Bioc-devel March 2025
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Monday, March 31, 2025 8 emails
RAN HU
Build error for cfTools
Shepherd, Lori
Build error for cfTools
RAN HU
Build error for cfTools
Shepherd, Lori
Release_3_20 branch is now frozen
Martin Maechler
Author ORCID IDs on package landing pages
Shepherd, Lori
RELEASE_3_20 frozen in a few hours
Shepherd, Lori
Add second maintainer for strandCheckR
Shepherd, Lori
List of Deprecated Packages for Bioc3.21
Sunday, March 30, 2025 1 email
Saturday, March 29, 2025 1 email
Friday, March 28, 2025 2 emails
Thursday, March 27, 2025 8 emails
Gordon K Smyth
Author ORCID IDs on package landing pages
Gordon K Smyth
Author ORCID IDs on package landing pages
Samuel Granjeaud IR/Inserm
segmentSeq problems reported for BioC 3.20 but not BioC 3.21: is there a need to change the code?
Robert Castelo
mail notification support forum stopped
Shepherd, Lori
List of Deprecated Packages for Bioc3.21
Martin Grigorov
Package Installation Fails on Linux Kunpeng2 Due to ‘concaveman’ and ‘sf’ Dependencies
Martin Grigorov
Package Installation Fails on Linux Kunpeng2 Due to ‘concaveman’ and ‘sf’ Dependencies
Martin Grigorov
Package Installation Fails on Linux Kunpeng2 Due to ‘concaveman’ and ‘sf’ Dependencies
Wednesday, March 26, 2025 5 emails
Martin Grigorov
Package Installation Fails on Linux Kunpeng2 Due to ‘concaveman’ and ‘sf’ Dependencies
Jing Fu
Package Installation Fails on Linux Kunpeng2 Due to ‘concaveman’ and ‘sf’ Dependencies
Shepherd, Lori
Important Release Deadline RELEASE_3_20 Freeze and API Feature Freeze of devel
James W. MacDonald
mail notification support forum stopped
Hooiveld, Guido
mail notification support forum stopped
Tuesday, March 25, 2025 5 emails
Luca Lepore
failing with non-reproducible error "no slot of name "name" for this object of class "pEdge"" from Rgraphviz
James W. MacDonald
failing with non-reproducible error "no slot of name "name" for this object of class "pEdge"" from Rgraphviz
Hervé Pagès
failing with non-reproducible error "no slot of name "name" for this object of class "pEdge"" from Rgraphviz
Tulip Nandu
groHMM Bioconductor
Maria.Doyle
GBCC2025: Upcoming Deadlines for Early Bird Registration, Abstract Submission, and Scholarships
Monday, March 24, 2025 5 emails
Andrew McDavid
failing with non-reproducible error "no slot of name "name" for this object of class "pEdge"" from Rgraphviz
Andrew McDavid
failing with non-reproducible error "no slot of name "name" for this object of class "pEdge"" from Rgraphviz
Kasper Daniel Hansen
failing with non-reproducible error "no slot of name "name" for this object of class "pEdge"" from Rgraphviz
Shepherd, Lori
Add second maintainer for limpa package
Andrew McDavid
failing with non-reproducible error "no slot of name "name" for this object of class "pEdge"" from Rgraphviz
Sunday, March 23, 2025 1 email
Saturday, March 22, 2025 1 email
Friday, March 21, 2025 1 email
Thursday, March 20, 2025 3 emails
Wednesday, March 19, 2025 5 emails
Sean Davis
Bioconductor archive?
Lluís Revilla
Bioconductor archive?
