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R-devel August 2005

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Wednesday, August 31, 2005 32 emails
Duncan Murdoch RFC: "loop connections" Luke Tierney 64 bit R for Windows Duncan Murdoch 64 bit R for Windows David Hinds RFC: "loop connections" Jennifer Lai Build Portland Group Compiler Milton Lopez 64 bit R for Windows Jennifer Lai Build Portland Group Compiler Jennifer Lai Build Portland Group Compiler Peter Dalgaard Build Portland Group Compiler Jennifer Lai Build Portland Group Compiler Peter Dalgaard update.packages forces Tcl/Tk interface despite ask=TRUE if the DISPLAY environment variable is set (PR#8115) Robert King update.packages forces Tcl/Tk interface despite ask=TRUE if the DISPLAY environment variable is set (PR#8115) Robert King R --gui doesn't work, but R --help says it does Warnes, Gregory R R CMD check example problem (PR#8113) Warnes, Gregory R Email failure for forwards from r-bugs@cran.r-project.org to r-de vel Duncan Murdoch Bug in copying of S4 objects (PR#8112) Huntsinger, Reid .Call and Segmentation Fault Brian Ripley So-called 'bug' reports PR#8102 and PR#8103 mailerndr@trademe.co.nz Old times (PR#8111) Brian Ripley So-called 'bug' reports PR#8102 and PR#8103 Jari Oksanen Why should package.skeleton() fail R CMD check? Brian Ripley robustness of install.packages/update.packages Martin Maechler Why should package.skeleton() fail R CMD check? Martin Maechler Why should package.skeleton() fail R CMD check? Jari Oksanen Why should package.skeleton() fail R CMD check? Byron Ellis segfault Göran Broström generic function argument list problem Jari Oksanen generic function argument list problem Martin Maechler generic function argument list problem Mark Bravington pos option to function 'library' Martin Maechler generic function argument list problem robin hankin generic function argument list problem
Tuesday, August 30, 2005 14 emails
Brian Ripley pf hangs with infinite arguments (PR#8110) Rob Hyndman pf hangs with infinite arguments (PR#8110) Duncan Murdoch 64 bit R for Windows Thomas Lumley .Call and Segmentation Fault Milton Lopez 64 bit R for Windows Peter Dalgaard .Call and Segmentation Fault Ricardo Luiz Andrade Abrantes .Call and Segmentation Fault Ricardo Luiz Andrade Abrantes .Call and Segmentation Fault stefano iacus segfault David Hinds RFC: "loop connections" Ricardo Luiz Andrade Abrantes .Call and Segmentation Fault Brian Ripley compile R with Portland Group compiler Jennifer Lai compile R with Portland Group compiler Bo Peng efficiency of sample() with prob.
Monday, August 29, 2005 44 emails
Brian Ripley wchar and wstring. (followup question) Brian Ripley "finite" vs "R_FINITE" in colors.c (PR#8108) James Bullard wchar and wstring. (followup question) Bo Peng efficiency of sample() with prob. rbug05@kreil.org "finite" vs "R_FINITE" in colors.c (PR#8108) Roger D. Peng test for readline installation fails if installation location (PR#8107) rbug05@kreil.org Core dump during lazy loading of "survival" at installation time (PR#8106) boku@kreil.org test for readline installation fails if installation (PR#8105) David Kreil test for readline installation fails if installation location non-standard (PR#8104) Peter Dalgaard test for readline installation fails if installation location non-standard (PR#8104) rbug05@kreil.org test for readline installation fails if installation location non-standard (PR#8104) Brian Ripley Question about SET_LENGTH Brian Ripley efficiency of sample() with prob. David Hinds floating point control on windows James Bullard Question about SET_LENGTH McGehee, Robert Problems setting and adding POSIX dates (PR#8103) Chris Paulse floating point control on windows Brian Ripley