[Bioc-devel] failing with non-reproducible error "no slot of name "name" for this object of class "pEdge"" from Rgraphviz
Dear All, A package I maintain, OncoSimulR, is failing in all platforms with Error: processing vignette 'OncoSimulR.Rmd' failed with diagnostics: no slot of name "name" for this object of class "pEdge" (https://bioconductor.org/checkResults/3.21/bioc-LATEST/OncoSimulR/kunpeng2-buildsrc.html) However, using the latest Rgraphviz source package, 2.51.1, and R-devel from 2025-02-20 (r87772) on Linux, with all dependencies up to date, I am unable to reproduce the error, either running R CMD build or just executing the supposedly problematic code. Interestingly, at least four other packages that depend on Rgraphviz seem to be failing with the same error: - CellNOptR: https://bioconductor.org/checkResults/3.21/bioc-LATEST/CellNOptR/nebbiolo1-buildsrc.html - CytoML: https://bioconductor.org/checkResults/3.21/bioc-LATEST/CytoML/nebbiolo1-buildsrc.html - fowWorkspace: https://bioconductor.org/checkResults/3.21/bioc-LATEST/flowWorkspace/nebbiolo1-buildsrc.html - TRONCO: https://bioconductor.org/checkResults/3.21/bioc-LATEST/TRONCO/nebbiolo1-buildsrc.html How can I try to solve this issue? Best, -- Ramon Diaz-Uriarte Department of Biochemistry, Lab B-31 Facultad de Medicina Universidad Aut?noma de Madrid Arzobispo Morcillo, 4 28029 Madrid Spain Phone: +34-91-497-2412 Email: rdiaz02 at gmail.com r.diaz at uam.es ramon.diaz at iib.uam.es https://ligarto.org/rdiaz