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[Bioc-devel] update bioconductor package

3 messages · Minoo Ashtiani, Turaga, Nitesh

#
Dear Nitesh,

Thanks for your help. I used
http://bioconductor.org/developers/how-to/git/maintain-bioc-only/ to
maintain my package. However, when I write this line

 $ git clone git at git.bioconductor.org:packages/IMMAN
Cloning into 'IMMAN'...
git at git.bioconductor.org: Permission denied (publickey).
fatal: Could not read from remote repository.

Please make sure you have the correct access rights
and the repository exists.

I got this error and I don't know how to fix it.

PS: I am using another GitHub profile for maintenance. The first one was
"jafarilab" that I published the package with that and now I am using
"Minoo-Ashtiani" for updating. However, I have added the package SSH key to
the "Minoo-AShtiani" profile.
Would please help get through this? I have no idea how to fix.

All the best,
Minoo



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02/08/19,
12:29:23 PM

On Sun, Jan 27, 2019 at 7:07 PM Turaga, Nitesh <
Nitesh.Turaga at roswellpark.org> wrote:

            

  
  
#
Dear Nitesh,

Thanks for your help. I used
http://bioconductor.org/developers/how-to/git/maintain-bioc-only/ to
maintain my package. However, when I write this line

 $ git clone git at git.bioconductor.org:packages/IMMAN
Cloning into 'IMMAN'...
git at git.bioconductor.org: Permission denied (publickey).
fatal: Could not read from remote repository.

Please make sure you have the correct access rights
and the repository exists.

I got this error and I don't know how to fix it.

PS: I am using another GitHub profile for maintenance. The first one was
"jafarilab" that I published the package with that and now I am using
"Minoo-Ashtiani" for updating. However, I have added the package SSH key to
the "Minoo-AShtiani" profile.
Would please help get through this? I have no idea how to fix.

All the best,
Minoo



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02/08/19,
12:29:23 PM

On Sun, Jan 27, 2019 at 7:07 PM Turaga, Nitesh <
Nitesh.Turaga at roswellpark.org> wrote:

            

  
  
#
Hi Minoo,

There is access to just one username with the IMMAN package ?jafarilab?. You cannot gain access through ?Minoo-Ashtiani? as it checks for the SSH key and knows there is one user already registered with that key.

I would suggest everyone in the lab, submit changes to https://github.com/jafarilab/IMMAN. And then, sync the GitHub repo with git.bioconductor.org:packages/IMMAN using the ?jafarilab? account. This way, there credential management is handled entirely from your end.

Otherwise, I?d have to give you access rights and you?d have to set up new SSH keys again. 

Best,

Nitesh
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