[Bioc-devel] remove history vignettes

Well, You shouldn't expect the release branches to change at all based on
anything you do on trunk. They never will.

The release branch is (almost completely frozen), you shouldn't be making
changes there generally. Changes in documentation are a grey area, I
suppose, but I try to avoid those as well. Basically, once released the
package should be "as-is", and exactly the same for all people using it at
any point in that release cycle.

I'm not sure why the vignettes are still there on the devel landing page if
you have in fact bumped the package version in svn though. That likely
comes down to exactly how those splash pages are generated, which I don't
know.

Best,
~G

On Tue, Nov 17, 2015 at 8:23 AM, ??? <jokergoo at gmail.com> wrote:

Thanks for your reply! I have already updated the package (also with
bumping version numbers) for many times but these old vignettes are still
there. They even exist in the release branch:
http://www.bioconductor.org/packages/release/bioc/html/ComplexHeatmap.html


On Tue, Nov 17, 2015 at 3:44 PM, Gabe Becker <becker.gabe at gene.com> wrote:

Zuguang,

From what I can see, you have not updated the version number of your
package, so I suspect you'll find that none of your changes have propogated
at all, though I can't entirely swear to that.

I believe Bioc packages only update in the repo (which I assume is also
when the splash-pages are updated) upon version bump.

~G

On Tue, Nov 17, 2015 at 4:35 AM, ??? <jokergoo at gmail.com> wrote:

Hi,

I am developing a package called ComplexHeatmap and re-format the
vignettes
recently. I deleted the old vignettes and created several new vignettes.
But when I look at the web page of the package (
http://bioconductor.org/packages/devel/bioc/html/ComplexHeatmap.html),
the
old vignette files (the bottom three vignettes) are still there but they
are already removed in svn
(

https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/ComplexHeatmap/vignettes/
)

I guess it may because some rules of svn but I am not experienced for
this
and I commit changes through github mirror. I want to remove the bottom
three vignettes which start without numbers ("Making Complex Heatmap",
and
the two "Quick Examples of Making Complex Heatmaps"). Can anyone give
some
clue how to do this?

Thanks!
Zuguang

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--
Gabriel Becker, Ph.D
Associate Scientist
Bioinformatics and Computational Biology
Genentech Research

--
Gabriel Becker, Ph.D
Associate Scientist
Bioinformatics and Computational Biology
Genentech Research

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