floating point control on windows Deepayan Sarkar segfault Joel Arrais Rserve seem to be working but it doesn't Chris Paulse floating point control on windows Göran Broström BLAS and ATLAS Thomas Lumley Compile warning in unique.c Brian Ripley Compile warning in unique.c Harris, Michael (NIH/NCI) [E] Compile warning in unique.c Friedrich Leisch Additional Books on R for Web Site Listing Simon Urbanek RServe initialization problem Brian Ripley BLAS and ATLAS Simon Urbanek RServe initialization problem Göran Broström BLAS and ATLAS Berwin A Turlach robustness of install.packages/update.packages (was Re: bug in L-BFGS-B? (PR#8099)) Brian Ripley RServe initialization problem Brian Ripley xerbla called from BLAS routine (PR#8100) Berwin A Turlach robustness of install.packages/update.packages (was Re: bug in L-BFGS-B? (PR#8099)) Göran Broström xerbla called from BLAS routine (PR#8100) joelarrais RServe initialization problem joelarrais RServe initialization problem Brian Ripley robustness of install.packages/update.packages (was Re: bug in L-BFGS-B? (PR#8099)) Brian Ripley xerbla called from BLAS routine (PR#8100) Göran Broström xerbla called from BLAS routine (PR#8100) Brian Ripley segfault stefano iacus segfault Brian Ripley xerbla called from BLAS routine (PR#8100) Brian Ripley xerbla called from BLAS routine (PR#8100)
Sunday, August 28, 2005 7 emails
Marc Schwartz Additional Books on R for Web Site Listing Brian Ripley robustness of install.packages/update.packages (was Re: bug in L-BFGS-B? (PR#8099)) Ricardo Luiz Andrade Abrantes .Call and Segmentation Fault Peter Dalgaard Coding standards (was Re: bug in L-BFGS-B? (PR#8099)) Göran Broström xerbla called from BLAS routine (PR#8100) Berwin A Turlach Coding standards (was Re: bug in L-BFGS-B? (PR#8099)) Berwin A Turlach robustness of install.packages/update.packages (was Re: bug in L-BFGS-B? (PR#8099))
Saturday, August 27, 2005 22 emails
Brian Ripley .Call and Segmentation Fault Ricardo Luiz Andrade Abrantes .Call and Segmentation Fault Gabor Grothendieck RFC: "loop connections" David Hinds RFC: "loop connections" Brian Ripley bug in L-BFGS-B? (PR#8099) Peter Dalgaard bug in L-BFGS-B? (PR#8099) Brian Ripley bug in L-BFGS-B? (PR#8099) Brian Ripley Writing R-extensions Berwin A Turlach bug in L-BFGS-B? (PR#8099) Brian Ripley Writing R-extensions Berwin A Turlach Writing R-extensions Brian Ripley wchar and wstring. Henrik Bengtsson Memory leakage/violation? Henrik Bengtsson Memory leakage/violation? Martin Maechler RFC: "loop connections" David Hinds RFC: "loop connections" Henrik Bengtsson Memory leakage/violation? Brian Ripley Memory leakage/violation? Uwe Ligges Memory leakage/violation? Brian Ripley Free-form to fixed-form Fortran Ales Ziberna Free-form to fixed-form Fortran Brian Ripley RFC: "loop connections"
Friday, August 26, 2005 19 emails
David Hinds RFC: "loop connections" James Bullard wchar and wstring. Byron Ellis .Call and Segmentation Fault Ricardo Luiz Andrade Abrantes .Call and Segmentation Fault Ricardo Luiz Andrade Abrantes .Call and Segmentation Fault Gabor Grothendieck RFC: "loop connections" David Hinds RFC: "loop connections" blue123silver@netscape.net Relatives (PR#8098) Thomas Lumley Memory leakage/violation? Simon Urbanek Free-form to fixed-form Fortran Don MacQueen Free-form to fixed-form Fortran Henrik Bengtsson Memory leakage/violation? Brian Ripley Functions with the same name: best practices Hadley Wickham Functions with the same name: best practices Ales Ziberna Free-form to fixed-form Fortran Brian Ripley Fortran (Was: Re: [R] linux compile options (64-bit)) Göran Broström Fortran (Was: Re: [R] linux compile options (64-bit)) Martin Maechler histogram method for S4 class. Ernesto Jardim histogram method for S4 class.
