for GRanges objects Leonardo Collado Torres BiocStyle::doc_date() not found when testing on Travis via metacran/r-builder Leonardo Collado Torres BiocStyle::doc_date() not found when testing on Travis via metacran/r-builder Michael Lawrence is.unsorted method for GRanges objects Hervé Pagès is.unsorted method for GRanges objects Peter Haverty is.unsorted method for GRanges objects Michael Lawrence is.unsorted method for GRanges objects Dan Tenenbaum Idea for improved visibility of Bioconductor packages Gabriel Becker is.unsorted method for GRanges objects Peter Hickey is.unsorted method for GRanges objects Zhu, Lihua (Julie) A: CRISPRseek package: be aware that as of Oct 2015, CRISPRseek works best for for