R-devel - November 2005 - Date View

Wednesday, November 30, 2005 16 emails

Deepayan Sarkar bash completion for R Gavin Simpson \dQuote{} in \code{} not processed Gavin Simpson Building a windows binary of a package on Linux Marc Schwartz (via MN) Building a windows binary of a package on Linux Brian Ripley Building a windows binary of a package on Linux Duncan Murdoch Building a windows binary of a package on Linux Gavin Simpson Building a windows binary of a package on Linux Duncan Murdoch RNG stuck via Fortran call Duncan Murdoch Building a windows binary of a package on Linux Gilles GUILLOT RNG stuck via Fortran call Gavin Simpson Building a windows binary of a package on Linux Peter Dalgaard multinom crashes (when I do something stupid) (PR#8358) rob foxall (IFR) multinom crashes (when I do something stupid) (PR#8358) Gilles GUILLOT R binomial RNG stuck at 1 via Fortran call Gilles GUILLOT R binomial RNG stuck at 1 via Fortran call Gilles GUILLOT R binomial RNG stuck at 1 via Fortran call

Tuesday, November 29, 2005 4 emails

robin hankin x[1,], x[1,,], x[1,,,], ... Gabor Grothendieck x[1,], x[1,,], x[1,,,], ... robin hankin x[1,], x[1,,], x[1,,,], ... Martin Maechler (PR#8337) formatC adds leading space -- on some Windoze

Monday, November 28, 2005 9 emails

Brian Ripley Proposed Patch for table.Rd Kjetil Halvorsen buglet in ?StructTS Marc Schwartz (via MN) Proposed Patch for table.Rd Brian Ripley terms.object documentation bug? (PR#8353) Brian Ripley No Rmath.h when making just standalone library Jussi Piitulainen No Rmath.h when making just standalone library Simon Wood terms.object documentation bug? (PR#8353) Matthias Kohl import of Namespaces Martin Maechler as.data.frame() : needs "..." ?!

Sunday, November 27, 2005 3 emails

Brian Ripley segfault on write.dcf with gzfile connection Seth Falcon segfault on write.dcf with gzfile connection Brian Ripley segfault on write.dcf with gzfile connection

Saturday, November 26, 2005 5 emails

Seth Falcon segfault on write.dcf with gzfile connection Martin Maechler Help page of "par" Berwin A Turlach Help page of "par" John Fox When, where, and how to report bugs [was Rcmdr for Tiger Mac OS not running (PR#8350)] glsmah001@mail.uct.ac.za Rcmdr for Tiger Mac OS not running (PR#8350)

Friday, November 25, 2005 8 emails

Henrik Bengtsson list.files(recursive=T) does not return directory names Bill Dunlap list.files(recursive=T) does not return directory names Peter Ehlers "integrate" error using a constant function (PR#8348) joelpf@u.washington.edu "integrate" error using a constant function (PR#8348) Deepayan Sarkar 'partial' in sort() inefficient? Vasundhara Akkineni read.table without sep Brian Ripley Buliding a package (on Windows) does not produce libs directory Ales Ziberna Buliding a package (on Windows) does not produce libs directory

Thursday, November 24, 2005 15 emails

Martin Morgan Windows R CMD build <pkg> leftovers Brian Ripley write.csv ignores 'row.names' Peter Dalgaard write.csv ignores 'row.names' Roger D. Peng write.csv ignores 'row.names' Roger D. Peng write.csv ignores 'row.names' Brian Ripley write.csv Roger D. Peng write.csv Florence Combes write.csv Gavin Simpson write.csv Sven Schaltenbrand write.csv Duncan Murdoch Changes to Windows registry in R-2.2.0 Len Thomas Changes to Windows registry in R-2.2.0 Brian Ripley winMenuAdd Peter Dalgaard Infinite recursion in S3 methods crashes R on windows (related to PR#8203?) Kurt Hornik Makefiles and other customization

Wednesday, November 23, 2005 24 emails

Brian Ripley qbinom returns NaN Brian Ripley Infinite recursion in S3 methods crashes R on windows (related to PR#8203?) Tony Plate x[1,], x[1,,], x[1,,,], ... Henrik Bengtsson x[1,], x[1,,], x[1,,,], ... Henrik Bengtsson Infinite recursion in S3 methods crashes R on windows (related to PR#8203?) Ross Boylan Makefiles and other customization Kasper Daniel Hansen Makefiles and other customization Ross Boylan Makefiles and other customization Spencer Graves qbinom returns NaN Rich FitzJohn Infinite recursion in S3 methods crashes R on windows (related to PR#8203?) Kurt Hornik problem with \eqn (PR#8322) Kurt Hornik Add fpicflags for Intel(R) Fortran Compiler (PR#8344) Brian Ripley Add fpicflags for Intel(R) Fortran Compiler (PR#8344) Seth Falcon winMenuAdd Brian Ripley Add fpicflags for Intel(R) Fortran Compiler (PR#8344) Liaw, Andy x[1,], x[1,,], x[1,,,], ... Peter Dalgaard x[1,], x[1,,], x[1,,,], ... Brian Ripley winMenuAdd Patrick Burns x[1,], x[1,,], x[1,,,], ... Joerg van den Hoff nls and weigthing the fit Henrik Bengtsson x[1,], x[1,,], x[1,,,], ... Hin-Tak Leung problem with \eqn (PR#8322) Uwe Ligges winMenuAdd Brian Ripley make check fails for R 2.3.0 (PR#8343)