Thursday, August 25, 2005 6 emails
Erich Neuwirth weigths in boxplot Deepayan Sarkar histogram method for S4 class. Uwe Ligges doesn't recognise ~ (PR#8096) Duncan Murdoch doesn't recognise ~ (PR#8096) lvr@curame.com doesn't recognise ~ (PR#8096) roger bos Typo(s) in proc.time.Rd and comment about ?proc.time (PR#8092)
Wednesday, August 24, 2005 16 emails
Brian Ripley compile R with Portland Group compiler Brian Ripley Implementing a single-precision class with raw (now integer) Peter Ehlers Typo(s) in proc.time.Rd and comment about ?proc.time (PR#8092) Colin A. Smith Implementing a single-precision class with raw (now integer) John C Nash Model forecasts with new factor levels - predict.warn John Fox TCITex and R Simon Urbanek extra parentheses cause death of kernel (PR#8094) rowe@psych.ucsb.edu extra parentheses cause death of kernel (PR#8094) Gabor Grothendieck Typo(s) in proc.time.Rd and comment about ?proc.time (PR#8092) David Hinds Typo(s) in proc.time.Rd and comment about ?proc.time (PR#8092) dkoschuetzki@gmx.de kendall tau correlation test for ties: Potential error (PR#8076) zonalconsultant@netscape.net Relatives (PR#8093) Patrick Burns Typo(s) in proc.time.Rd and comment about ?proc.time (PR#8091) Brian Ripley Typo(s) in proc.time.Rd and comment about ?proc.time (PR#8092) Jennifer Lai compile R with Portland Group compiler Stephen D. Weigand Typo(s) in proc.time.Rd and comment about ?proc.time (PR#8091)
Tuesday, August 23, 2005 15 emails
exclude-me@client-2bsmsend.com Auto coverage too high r-bugs? Take a look (PR#8090) Brian Ripley compile R with Portland Group compiler exclude-me@client-2bsmsend.com Extended-Warranty for your vehicle r-bugs (PR#8088) Jennifer Lai compile R with Portland Group compiler Brian Ripley (PR#8087) NAs by integer overflow in Spearman's test p-value Jan T. Kim NAs by integer overflow in Spearman's test p-value (PR#8087) Martin Maechler weigths in boxplot Gabor Grothendieck Which TEX for Wiindows Brian Ripley Which TEX for Wiindows Gabor Grothendieck do.call(): no need for quote {was .. Questions about calls..} Ales Ziberna Which TEX for Wiindows Duncan Murdoch TCITex and R Duncan Murdoch Functions with the same name: best practices Martin Maechler do.call(): no need for quote {was .. Questions about calls..} Henrik Bengtsson Fetching Warning Messages
Monday, August 22, 2005 29 emails
Brian Ripley Functions with the same name: best practices Nikhil Shah Fetching Warning Messages Mark Bravington TCITex and R Gabor Grothendieck Functions with the same name: best practices Hadley Wickham Functions with the same name: best practices Duncan Murdoch Questions about calls and formulas Charles Geyer bizarre signif stars in Sweave latex Erich Neuwirth Questions about calls and formulas David Hinds RFC: "loop connections" Gabor Grothendieck Questions about calls and formulas Erich Neuwirth Questions about calls and formulas Douglas Bates Questions about calls and formulas Erich Neuwirth Questions about calls and formulas Erich Neuwirth boxplot.formula and questions about calls and formulas Marc Schwartz (via MN) An lgrind definition for the S language Douglas Bates An lgrind definition for the S language Brian Ripley Package tests: best practices Hadley Wickham Package tests: best practices Brian Ripley Fetching Warning Messages Nikhil Shah Fetching Warning Messages kwang-youn-kim@uiowa.edu Copy and paste with X11 (PR#8085) John Fox Internationalization questions Brian Ripley is.numeric (PR#8067) Brian Ripley Internationalization questions John Fox Internationalization questions Brian Ripley Implementing a single-precision class with raw SecuriQ@hondabr.com.br [Virus Check] Brian Ripley Example in pdf() help file (PR#8083) Erik.Jorgensen@agrsci.dk Example in pdf() help file (PR#8083)
Sunday, August 21, 2005 12 emails
