[Bioc-devel] index of Bioc repository unavailable

Hi Laurent,

This is temporary. We're in the process of creating the 3.10 annotation
repo by "forking" the 3.9 annotation repo. As part of this process, we
run a script that generates the PACKAGES index for the new 3.10
annotation repo. The process will take a few more hours before it
completes. Then this warning should go away.

Sorry for the inconvenience.

Cheers,
H.

On 5/28/19 13:04, Laurent Gatto wrote:
> Travis recently started to fail for Bioc devel (see [0] and [1] for another possibly related report), which seems to related to a warning in BiocManager::available():
>
>> BiocManager::version()
> [1] ?3.10?
>> str(BiocManager::available())
> Warning: unable to access index for repository https://urldefense.proofpoint.com/v2/url?u=https-3A__bioconductor.org_packages_3.10_data_annotation_src_contrib&d=DwIF-g&c=eRAMFD45gAfqt84VtBcfhQ&r=BK7q3XeAvimeWdGbWY_wJYbW0WYiZvSXAJJKaaPhzWA&m=UAmM0hNRENFU1Y4T29z5hJJHFLKXbyWj2W8KtGaqZEE&s=I-j2hOB7kAvw9DSOUy8nHyxKb5KH19tqAAxuwZ5E8HY&e= :
>    cannot open URL 'https://urldefense.proofpoint.com/v2/url?u=https-3A__bioconductor.org_packages_3.10_data_annotation_src_contrib_PACKAGES&d=DwIF-g&c=eRAMFD45gAfqt84VtBcfhQ&r=BK7q3XeAvimeWdGbWY_wJYbW0WYiZvSXAJJKaaPhzWA&m=UAmM0hNRENFU1Y4T29z5hJJHFLKXbyWj2W8KtGaqZEE&s=E4iryKtRU-QLj7b-IdceimIOQCK_Ch9bdKzN-YgZMwE&e= '
>   chr [1:16400] "a4" "a4Base" "a4Classif" "a4Core" "a4Preproc" "a4Reporting" ...
>
> Is this a temporary or known issue?
>
> Thanks in advance.
>
> Laurent
>
> [0] https://urldefense.proofpoint.com/v2/url?u=https-3A__travis-2Dci.org_lgatto_Features_jobs_538412208&d=DwIF-g&c=eRAMFD45gAfqt84VtBcfhQ&r=BK7q3XeAvimeWdGbWY_wJYbW0WYiZvSXAJJKaaPhzWA&m=UAmM0hNRENFU1Y4T29z5hJJHFLKXbyWj2W8KtGaqZEE&s=GPakdUkHa8x0dEHAyNi_W5Qup4XJjADUPM2Dk_bdmN4&e=
> [1] https://urldefense.proofpoint.com/v2/url?u=https-3A__travis-2Dci.community_t_error-2Dbioconductor-2Dversion-2Dnot-2Dchanged_3491&d=DwIF-g&c=eRAMFD45gAfqt84VtBcfhQ&r=BK7q3XeAvimeWdGbWY_wJYbW0WYiZvSXAJJKaaPhzWA&m=UAmM0hNRENFU1Y4T29z5hJJHFLKXbyWj2W8KtGaqZEE&s=MN6IdiDrYMIta6JGJlEJ19qaks1n9GKa4h6zMsFtwhQ&e=
>
> _______________________________________________
> Bioc-devel at r-project.org mailing list
> https://urldefense.proofpoint.com/v2/url?u=https-3A__stat.ethz.ch_mailman_listinfo_bioc-2Ddevel&d=DwIF-g&c=eRAMFD45gAfqt84VtBcfhQ&r=BK7q3XeAvimeWdGbWY_wJYbW0WYiZvSXAJJKaaPhzWA&m=UAmM0hNRENFU1Y4T29z5hJJHFLKXbyWj2W8KtGaqZEE&s=nYwhpdHm_ENLuhTqIli7MtPUPdf8EKlcLuXvxqiI_sE&e=
>

--
Herv? Pag?s

Program in Computational Biology
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