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Bioc-devel July 2019

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"In Bioconductor since" date wrong

4 msgs
Neumann, Steffen "In Bioconductor since" date wrong Jul 29, 2019 Robert M. Flight "In Bioconductor since" date wrong Jul 29, 2019 Shepherd, Lori "In Bioconductor since" date wrong Jul 29, 2019 Robert M. Flight "In Bioconductor since" date wrong Jul 29, 2019

BSgenome.UCSC.hg38 seems to be deleted again on the build system

2 msgs
Paul Shannon BSgenome.UCSC.hg38 seems to be deleted again on the build system Jul 18, 2019 Shepherd, Lori BSgenome.UCSC.hg38 seems to be deleted again on the build system Jul 18, 2019

BioC packages - profileplyr

3 msgs
Doug Barrows BioC packages - profileplyr Jul 12, 2019 Vincent Carey BioC packages - profileplyr Jul 12, 2019 Michael Shapiro BioC packages - profileplyr Jul 12, 2019

Bioc credentials

2 msgs
Leo Lahti Bioc credentials Jul 31, 2019 Turaga, Nitesh Bioc credentials Jul 31, 2019

Bioconductor Technical Advisory Board nominations

1 msg
Martin Morgan Bioconductor Technical Advisory Board nominations Jul 15, 2019

Failing to get updated version of the package on Bioconductor

5 msgs
Hamed Haseli Failing to get updated version of the package on Bioconductor Jul 15, 2019 Shepherd, Lori Failing to get updated version of the package on Bioconductor Jul 15, 2019 Martin Morgan Failing to get updated version of the package on Bioconductor Jul 15, 2019 Shepherd, Lori Failing to get updated version of the package on Bioconductor Jul 15, 2019 Hamed Haseli Failing to get updated version of the package on Bioconductor Jul 15, 2019

Give person commit access to 'SBGNview'

5 msgs
dong xiaoxi Give person commit access to 'SBGNview' Jul 11, 2019 Luo Weijun Give person commit access to 'SBGNview' Jul 11, 2019 Turaga, Nitesh Give person commit access to 'SBGNview' Jul 11, 2019 Luo Weijun Give person commit access to 'SBGNview' Jul 11, 2019 Turaga, Nitesh Give person commit access to 'SBGNview' Jul 11, 2019

HiCBricks build error

4 msgs
Koustav Pal HiCBricks build error Jul 29, 2019 Koustav Pal HiCBricks build error Jul 29, 2019 Mike Smith HiCBricks build error Jul 30, 2019 Mike Smith HiCBricks build error Jul 30, 2019

I have access to someone else's library but not my own

2 msgs
Julie Sullivan I have access to someone else's library but not my own Jul 2, 2019 Julie Sullivan I have access to someone else's library but not my own Jul 2, 2019

No such file or directory: BSgenome.Hsapiens.UCSC.hg38/extdata/single_sequences.2bit

1 msg
Paul Shannon No such file or directory: BSgenome.Hsapiens.UCSC.hg38/extdata/single_sequences.2bit Jul 2, 2019

Package coverage

2 msgs
Lluís Revilla Package coverage Jul 11, 2019 Shepherd, Lori Package coverage Jul 11, 2019

Please add my email to the Bioconductor server

2 msgs
Theodore Killian Please add my email to the Bioconductor server Jul 15, 2019 Turaga, Nitesh Please add my email to the Bioconductor server Jul 16, 2019

Problems with MACPET package

9 msgs
Ioannis Vardaxis Problems with MACPET package Jul 8, 2019 Martin Morgan Problems with MACPET package Jul 8, 2019 Ioannis Vardaxis Problems with MACPET package Jul 12, 2019 Vincent Carey Problems with MACPET package Jul 12, 2019 Ioannis Vardaxis Problems with MACPET package Jul 15, 2019 Ioannis Vardaxis Problems with MACPET package Jul 17, 2019 Martin Morgan Problems with MACPET package Jul 17, 2019 Ioannis Vardaxis Problems with MACPET package Jul 29, 2019 Shepherd, Lori Problems with MACPET package Jul 29, 2019

Protection stack overflow

1 msg
Ivana Ihnatová Protection stack overflow Jul 22, 2019

Python Z trees to hclust

1 msg
Bernat Gel Python Z trees to hclust Jul 30, 2019

SingleCellExperiment refactoring

1 msg
Aaron Lun SingleCellExperiment refactoring Jul 21, 2019

Software package dependency >=5Mb in size

2 msgs
Shraddha Pai Software package dependency >=5Mb in size Jul 29, 2019 Martin Morgan Software package dependency >=5Mb in size Jul 29, 2019

Updated OrgDb packages

1 msg
Van Twisk, Daniel Updated OrgDb packages Jul 16, 2019

Using BioC vignettes as Jupyter Notebooks

3 msgs
Neumann, Steffen Using BioC vignettes as Jupyter Notebooks Jul 2, 2019 Martin Morgan Using BioC vignettes as Jupyter Notebooks Jul 2, 2019 Neumann, Steffen Using BioC vignettes as Jupyter Notebooks Jul 2, 2019

Using my own genome for CAGER

2 msgs
Jaehyun Lee Using my own genome for CAGER Jul 29, 2019 James W. MacDonald Using my own genome for CAGER Jul 29, 2019

banocc: Bioconductor BUILD error

4 msgs
George Weingart banocc: Bioconductor BUILD error Jul 15, 2019 Shepherd, Lori banocc: Bioconductor BUILD error Jul 15, 2019 George Weingart banocc: Bioconductor BUILD error Jul 15, 2019 George Weingart banocc: Bioconductor BUILD error Jul 15, 2019

erro in package build

1 msg
Claudio Isella erro in package build Jul 16, 2019

patch old releases? e.g. RELEASE_3_8

3 msgs
Ashley Waardenberg patch old releases? e.g. RELEASE_3_8 Jul 11, 2019 Dario Strbenac patch old releases? e.g. RELEASE_3_8 Jul 11, 2019 Turaga, Nitesh patch old releases? e.g. RELEASE_3_8 Jul 12, 2019

tokay1 C++14 compiler

9 msgs
Simo Kitanovski tokay1 C++14 compiler Jul 25, 2019 Kasper Daniel Hansen tokay1 C++14 compiler Jul 25, 2019 Martin Morgan tokay1 C++14 compiler Jul 25, 2019 Simo Kitanovski tokay1 C++14 compiler Jul 25, 2019 Kasper Daniel Hansen tokay1 C++14 compiler Jul 29, 2019 Simo Kitanovski tokay1 C++14 compiler Jul 29, 2019 Kasper Daniel Hansen tokay1 C++14 compiler Jul 30, 2019 Hervé Pagès tokay1 C++14 compiler Jul 31, 2019 Simo Kitanovski tokay1 C++14 compiler Jul 31, 2019