Brian Ripley Internationalization questions Brian Ripley bizarre signif stars in Sweave latex John Fox Internationalization questions Charles Geyer bizarre signif stars in Sweave latex Nigel Sim IPC Petr Savicky segmentation fault in R-patched-2005-08-21 (PR#8081) Erich Neuwirth weigths in boxplot Sean O'Riordain IPC Duncan Temple Lang IPC Duncan Temple Lang IPC Sean O'Riordain IPC Nigel Sim IPC
Saturday, August 20, 2005 7 emails
Duncan Murdoch missing sh.exe file when running "R CMD INSTALL test" (PR#8068) Seth Falcon Questions on "\" vs "/" on Windows Brian Ripley Questions on "\" vs "/" on Windows Gabor Grothendieck Questions on "\" vs "/" on Windows Dirk Eddelbuettel Different gcc versions Seth Falcon Questions on "\" vs "/" on Windows Göran Broström Different gcc versions
Friday, August 19, 2005 6 emails
Colin A. Smith Implementing a single-precision class with raw Philippe GROSJEAN SciViews-R v8.7 and Rcmdr v1.0-2 (PR#8079) Patrick Burns minor typo in Writing R Extensions haydin@karaelmas.edu.tr SciViews-R v8.7 and Rcmdr v1.0-2 (PR#8079) Brian Ripley PS driver crashes when no permissions (PR#8078) jussi.jousimo@ktl.fi PS driver crashes when no permissions (PR#8078)
Thursday, August 18, 2005 5 emails
John Chambers Registering S3 class from external package Gavin Simpson problem using model.frame() Peter Dalgaard kendall tau correlation test for ties: Potential error (PR#8076) dkoschuetzki@gmx.de kendall tau correlation test for ties: Potential error (PR#8076) Gavin Simpson problem using model.frame()
Wednesday, August 17, 2005 8 emails
Gavin Simpson problem using model.frame() Jari Oksanen problem using model.frame() Gabor Grothendieck problem using model.frame() Gavin Simpson problem using model.frame() Martin Maechler problem using model.frame() Cyrus Harmon PATCH to Makefile.in w/ Makeconf LIBR variable update to allow builds within R to find Framework Brian Ripley About R variable references Duncan Temple Lang About R variable references
Tuesday, August 16, 2005 22 emails
Markku Mielityinen About R variable references Thomas Lumley bug? (PR#8074) Berwin A Turlach bug? (PR#8074) Paul Mosquin bug? (PR#8074) ralph covington marcia ignacio gerundo adelaide Thomas Lumley bug? (PR#8074) Cyrus Harmon MacOS specific framework install problem pmosquin@hotmail.com bug? (PR#8074) apjaworski@mmm.com small typo in "An Introduction to R" Peter Dalgaard quirky behavior from rbinom (PR#8071) Brian Ripley quirky behavior from rbinom (PR#8071) Arni Magnusson pch=NA in bxp.Rd (PR#8073) Arni Magnusson yaxs in bxp() (PR#8072) cpaulse@aecom.yu.edu quirky behavior from rbinom (PR#8071) Gavin Simpson problem using model.frame() Gabor Grothendieck problem using model.frame() Gavin Simpson problem using model.frame() Gabor Grothendieck problem using model.frame() Gavin Simpson problem using model.frame() jcperry@jcperry.com doc - matrix multiplication (PR#8069) u9126801@stat.nctu.edu.tw missing sh.exe file when running "R CMD INSTALL test" (PR#8068)
Monday, August 15, 2005 9 emails
Joern Toedling is.numeric (PR#8067) Brian Ripley Patches (was Re: documentation for eval() typo) Paul Roebuck Patches (was Re: documentation for eval() typo) Duncan Murdoch Shutdown by to much data (PR#8065) Brian Ripley png and resolution (PR#8066) kkrueger@einthal.de png and resolution (PR#8066) Brian Ripley Shutdown by to much data (PR#8065) gemachtenest@gmx.de Shutdown by to much data (PR#8065) Henrik Bengtsson parse():ing a unclosed string
Sunday, August 14, 2005 6 emails
Brian Ripley parse():ing a unclosed string Brian Ripley documentation for eval() typo Brian Ripley make check-all fails (PR#8063) Paul Roebuck documentation for eval() typo jed@jkaplan.info make check-all fails (PR#8063) Henrik Bengtsson parse():ing a unclosed string
Saturday, August 13, 2005 2 emails
Paul Roebuck Handling warning messages Henrik Bengtsson Handling warning messages
Friday, August 12, 2005 2 emails
Paul Roebuck Handling warning messages Nikhil Shah Handling warning messages
Thursday, August 11, 2005 3 emails
Douglas Bates include C functions from nmath in my own C functions yyan liu include C functions from nmath in my own C functions Paul Roebuck Registering S3 class from external package
