Bioc-devel - February 2019 - Thread View

[Bioc-devel] SPB inconsistencies

2 msgs Feb 28

Ludwig Geistlinger SPB inconsistencies Feb 28, 2019

Martin Morgan SPB inconsistencies Feb 28, 2019

[Bioc-devel] R CMD check takes too long

2 msgs Feb 27

Ko-Kang Kevin Wang R CMD check takes too long Feb 26, 2019

Shepherd, Lori R CMD check takes too long Feb 27, 2019

[Bioc-devel] GenVisR Package Failing

4 msgs Feb 27

Skidmore, Zach GenVisR Package Failing Feb 26, 2019

Shepherd, Lori GenVisR Package Failing Feb 26, 2019

Skidmore, Zach GenVisR Package Failing Feb 26, 2019

Shepherd, Lori GenVisR Package Failing Feb 27, 2019

[Bioc-devel] How critical is package style for bioconductor?

4 msgs Feb 26

Aaron Chevalier How critical is package style for bioconductor? Feb 26, 2019

Turaga, Nitesh How critical is package style for bioconductor? Feb 26, 2019

Kasper Daniel Hansen How critical is package style for bioconductor? Feb 26, 2019

Michael Lawrence How critical is package style for bioconductor? Feb 26, 2019

[Bioc-devel] Warning about the size of git pack file

2 msgs Feb 26

Vinh Tran Warning about the size of git pack file Feb 22, 2019

Turaga, Nitesh Warning about the size of git pack file Feb 26, 2019

[Bioc-devel] Error package build

4 msgs Feb 26

margaret linan Error package build Feb 25, 2019

Kasper Daniel Hansen Error package build Feb 25, 2019

margaret linan Error package build Feb 26, 2019

Shepherd, Lori Error package build Feb 26, 2019

[Bioc-devel] bpstart() bpstop() method error with SerialParam backend

2 msgs Feb 24

Yinan Zheng bpstart() bpstop() method error with SerialParam backend Feb 23, 2019

Martin Morgan bpstart() bpstop() method error with SerialParam backend Feb 24, 2019

[Bioc-devel] Unable to install database package in devel version of Bioconductor 3.9

2 msgs Feb 24

Yinan Zheng Unable to install database package in devel version of Bioconductor 3.9 Feb 22, 2019

Dario Strbenac Unable to install database package in devel version of Bioconductor 3.9 Feb 24, 2019

[Bioc-devel] devel version of "cbaf" seems to pass package test

2 msgs Feb 23

Arman Shahrisa devel version of "cbaf" seems to pass package test Feb 23, 2019

Shepherd, Lori devel version of "cbaf" seems to pass package test Feb 23, 2019

[Bioc-devel] List of Deprecated Package Bioc 3.9

1 msg Feb 22

Shepherd, Lori List of Deprecated Package Bioc 3.9 Feb 22, 2019

[Bioc-devel] package named spdeq causes error

3 msgs Feb 21

r04945002 m@iii@g oii @tu@edu@tw package named spdeq causes error Feb 21, 2019

Dario Strbenac package named spdeq causes error Feb 21, 2019

Levi Waldron package named spdeq causes error Feb 21, 2019

[Bioc-devel] mailing list sign up

4 msgs Feb 20

Lily Wang mailing list sign up Feb 19, 2019

Martin Morgan mailing list sign up Feb 19, 2019

Shepherd, Lori mailing list sign up Feb 20, 2019

lily.wangg mailing list sign up Feb 20, 2019

[Bioc-devel] Merging GInteraction/GenomicInteractions ranges

6 msgs Feb 20

Luke Klein Merging GInteraction/GenomicInteractions ranges Feb 12, 2019

Aaron Lun Merging GInteraction/GenomicInteractions ranges Feb 13, 2019

Shian Su Merging GInteraction/GenomicInteractions ranges Feb 14, 2019

Luke Klein Merging GInteraction/GenomicInteractions ranges Feb 19, 2019

Liz Ing-Simmons Merging GInteraction/GenomicInteractions ranges Feb 19, 2019

Aaron Lun Merging GInteraction/GenomicInteractions ranges Feb 20, 2019

[Bioc-devel] BioC2019 talk/workshop/scholarship submission deadline MARCH 15

1 msg Feb 19

Levi Waldron BioC2019 talk/workshop/scholarship submission deadline MARCH 15 Feb 19, 2019

[Bioc-devel] ensembl 95 gtfs and fasta twobits have been added to AnnotationHub

3 msgs Feb 19

Shepherd, Lori ensembl 95 gtfs and fasta twobits have been added to AnnotationHub Feb 15, 2019

David Jimenez-Morales How to suppress startup messages Feb 16, 2019

Martin Morgan How to suppress startup messages Feb 19, 2019

[Bioc-devel] Question about package dependency

3 msgs Feb 19

Xu Ren Question about package dependency Feb 19, 2019

Shepherd, Lori Question about package dependency Feb 19, 2019

Vincent Carey Question about package dependency Feb 19, 2019

[Bioc-devel] Single Package Builder

3 msgs Feb 19

Felix Ernst Single Package Builder Feb 18, 2019

Martin Morgan Single Package Builder Feb 18, 2019

Shepherd, Lori Single Package Builder Feb 19, 2019

[Bioc-devel] Virtual Symposium: Bioc / HCA 'Work in Progress'

