Bioc-devel June 2019
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Sunday, June 30, 2019 2 emails
Thursday, June 27, 2019 2 emails
Wednesday, June 26, 2019 2 emails
Tuesday, June 25, 2019 7 emails
Aaron Lun
package test failing due to CSAW
dong xiaoxi
SBGNview package build error: data package not available. (SBGNview.data not in build/check results)
Hervé Pagès
SBGNview package build error: data package not available. (SBGNview.data not in build/check results)
Shepherd, Lori
Error No internet connection using 'localHub=TRUE' during FlowSorted.CordBloodCombined.450k package installation
Shepherd, Lori
SBGNview package build error: data package not available. (SBGNview.data not in build/check results)
Vincent Carey
banocc problems reported in the Multiple platform build/check report for BioC 3.9
Vivek Bhardwaj
package test failing due to CSAW
Monday, June 24, 2019 6 emails
Hervé Pagès
CHECK ERROR in tokay1 for BioC 3.10
George Weingart
banocc problems reported in the Multiple platform build/check report for BioC 3.9
Hervé Pagès
No such file or directory: BSgenome.Hsapiens.UCSC.hg38/extdata/single_sequences.2bit
Paul Shannon
No such file or directory: BSgenome.Hsapiens.UCSC.hg38/extdata/single_sequences.2bit
Lucas A. Salas Diaz
Error No internet connection using 'localHub=TRUE' during FlowSorted.CordBloodCombined.450k package installation
Benjamin Tremblay
LaTeX errors when creating PDF version [tokay1]
Sunday, June 23, 2019 1 email
Tuesday, June 18, 2019 7 emails
Dario Strbenac
how to achieve reproducibility with BiocParallel regardless of number of threads and OS (set.seed is disallowed)
Paul Shannon
Error in .seqlengths_TwoBitFile(x) : UCSC library operation failed
Gordon K Smyth
Error for voom() in limma package
Zhu, Lihua (Julie)
help with accessing CRISPRseek
Zhu, Lihua (Julie)
help with accessing CRISPRseek
James W. MacDonald
Error for voom() in limma package
Lan Huong Nguyen
Error for voom() in limma package
Monday, June 17, 2019 6 emails
Friday, June 14, 2019 14 emails
Shraddha Pai
get_dcf_info failed and build intervals
Hervé Pagès
get_dcf_info failed and build intervals
Shraddha Pai
get_dcf_info failed and build intervals
Hervé Pagès
get_dcf_info failed and build intervals
Shraddha Pai
get_dcf_info failed and build intervals
Hervé Pagès
get_dcf_info failed and build intervals
Shraddha Pai
get_dcf_info failed and build intervals
Turaga, Nitesh
updating package
ostrov@i m@iii@g oii mskcc@org
updating package
Shepherd, Lori
CHECK ERROR in tokay1 for BioC 3.10
Jianhong Ou, Ph.D.
CHECK ERROR in tokay1 for BioC 3.10
Jianhong Ou, Ph.D.
CHECK ERROR in tokay1 for BioC 3.10
Shepherd, Lori
CHECK ERROR in tokay1 for BioC 3.10
Aaron Lun
scRNAseq upgrade: give us your single-cell data!
Thursday, June 13, 2019 4 emails
Wednesday, June 12, 2019 4 emails
Hervé Pagès
normalize_names_replacement_value error with colnames<- on SummarizedExperiment
Vincent Carey
normalize_names_replacement_value error with colnames<- on SummarizedExperiment
Vincent Carey
normalize_names_replacement_value error with colnames<- on SummarizedExperiment
Ramon Diaz-Uriarte
package that will not build under Windows with Rtools35 (but works with Rtools40)
Tuesday, June 11, 2019 7 emails
Hervé Pagès
package that will not build under Windows with Rtools35 (but works with Rtools40)
Hervé Pagès
error regarding splitAsList from IRanges packages
Hervé Pagès
new error with saved HDF5SummarizedExperiment
Leonardo Collado Torres
Event addition request: CDSB Workshop 2019 in Cuernavaca, Mexico
Martin Morgan
Best way to locally troubleshoot Malbec, Tokay, or Merida build errors
Odom, Gabriel J
Best way to locally troubleshoot Malbec, Tokay, or Merida build errors
Shepherd, Lori
Event addition request: CDSB Workshop 2019 in Cuernavaca, Mexico
Monday, June 10, 2019 4 emails
Sunday, June 9, 2019 5 emails
Friday, June 7, 2019 7 emails
Vincent Carey
new error with saved HDF5SummarizedExperiment
Felix Ernst
error regarding splitAsList from IRanges packages
Shepherd, Lori
BioC 3.10 build report shapshot is stacked on Tuesday 04 Jun
Shepherd, Lori
verification on configuration
Nicolas Descostes
verification on configuration
Shepherd, Lori
List of Deprecated Packages Bioc 3.10
Carmen M. Livi
BioC 3.10 build report shapshot is stacked on Tuesday 04 Jun