Wednesday, August 10, 2005 2 emails
Brian Ripley Reading a repeated fixed format Douglas Bates Reading a repeated fixed format
Tuesday, August 9, 2005 3 emails
info@jobsearch-monster.com Job Offer (PR#8059) mikael@amazon.com qpois minor bug (PR#8058) Brian Ripley gfortran and BLAS on AMD64 Linux
Monday, August 8, 2005 1 email
apipatta@colorado.edu bug found in predict.locfit in locfit package (PR#8057)
Sunday, August 7, 2005 2 emails
Duncan Murdoch Invalid Page fault in R.dll in mouse click (PR#8055) ddutta9@sify.com Invalid Page fault in R.dll in mouse click (PR#8055)
Saturday, August 6, 2005 1 email
Brian Ripley Tests of gcc-4.0.1
Friday, August 5, 2005 20 emails
Sebastien Durand call fortran in R Kjetil Halvorsen Tests of gcc-4.0.1 stefano iacus call fortran in R Brian Ripley Tests of gcc-4.0.1 Sebastien Durand call fortran in R John Chambers S4 generating function John Chambers S4 setClass with prototypes " issues" (PR#8053) Bert Gunter S4 setClass with prototypes " issues" (PR#8053) Paul Roebuck S4 generating function Brian Ripley unable to start pdf, postscript devices (PR#8052) jmf@atmosinfo.com unable to start pdf, postscript devices (PR#8052) Brian Ripley object.size() bug? John Chambers S4 generating function Duncan Murdoch object.size() bug? Roger D. Peng object.size() bug? Martin Maechler object.size() bug? Martin Maechler R CMD check failing to warn when it should Paul Roebuck S4 generating function Bill Northcott call fortran in R Brian Ripley (PR#8049) add1.lm and add1.glm not handling weights and
Thursday, August 4, 2005 18 emails
stefano iacus call fortran in R Stephen D. Weigand Documentation bug in libPaths.Rd (PR#8050) Charles Geyer valgrind complains about regex.c (PR#8043) Simon Urbanek call fortran in R Sebastien Durand call fortran in R Sebastien Durand call fortran in R David Firth add1.lm and add1.glm not handling weights and offsets properly (PR#8049) Sebastien Durand call fortran in R Brian Ripley call fortran in R Sebastien Durand call fortran in R Jeffrey Horner call fortran in R Sebastien Durand call fortran in R Brian Ripley call fortran in R Duncan Murdoch call fortran in R Sebastien Durand call fortran in R Duncan Murdoch call fortran in R Sebastien Durand call fortran in R Ales Ziberna call fortran in R
Wednesday, August 3, 2005 14 emails
Paul Roebuck object.size() bug? Sebastien Durand call fortran in R Paul Roebuck call fortran in R Sebastien Durand call fortran in R Peter Dalgaard valgrind complains about regex.c (PR#8043) Charles Geyer valgrind complains about regex.c (PR#8043) Charles Geyer valgrind complains about regex.c (PR#8043) Deepayan Sarkar R CMD check failing to warn when it should Procedure Xhazzensgg Gavin Simpson deparse(substitute(x)) and S3 methods Gavin Simpson deparse(substitute(x)) and S3 methods A.J. Rossini tree/graph data structure APIs? Uwe Ligges tree/graph data structure APIs? Andrew Piskorski tree/graph data structure APIs?
Tuesday, August 2, 2005 8 emails
Robert Dodier possibility of R/Maxima linking Peter Dalgaard Follow-Up: R on FC4 Charles Geyer valgrind complains about regex.c (PR#8043) Charles Geyer valgrind complains about regex.c (PR#8043) Charles Geyer valgrind complains about regex.c (PR#8043) Brian Ripley valgrind complains about regex.c (PR#8043) Duncan Murdoch valgrind complains about regex.c (PR#8043) Duncan Murdoch valgrind complains about regex.c (PR#8043)
Monday, August 1, 2005 14 emails
Brian Ripley valgrind complains about regex.c (PR#8043) Charles Geyer valgrind complains about regex.c (PR#8043) Gabor Grothendieck fifo on Windows Peter Dalgaard Follow-Up: R on FC4 Duncan Murdoch fifo on Windows Gavin Simpson Follow-Up: R on FC4 Thomas Lumley Follow-Up: R on FC4 Gabor Grothendieck fifo on Windows Gavin Simpson Follow-Up: R on FC4 Simon Urbanek Testing for English locale John Fox Testing for English locale Duncan Murdoch Most accurate timing? Martin Maechler Most accurate timing? Duncan Murdoch Most accurate timing?