[Bioc-devel] Package update before october 23rd deadline and build errors [duplicated, wrong email address previous]

Wed, Oct 21, 2020 10:04 AM

Hi Lori, thanks for your reply, unfortunately the problem persists, same 
as the previous build it appears to have issues with BiocParallel that 
we don't have both on local machines and github actions server machines. 
What should we do? Thank you

Il 21/10/2020 14:33, Kern, Lori ha scritto:

We are sorry for the inconvenience.? There was an issue generating the 
build report, again.? We hope to have it resolved and have the new 
build report posted later today.? I do see the 0.99.13 updates in our 
git repository so they were pushed up and should be reflected in the 
next posted build report.
Please see if the issues clear up on the next build report otherwise 
we can investigate further if there is an issue with the BiocParallel 
implementation.

Lori Shepherd

Bioconductor Core Team

Roswell Park Comprehensive Cancer Center

Department of Biostatistics & Bioinformatics

Elm & Carlton Streets

Buffalo, New York 14263

------------------------------------------------------------------------
*From:* Bioc-devel <bioc-devel-bounces at r-project.org> on behalf of 
Giulia Pais <giuliapais1 at gmail.com>
*Sent:* Wednesday, October 21, 2020 5:58 AM
*To:* bioc-devel at r-project.org <bioc-devel at r-project.org>
*Subject:* [Bioc-devel] Package update before october 23rd deadline 
and build errors [duplicated, wrong email address previous]
Hello, bioconductor team,

I'm one of the contributors for the package ISAnalytics. We pushed some
changes we would like to be included in the release for bioconductor
3.12 a couple of days ago but the build report still refers to the older
version, did we miss the deadline for updates or is it normal? Moreover,
by taking a look at the build report for the older version we noticed it
had failed on Windows, which is to us very odd, since we develop and
check the package on windows locally and we also have github automated
actions that perform the same checks on other machines and there were no
errors or warnings. From what we can see from the report it seems a
BiocParallel problem, could you give us feedback on this please? The
link to the build report:
http://secure-web.cisco.com/1zHzlluYonVKy4ELoeCYul0uSR_LsrM-vATHafqCNWVC9GInGrIBBBUFD5evQqHGxEq3urvQtUqxFyRWZKHpwbQ8NV_UQoFsgnSGWJn6jay5_Vh89KT0OA7y8PNREUH-tSKNv34NZMyW6TGTUyOX0hHdYvwKx014kLa5Jtq9tcBtUzNwL_kaT94QNsgn2OdTriktDiI_jMdN_FKV4qtbdP1yTM_FG6NtIox4l8sLKzC5oB3cgvTG9dXqbQ-6K1iVRaz2ml_Prw6T0M-3Ye_A6Lck77kjUxwBKVXSc31mH3vpOiR4-PJBKlk8oXUn3Z15v/http%3A%2F%2Fbioconductor.org%2FcheckResults%2Fdevel%2Fbioc-LATEST%2FISAnalytics%2F

Thank you in advance,

Giulia Pais

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[Bioc-devel] Package update before october 23rd deadline and build errors [duplicated, wrong email address previous]

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