Skip to content
Prev 7011 / 21312 Next
Original Raw

[Bioc-devel] Feature Request--add host and port to makeTxDbPackageFromBiomart

Sean Davis 
Hi, Marc.

Since Ensembl has switched to GRCh38 for their most recent builds, to get
access to GRCh37 data now requires a different host and port for biomaRt.
These are exposed in the makeTxDbFromBiomart, but not the accompanying
functionality to directly make a package.  Would it make sense to add host
and port as arguments for the latter?

Thanks,
Sean

Thread (2 messages)

Sean Davis Feature Request--add host and port to makeTxDbPackageFromBiomart Feb 27 Marc Carlson Feature Request--add host and port to makeTxDbPackageFromBiomart Feb 27