1 msg Feb 18

Martin Morgan Virtual Symposium: Bioc / HCA 'Work in Progress' Feb 18, 2019

[Bioc-devel] Error xps on celaya2

3 msgs Feb 18

cstrato Error xps on celaya2 Feb 18, 2019

Martin Morgan Error xps on celaya2 Feb 18, 2019

cstrato Error xps on celaya2 Feb 18, 2019

[Bioc-devel] problem with documentation of setMethod with different signatures

3 msgs Feb 18

web working problem with documentation of setMethod with different signatures Feb 14, 2019

Martin Morgan problem with documentation of setMethod with different signatures Feb 14, 2019

web working problem with documentation of setMethod with different signatures Feb 18, 2019

[Bioc-devel] Build fails, bad description file?

2 msgs Feb 15

Casper Peters Build fails, bad description file? Feb 15, 2019

Shepherd, Lori Build fails, bad description file? Feb 15, 2019

[Bioc-devel] Maintainer email change

1 msg Feb 14

Turaga, Nitesh Maintainer email change Feb 14, 2019

[Bioc-devel] sgraw@kumc.edu is not associated with a maintainer of a Bioconductor package

2 msgs Feb 14

Stefan Graw sgraw@kumc.edu is not associated with a maintainer of a Bioconductor package Feb 14, 2019

Turaga, Nitesh sgraw@kumc.edu is not associated with a maintainer of a Bioconductor package Feb 14, 2019

[Bioc-devel] ddply causes error during R check

5 msgs Feb 14

web working ddply causes error during R check Feb 11, 2019

Mike Smith ddply causes error during R check Feb 12, 2019

Martin Morgan ddply causes error during R check Feb 12, 2019

web working ddply causes error during R check Feb 14, 2019

[Bioc-devel] GenomeInfoDb is breaking bumphunter

3 msgs Feb 13

Samuela Pollack GenomeInfoDb is breaking bumphunter Feb 13, 2019

Shepherd, Lori GenomeInfoDb is breaking bumphunter Feb 13, 2019

Samuela Pollack GenomeInfoDb is breaking bumphunter Feb 13, 2019

[Bioc-devel] Maintainer email change

2 msgs Feb 13

Khadija El Amrani Maintainer email change Feb 12, 2019

Turaga, Nitesh Maintainer email change Feb 13, 2019

[Bioc-devel] Package submission being slient for weeks

2 msgs Feb 12

Chengyang.Ji12 Package submission being slient for weeks Feb 12, 2019

Shepherd, Lori Package submission being slient for weeks Feb 12, 2019

[Bioc-devel] Pushing towards a better home for matrix generics

2 msgs Feb 11

McDavid, Andrew Pushing towards a better home for matrix generics Feb 11, 2019

Michael Lawrence Pushing towards a better home for matrix generics Feb 11, 2019

[Bioc-devel] Pushing towards a better home for matrix generics

1 msg Feb 10

Aaron Lun Pushing towards a better home for matrix generics Feb 10, 2019

[Bioc-devel] build/check reports and package version available for updated package

3 msgs Feb 10

Ramon Diaz-Uriarte build/check reports and package version available for updated package Feb 9, 2019

Hervé Pagès build/check reports and package version available for updated package Feb 9, 2019

Ramon Diaz-Uriarte build/check reports and package version available for updated package Feb 10, 2019

[Bioc-devel] Fwd: update bioconductor package

1 msg Feb 8

Minoo Ashtiani update bioconductor package Feb 8, 2019

[Bioc-devel] Fwd: update bioconductor package

1 msg Feb 8

Minoo Ashtiani update bioconductor package Feb 8, 2019

[Bioc-devel] update bioconductor package

3 msgs Feb 8

Minoo Ashtiani update bioconductor package Feb 8, 2019

Turaga, Nitesh update bioconductor package Feb 8, 2019

[Bioc-devel] Bioconductor git credentials

3 msgs Feb 7

Wagner, Jake Bioconductor git credentials Feb 6, 2019

Jiang, Mike Bioconductor git credentials Feb 6, 2019

Turaga, Nitesh Bioconductor git credentials Feb 7, 2019

[Bioc-devel] error pushing changes

3 msgs Feb 7

Marta Hidalgo error pushing changes Feb 6, 2019

Turaga, Nitesh error pushing changes Feb 6, 2019

Marta Hidalgo error pushing changes Feb 7, 2019

[Bioc-devel] Submission of packages located at within a repository

2 msgs Feb 6

Britta Velten Submission of packages located at within a repository Feb 4, 2019

Turaga, Nitesh Submission of packages located at within a repository Feb 6, 2019

[Bioc-devel] Help with Building Package in Rstudio

2 msgs Feb 4

Margaret Linan Help with Building Package in Rstudio Feb 3, 2019

Shepherd, Lori Help with Building Package in Rstudio Feb 4, 2019

[Bioc-devel] missing devel experiment data builds

2 msgs Jan 31

Hervé Pagès missing devel experiment data builds Jan 31, 2019

Charlotte Soneson missing devel experiment data builds Jan 31, 2019

Bioc-devel February 2019