Message-ID: <09CD075F-6EA4-46F9-831C-7B8D019C7F64@roswellpark.org>
Date: 2019-01-02T15:55:50Z
From: Turaga, Nitesh
Subject: [Bioc-devel] github bridge to bioconductor
In-Reply-To: <CAMgEeFXPEE=yzTXAEFwAgcLidnD_oNGhMbHNVFRGgO8wDEbBgA@mail.gmail.com>
There is no bridge between GitHub and Bioconductor?s private git server.
You have to push separately to the Bioconductor?s git server. Based on your setup, you have to do,
git push upstream master
which, pushes to git at git.bioconductor.org:packages/rgsepd.
Please let me know if you have done this.
Once you have done this, check https://bioconductor.org/developers/gitlog/ to see if you commit is available on that list.
Best,
Nitesh
> On Jan 2, 2019, at 10:49 AM, Karl Stamm <karl.stamm at gmail.com> wrote:
>
> I think there's a disconnect between the github and the bioconductor build
> server. I cannot seem to get any updates to go into the Bioc devel
> packages.
> I have added a few things to v1.15.x and the Bioc website still lists me as
> 1.15.0.
> I have the workstation set up as such
>
> git remote -v
>
> origin git at github.com:kstammits/rgsepd.git (fetch)
>
> origin git at github.com:kstammits/rgsepd.git (push)
>
> upstream git at git.bioconductor.org:packages/rgsepd (fetch)
>
> upstream git at git.bioconductor.org:packages/rgsepd (push)
>
> and it claims 'everything is up to date' when I try to push. Github shows
> my changes, but they arent going into Bioc. How can I get the two
> connected?
>
> Thanks.
>
> [[alternative HTML version deleted]]
>
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