Bioc-devel February 2023

Thread Subject Author Date

48 messages in 18 threads

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Bioconductor 3.17 requires R 4.3?

4 msgs · Feb 24 – Feb 24

Y-h. Taguchi Bioconductor 3.17 requires R 4.3? Feb 24, 2023 Lluís Revilla Bioconductor 3.17 requires R 4.3? Feb 24, 2023 Y-h. Taguchi Bioconductor 3.17 requires R 4.3? Feb 24, 2023 Shepherd, Lori Bioconductor 3.17 requires R 4.3? Feb 24, 2023

Build error - Latex environment in vignettes

2 msgs · Feb 26 – Feb 27

Sergio Picart Armada Build error - Latex environment in vignettes Feb 26, 2023 Jennifer Wokaty Build error - Latex environment in vignettes Feb 27, 2023

Cannot push to BioC git repo

8 msgs · Feb 20 – Feb 21

Ulrich Bodenhofer Cannot push to BioC git repo Feb 20, 2023 Ulrich Bodenhofer Cannot push to BioC git repo Feb 20, 2023 Martin Grigorov Cannot push to BioC git repo Feb 20, 2023 Daniel, Dimitrov Cannot push to BioC git repo Feb 21, 2023 Shepherd, Lori Cannot push to BioC git repo Feb 21, 2023 Shepherd, Lori Cannot push to BioC git repo Feb 21, 2023 Shepherd, Lori Cannot push to BioC git repo Feb 21, 2023 Ulrich Bodenhofer Cannot push to BioC git repo Feb 21, 2023

GRridge problems reported in the Multiple platform build/check report for BioC 3.17

2 msgs · Feb 14 – Feb 16

Wiel, M.A. van de (Mark) GRridge problems reported in the Multiple platform build/check report for BioC 3.17 Feb 14, 2023 Shepherd, Lori GRridge problems reported in the Multiple platform build/check report for BioC 3.17 Feb 16, 2023

Installation of XCMS on R

3 msgs · Feb 23 – Feb 23

insaf ben Installation of XCMS on R Feb 23, 2023 Shepherd, Lori Installation of XCMS on R Feb 23, 2023 Vincent Carey Installation of XCMS on R Feb 23, 2023

Issue with setting Maintainer in new package submission

4 msgs · Feb 22 – Feb 23

Andrew Wight Issue with setting Maintainer in new package submission Feb 22, 2023 Mike Smith Issue with setting Maintainer in new package submission Feb 22, 2023 Shepherd, Lori Issue with setting Maintainer in new package submission Feb 23, 2023 Andrew Wight Issue with setting Maintainer in new package submission Feb 23, 2023

Java version on merida1?

2 msgs · Feb 22 – Feb 22

Shraddha Pai Java version on merida1? Feb 22, 2023 Jennifer Wokaty Java version on merida1? Feb 22, 2023

MOSim package: change of maintainer

2 msgs · Feb 20 – Feb 21

Sonia Tarazona MOSim package: change of maintainer Feb 20, 2023 Shepherd, Lori MOSim package: change of maintainer Feb 21, 2023

News: BioC2023 abstract submission is now open!

1 msg · Feb 7

Maria.Doyle News: BioC2023 abstract submission is now open! Feb 7, 2023

News: Bioconductor call for events!

1 msg · Feb 24

Maria.Doyle News: Bioconductor call for events! Feb 24, 2023

Openssl is not available in netConnectHttps for importing remote BigWig files

1 msg · Feb 23

Leonardo Collado Torres Openssl is not available in netConnectHttps for importing remote BigWig files Feb 23, 2023

Question on prospective Bioc package

4 msgs · Feb 17 – Feb 22

Flanigan, Greg (NIH/NCI) [C] Question on prospective Bioc package Feb 17, 2023 Wolfgang Huber Question on prospective Bioc package Feb 22, 2023 SUTIRTHA CHAKRABORTY Question on prospective Bioc package Feb 22, 2023 Flanigan, Greg (NIH/NCI) [C] Question on prospective Bioc package Feb 22, 2023

TiSA awaiting moderation - 1 month

2 msgs · Feb 7 – Feb 7

Yohan Lefol TiSA awaiting moderation - 1 month Feb 7, 2023 Shepherd, Lori TiSA awaiting moderation - 1 month Feb 7, 2023

Trouble modifying read-only ChipDb SQLite database

1 msg · Feb 22

Amanda Hiser Trouble modifying read-only ChipDb SQLite database Feb 22, 2023

data experiment, workflow, and book pushes to git.bioconductor.org

1 msg · Feb 17

Shepherd, Lori data experiment, workflow, and book pushes to git.bioconductor.org Feb 17, 2023

libsbml and libxml2 on palomino3 BBS

1 msg · Feb 27

Ahmed Mohamed libsbml and libxml2 on palomino3 BBS Feb 27, 2023

name for new BioC package

7 msgs · Feb 3 – Feb 10

Matteo Tiberti name for new BioC package Feb 3, 2023 Laurent Gatto name for new BioC package Feb 3, 2023 Hervé Pagès name for new BioC package Feb 3, 2023 Kevin Coombes name for new BioC package Feb 4, 2023 Matteo Tiberti name for new BioC package Feb 7, 2023 Martin Morgan name for new BioC package Feb 7, 2023 Wolfgang Huber name for new BioC package Feb 10, 2023

updating pathwayPCA: "permission denied (publickey)"

2 msgs · Feb 9 – Feb 9

Gabriel Odom updating pathwayPCA: "permission denied (publickey)" Feb 9, 2023 James W. MacDonald updating pathwayPCA: "permission denied (publickey)" Feb 9, 2023