[Bioc-devel] CHECK ERROR in tokay1 for BioC 3.10

It looks like for arch'x64', there is no package org.Hs.eg.db.

Following is the whole error message:

** running examples for arch 'i386' ... OK
Examples with CPU or elapsed time > 5s
                     user system elapsed
trackViewer-package 22.44   0.07   24.88
viewTracks          13.97   0.02   14.84
parseWIG            12.81   0.00   12.94
browseTracks        12.04   0.00   12.69
geneModelFromTxdb    7.30   0.31    9.28
viewGene             5.15   0.11    5.26
** running examples for arch 'x64' ... ERROR
Running examples in 'trackViewer-Ex.R' failed
The error most likely occurred in:

base::assign(".ptime", proc.time(), pos = "CheckExEnv")
### Name: trackViewer-package
### Title: Minimal designed plotting tool for genomic data
### Aliases: trackViewer trackViewer-package

### ** Examples

library(TxDb.Hsapiens.UCSC.hg19.knownGene)

Loading required package: GenomicFeatures
Loading required package: AnnotationDbi
Loading required package: Biobase
Welcome to Bioconductor

    Vignettes contain introductory material; view with
    'browseVignettes()'. To cite Bioconductor, see
    'citation("Biobase")', and for packages 'citation("pkgname")'.

library(org.Hs.eg.db)

Error in library(org.Hs.eg.db) : 
  there is no package called 'org.Hs.eg.db'
Execution halted



?On 6/14/19, 9:31 AM, "Bioc-devel on behalf of Jianhong Ou, Ph.D." <bioc-devel-bounces at r-project.org on behalf of jianhong.ou at duke.edu> wrote:

    It is for a long time. Since last development version (BioC 3.9).
    
    Jianhong.
    
    From: "Shepherd, Lori" <Lori.Shepherd at RoswellPark.org>
    Date: Friday, June 14, 2019 at 9:29 AM
    To: "Jianhong Ou, Ph.D." <jianhong.ou at duke.edu>, Michael Lawrence via Bioc-devel <bioc-devel at r-project.org>
    Subject: Re: CHECK ERROR in tokay1 for BioC 3.10
    
    
    How long as this ERROR occurred?
    
    I just went onto tokay1 and was able to run library("org.Hs.eg.db")  with no issues.   Let's wait and see if it clears up on todays build report.  If not we will investigate further.
    
    
    
    Lori Shepherd
    
    Bioconductor Core Team
    
    Roswell Park Cancer Institute
    
    Department of Biostatistics & Bioinformatics
    
    Elm & Carlton Streets
    
    Buffalo, New York 14263

Hi,
    
    The package trackViewer get check error in tokay1 (windows) say:
    
    Error in library(org.Hs.eg.db) :
      there is no package called 'org.Hs.eg.db'
    
    How could I debug this error? Thank you for your help.
    
    Yours Sincerely,
    
    Jianhong Ou
    
    
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