Skip to content

Bioc-devel July 2020

|
[Bioc-devel] Package submission with strong external dependency during build/check [take 2]
3 msgs
Régis Ongaro-Carcy Package submission with strong external dependency during build/check [take 2] Jul 16, 2020
Martin Morgan Package submission with strong external dependency during build/check [take 2] Jul 16, 2020
Régis Ongaro-Carcy Package submission with strong external dependency during build/check [take 2] Jul 31, 2020
[Bioc-devel] Possible problems with BiocParallel and R cmd check on Github
2 msgs
Henrik Bengtsson Possible problems with BiocParallel and R cmd check on Github Jul 30, 2020
Giulia Pais Possible problems with BiocParallel and R cmd check on Github Jul 30, 2020
[Bioc-devel] Possible problems with BiocParallel and R cmd check on Github
2 msgs
Giulia Pais Possible problems with BiocParallel and R cmd check on Github Jul 29, 2020
Henrik Bengtsson Possible problems with BiocParallel and R cmd check on Github Jul 29, 2020
[Bioc-devel] VariantAnnotation::readVcf() sets the wrong seqlevelsStyle in devel
1 msg
Robert Castelo VariantAnnotation::readVcf() sets the wrong seqlevelsStyle in devel Jul 29, 2020
[Bioc-devel] Bioc-issue-bot not acknowledging a submitted package
2 msgs
Tim Nieuwenhuis Bioc-issue-bot not acknowledging a submitted package Jul 28, 2020
Shepherd, Lori Bioc-issue-bot not acknowledging a submitted package Jul 29, 2020
[Bioc-devel] A pie in the sky idea/wish: DifferentialExpressionSummarizedExperiment clas
1 msg
Leonardo Collado Torres A pie in the sky idea/wish: DifferentialExpressionSummarizedExperiment clas Jul 28, 2020
[Bioc-devel] msa: call for help/support
1 msg
Ulrich Bodenhofer msa: call for help/support Jul 28, 2020
[Bioc-devel] networkBMA package
2 msgs
Ka Yee Yeung networkBMA package Jul 26, 2020
Shepherd, Lori networkBMA package Jul 27, 2020
[Bioc-devel] BiocCheck space indentation in Rmakrdown vignette documents
5 msgs
Carlos A. Catania (AKA Harpo) BiocCheck space indentation in Rmakrdown vignette documents Jul 23, 2020
Mike Smith BiocCheck space indentation in Rmakrdown vignette documents Jul 25, 2020
Martin Morgan BiocCheck space indentation in Rmakrdown vignette documents Jul 26, 2020
Carlos A. Catania (AKA Harpo) BiocCheck space indentation in Rmakrdown vignette documents Jul 27, 2020
Carlos A. Catania (AKA Harpo) BiocCheck space indentation in Rmakrdown vignette documents Jul 27, 2020
[Bioc-devel] build error on EnMCB package
1 msg
xin wwa build error on EnMCB package Jul 23, 2020
[Bioc-devel] immunoClust e-mail contact will change
2 msgs
Sörensen, Till Antoni immunoClust e-mail contact will change Jul 13, 2020
Nitesh Turaga immunoClust e-mail contact will change Jul 21, 2020
[Bioc-devel] Resource temporarily unavailable error with rtracklayer
5 msgs
Charles Plessy Resource temporarily unavailable error with rtracklayer Jul 14, 2020
Vincent Carey Resource temporarily unavailable error with rtracklayer Jul 14, 2020
Charles Plessy Resource temporarily unavailable error with rtracklayer Jul 14, 2020
Charles Plessy Resource temporarily unavailable error with rtracklayer Jul 19, 2020
Michael Lawrence Resource temporarily unavailable error with rtracklayer Jul 20, 2020
[Bioc-devel] Triggering a new build
7 msgs
Spiro Stilianoudakis Triggering a new build Jul 16, 2020
Nitesh Turaga Triggering a new build Jul 16, 2020
Shepherd, Lori Triggering a new build Jul 16, 2020
Nitesh Turaga Triggering a new build Jul 16, 2020
Fernando Pérez Sanz New version in tscR doesn't trigger new build Jul 16, 2020
Shepherd, Lori New version in tscR doesn't trigger new build Jul 17, 2020
Fernando Pérez Sanz New version in tscR doesn't trigger new build Jul 20, 2020
[Bioc-devel] Bioconductor / Human Cell Atlas mini-symposium today 3pm US Eastern time!