Ramon Diaz-Uriarte
failing with non-reproducible error "no slot of name "name" for this object of class "pEdge"" from Rgraphviz
Robert Castelo
failing with non-reproducible error "no slot of name "name" for this object of class "pEdge"" from Rgraphviz
Luca Lepore
failing with non-reproducible error "no slot of name "name" for this object of class "pEdge"" from Rgraphviz
Tuesday, March 18, 2025 9 emails
Meriem Bahda
New version of rmspc - error
Meriem Bahda
New version of rmspc - error
Leonardo Collado Torres
Readme in Rmd and md formats; .Rbuildignore'd files
Kasper Daniel Hansen
failing with non-reproducible error "no slot of name "name" for this object of class "pEdge"" from Rgraphviz
Andres Wokaty
New version of rmspc - error
Charlotte Soneson
EBSeq Installation Error – C++ Version Update
Katja Danielzik
C++ compiler error on kunpeng2 ?
Robert Castelo
failing with non-reproducible error "no slot of name "name" for this object of class "pEdge"" from Rgraphviz
Jonas Schuck
BiocParallel Error in SingleCellAlleleExperiment on palomino7/8
Monday, March 17, 2025 7 emails
Shepherd, Lori
Important Bioconductor Release Deadlines
xiuyu
EBSeq Installation Error – C++ Version Update
Kasper Daniel Hansen
failing with non-reproducible error "no slot of name "name" for this object of class "pEdge"" from Rgraphviz
Martin Grigorov
New version of rmspc - error
Shepherd, Lori
Important Bioconductor Release Deadlines
Shepherd, Lori
Adding new maintainer to package TFEA.ChIP
Shepherd, Lori
Bioconductor archive?
Sunday, March 16, 2025 2 emails
Saturday, March 15, 2025 3 emails
Friday, March 14, 2025 4 emails
Marcel Ramos
Readme in Rmd and md formats; .Rbuildignore'd files
Shepherd, Lori
Adding new maintainer to package TFEA.ChIP
Lluís Revilla
Readme in Rmd and md formats; .Rbuildignore'd files
Robert Castelo
failing with non-reproducible error "no slot of name "name" for this object of class "pEdge"" from Rgraphviz
Thursday, March 13, 2025 5 emails
Scott McLoud
Microshades: Appropriate for BioConductor
Kasper Daniel Hansen
failing with non-reproducible error "no slot of name "name" for this object of class "pEdge"" from Rgraphviz
Robert Castelo
failing with non-reproducible error "no slot of name "name" for this object of class "pEdge"" from Rgraphviz
Shepherd, Lori
New version of rmspc - error
Laura Puente Santamaría
Adding new maintainer to package TFEA.ChIP
Wednesday, March 12, 2025 1 email
Tuesday, March 11, 2025 5 emails
Marcel Ramos
Readme in Rmd and md formats; .Rbuildignore'd files
Shepherd, Lori
Bioconductor 3.21 db0s, OrgDbs, and TxDbs now available
Shepherd, Lori
Important Bioconductor Release Deadlines
Martha M
Readme in Rmd and md formats; .Rbuildignore'd files
Leonardo Collado Torres
Readme in Rmd and md formats; .Rbuildignore'd files
Monday, March 10, 2025 5 emails
Friday, March 7, 2025 1 email
Thursday, March 6, 2025 4 emails
Ramon Diaz-Uriarte
failing with non-reproducible error "no slot of name "name" for this object of class "pEdge"" from Rgraphviz
Alexander Blume
How to provide hotfix for current release
Shepherd, Lori
How to provide hotfix for current release
Shepherd, Lori
Error during download data by GDCquery_clinic
Wednesday, March 5, 2025 2 emails
Tuesday, March 4, 2025 2 emails
Monday, March 3, 2025 8 emails
Andres Wokaty
Rust compilation environment in Bioconductor
Sun Wenjie
Rust compilation environment in Bioconductor
Alexander Blume
How to provide hotfix for current release
Shepherd, Lori
Issue with devel package
Shreyan Gupta
Issue with devel package
James W. MacDonald
How to provide hotfix for current release
Alexander Blume
How to provide hotfix for current release
Jarosław Sikora
Error during download data by GDCquery_clinic