Hej! I get this error on the build page for easyRNASeq on malbec1: Error: processing vignette 'simpleRNASeq.Rmd' failed with diagnostics: Timeout was reached: Operation timed out after 0 milliseconds with 0 out of 0 bytes received Any idea what is causing this? Thanks, Nico --------------------------------------------------------------- Nicolas Delhomme, PhD UPSC bioinformatics facility Manager Ume? Plant Science Center, Swedish University for Agricultural Sciences (SLU) and Ume? University Tel: +46 90 786 5478 Email: nicolas.delhomme at umu.se SLU - Ume? universitet Ume? S-901 87 Sweden www.slu.se/framtidiskogen ---------------------------------------------------------------
[Bioc-devel] Build time-out on malbec1
3 messages · Nicolas Delhomme, Shepherd, Lori
3 days later
It looks like this was resolved - The ERRORs on the report are now with coding and not Timeouts. Lori Shepherd Bioconductor Core Team Roswell Park Cancer Institute Department of Biostatistics & Bioinformatics Elm & Carlton Streets Buffalo, New York 14263
From: Bioc-devel <bioc-devel-bounces at r-project.org> on behalf of Nicolas Delhomme <nicolas.delhomme at umu.se>
Sent: Monday, May 14, 2018 3:57:30 AM
To: bioc-devel at r-project.org
Subject: [Bioc-devel] Build time-out on malbec1
Sent: Monday, May 14, 2018 3:57:30 AM
To: bioc-devel at r-project.org
Subject: [Bioc-devel] Build time-out on malbec1
Hej! I get this error on the build page for easyRNASeq on malbec1: Error: processing vignette 'simpleRNASeq.Rmd' failed with diagnostics: Timeout was reached: Operation timed out after 0 milliseconds with 0 out of 0 bytes received Any idea what is causing this? Thanks, Nico --------------------------------------------------------------- Nicolas Delhomme, PhD UPSC bioinformatics facility Manager Ume? Plant Science Center, Swedish University for Agricultural Sciences (SLU) and Ume? University Tel: +46 90 786 5478 Email: nicolas.delhomme at umu.se SLU - Ume? universitet Ume? S-901 87 Sweden www.slu.se/framtidiskogen<http://www.slu.se/framtidiskogen> --------------------------------------------------------------- _______________________________________________ Bioc-devel at r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel This email message may contain legally privileged and/or confidential information. If you are not the intended recipient(s), or the employee or agent responsible for the delivery of this message to the intended recipient(s), you are hereby notified that any disclosure, copying, distribution, or use of this email message is prohibited. If you have received this message in error, please notify the sender immediately by e-mail and delete this email message from your computer. Thank you.
Hej Lori! Indeed. Thanks for answering though. Now, it seems to be an error propagating through from biomaRt, so I'll wait for that to be fixed. Best, Nico --------------------------------------------------------------- Nicolas Delhomme, PhD UPSC bioinformatics facility Manager Ume? Plant Science Center, Swedish University for Agricultural Sciences (SLU) and Ume? University Tel: +46 90 786 5478 Email: nicolas.delhomme at umu.se SLU - Ume? universitet Ume? S-901 87 Sweden www.slu.se/framtidiskogen ---------------------------------------------------------------
On 17 May 2018, at 13:51, Shepherd, Lori <Lori.Shepherd at RoswellPark.org> wrote: It looks like this was resolved - The ERRORs on the report are now with coding and not Timeouts. Lori Shepherd Bioconductor Core Team Roswell Park Cancer Institute Department of Biostatistics & Bioinformatics Elm & Carlton Streets Buffalo, New York 14263 From: Bioc-devel <bioc-devel-bounces at r-project.org> on behalf of Nicolas Delhomme <nicolas.delhomme at umu.se> Sent: Monday, May 14, 2018 3:57:30 AM To: bioc-devel at r-project.org Subject: [Bioc-devel] Build time-out on malbec1 Hej! I get this error on the build page for easyRNASeq on malbec1: Error: processing vignette 'simpleRNASeq.Rmd' failed with diagnostics: Timeout was reached: Operation timed out after 0 milliseconds with 0 out of 0 bytes received Any idea what is causing this? Thanks, Nico --------------------------------------------------------------- Nicolas Delhomme, PhD UPSC bioinformatics facility Manager Ume? Plant Science Center, Swedish University for Agricultural Sciences (SLU) and Ume? University Tel: +46 90 786 5478 Email: nicolas.delhomme at umu.se SLU - Ume? universitet Ume? S-901 87 Sweden www.slu.se/framtidiskogen ---------------------------------------------------------------
_______________________________________________ Bioc-devel at r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel This email message may contain legally privileged and/or confidential information. If you are not the intended recipient(s), or the employee or agent responsible for the delivery of this message to the intended recipient(s), you are hereby notified that any disclosure, copying, distribution, or use of this email message is prohibited. If you have received this message in error, please notify the sender immediately by e-mail and delete this email message from your computer. Thank you.