1 msg
Martin Morgan Bioconductor / Human Cell Atlas mini-symposium today 3pm US Eastern time! Jul 20, 2020
[Bioc-devel] providerVersion error with BSgenome genomes
4 msgs
Diego Diez providerVersion error with BSgenome genomes Jul 15, 2020
Diego Diez providerVersion error with BSgenome genomes Jul 17, 2020
Diego Diez providerVersion error with BSgenome genomes Jul 17, 2020
Diego Diez providerVersion error with BSgenome genomes Jul 18, 2020
[Bioc-devel] Error when index duplicate rows in SummarizedExperiment -- is this a bug?
1 msg
Elizabeth Purdom Error when index duplicate rows in SummarizedExperiment -- is this a bug? Jul 17, 2020
[Bioc-devel] No access to dorothea package
2 msgs
Christian Holland No access to dorothea package Jul 17, 2020
Nitesh Turaga No access to dorothea package Jul 17, 2020
[Bioc-devel] Package submission with strong external dependency during build/check
1 msg
Régis Ongaro-Carcy Package submission with strong external dependency during build/check Jul 15, 2020
[Bioc-devel] rename a package
1 msg
Nitesh Turaga rename a package Jul 13, 2020
[Bioc-devel] rename a package
2 msgs
Estefania Mancini rename a package Jul 13, 2020
Nitesh Turaga rename a package Jul 13, 2020
[Bioc-devel] d3heatmap dependency error
5 msgs
S Manimaran d3heatmap dependency error Jul 11, 2020
Martin Morgan d3heatmap dependency error Jul 12, 2020
Sean Davis d3heatmap dependency error Jul 12, 2020
S Manimaran d3heatmap dependency error Jul 12, 2020
S Manimaran d3heatmap dependency error Jul 12, 2020
[Bioc-devel] New Package Submission Workflow Updates!
3 msgs
Shepherd, Lori New Package Submission Workflow Updates! Jul 8, 2020
Lluís Revilla New Package Submission Workflow Updates! Jul 8, 2020
Martin Morgan New Package Submission Workflow Updates! Jul 10, 2020
[Bioc-devel] Changing Package Maintainer
4 msgs
Chris Eeles Changing Package Maintainer Jul 6, 2020
Nitesh Turaga Changing Package Maintainer Jul 8, 2020
Chris Eeles Changing Package Maintainer Jul 8, 2020
Nitesh Turaga Changing Package Maintainer Jul 8, 2020
[Bioc-devel] Maintenance on new package contributions and git hooks
2 msgs
Turaga, Nitesh Maintenance on new package contributions and git hooks Jul 1, 2020
Turaga, Nitesh Maintenance on new package contributions and git hooks Jul 8, 2020
[Bioc-devel] Bioconductor Developers Forum - Thursday 16th July
1 msg
Mike Smith Bioconductor Developers Forum - Thursday 16th July Jul 7, 2020
[Bioc-devel] Unable to replicate Windows build error on new package.
4 msgs
Erik Christensen Unable to replicate Windows build error on new package. Jul 3, 2020
Shepherd, Lori Unable to replicate Windows build error on new package. Jul 6, 2020
Erik Christensen Unable to replicate Windows build error on new package. Jul 7, 2020
Shepherd, Lori Unable to replicate Windows build error on new package. Jul 7, 2020
[Bioc-devel] bsGenomeName(BSgenomeObject) disappeared in bioc-devel?
8 msgs
Bhagwat, Aditya bsGenomeName(BSgenomeObject) disappeared in bioc-devel? Jul 7, 2020
Bhagwat, Aditya bsGenomeName(BSgenomeObject) disappeared in bioc-devel? Jul 7, 2020
Bhagwat, Aditya bsGenomeName(BSgenomeObject) disappeared in bioc-devel? Jul 7, 2020
Hervé Pagès bsGenomeName(BSgenomeObject) disappeared in bioc-devel? Jul 7, 2020
Bhagwat, Aditya bsGenomeName(BSgenomeObject) disappeared in bioc-devel? Jul 7, 2020
Hervé Pagès bsGenomeName(BSgenomeObject) disappeared in bioc-devel? Jul 7, 2020
Hervé Pagès bsGenomeName(BSgenomeObject) disappeared in bioc-devel? Jul 7, 2020
Bhagwat, Aditya bsGenomeName(BSgenomeObject) disappeared in bioc-devel? Jul 7, 2020
[Bioc-devel] ccfindR install fails
1 msg
Manders-2, F.M. ccfindR install fails Jul 6, 2020
[Bioc-devel] AnnotationHubData -> rBiopaxParser -> nem dependency issue
1 msg
Felix Ernst AnnotationHubData -> rBiopaxParser -> nem dependency issue Jul 4, 2020
[Bioc-devel] proposal for additional seqlevelsStyle
3 msgs
Hervé Pagès proposal for additional seqlevelsStyle Jul 2, 2020
Michael Love proposal for additional seqlevelsStyle Jul 3, 2020
Robert Castelo proposal for additional seqlevelsStyle Jul 3, 2020