Tuesday, November 22, 2005 20 emails

Seth Falcon ANN: R for Bioinformatics (advanced R programming) Course Martin Morgan winMenuAdd Chris Sims Inaccurate documentation for qr.R and qr.Q (PR#8347) Sébastien Bihorel failure in `setClass' examples John Chambers failure in `setClass' examples Sébastien Bihorel failure in `setClass' examples Ross Boylan problem with \eqn (PR#8322) kugelfang@gentoo.org Add fpicflags for Intel(R) Fortran Compiler (PR#8344) Arne Henningsen make check fails for R 2.3.0 (PR#8343) Martin Maechler make check fails for R 2.3.0 (PR#8343) Brian Ripley Add fpicflags for Intel(R) Fortran Compiler (PR#8344) Iago Mosqueira install.packages in R 2.2.0 Liaw, Andy make check fails for R 2.3.0 (PR#8343) Arne Henningsen make check fails for R 2.3.0 (PR#8343) Arne Henningsen make check fails for R 2.3.0 (PR#8343) kugelfang@gentoo.org Add fpicflags for Intel(R) Fortran Compiler (PR#8344) Brian Ripley make check fails for R 2.3.0 (PR#8343) Arne Henningsen make check fails for R 2.3.0 (PR#8343) Brian Ripley NAMESPACE, S4, and .onLoad Brian Ripley (PR#8337) formatC adds leading space -- on some Windoze

Monday, November 21, 2005 10 emails

Martin Maechler (PR#8337) formatC adds leading space -- on some Windoze Christoph Buser using a factor as col argument in plot: Duncan Murdoch windrose (circular package) error in table (PR#8341) Allyson.Williams@dpi.qld.gov.au windrose (circular package) error in table (PR#8341) Paul Roebuck NAMESPACE, S4, and .onLoad Seth Falcon NAMESPACE, S4, and .onLoad Paul Roebuck shared-mime-info (PR#8278) Kevin Wright formatC adds leading space to exponential format (PR#8337) Hin-Tak Leung problem with \eqn (PR#8322) Hin-Tak Leung problem with \eqn (PR#8322)

Sunday, November 20, 2005 3 emails

François Pinard mapply() gives seg fault (PR#8332) Peter Dalgaard mapply() gives seg fault (PR#8332) pinard@iro.umontreal.ca mapply() gives seg fault (PR#8332)

Saturday, November 19, 2005 1 email

Bjørn-Helge Mevik challenge: using 'subset = <computed>' inside function ..

Friday, November 18, 2005 21 emails

Thursday, November 17, 2005 16 emails

Brian Ripley PR#8282 Brian Ripley R-exts.texi in SVN version 36380 Gregor Gorjanc Problem with fitdistr for gamma in R 2.2.0 Berwin A Turlach R-exts.texi in SVN version 36380 pdbailey@uchicago.edu PR#8282 Peter Ehlers Matrix (PR#8321) Cougar Lawrence Matrix (PR#8321) Ross Boylan problem with \eqn (PR#8322) Peter Ehlers Matrix (PR#8321) Peter Ehlers Problem with fitdistr for gamma in R 2.2.0 Cougar@psu.edu Matrix (PR#8321) Duncan Murdoch Scan data from a .txt file Peter Dalgaard Problem with fitdistr for gamma in R 2.2.0 Vasundhara Akkineni Scan data from a .txt file Peter Ehlers Problem with fitdistr for gamma in R 2.2.0 Gorjanc Gregor Problem with fitdistr for gamma in R 2.2.0

Wednesday, November 16, 2005 18 emails

Brian Ripley Principal Components Analysis (PR#8320) sarkar@mail.utexas.edu Principal Components Analysis (PR#8320) Paul Roebuck two-way communication using Unix pipes Evolution Travel Newsletter Evolution Travel Brian Ripley two-way communication using Unix pipes Wolski Problem with R.2.2 "No rule to make target `d:/prog/r/rw2011/include/R.h" Uwe Ligges PPC package-ppc.read.raw.nobatch (PR#8316) Brian Ripley Problem with R.2.2 "No rule to make target `d:/prog/r/rw2011/include/R.h" Barry Rowlingson two-way communication using Unix pipes Wolski Problem with R.2.2 "No rule to make target `d:/prog/r/rw2011/include/R.h" Jonathan Callahan two-way communication using Unix pipes martin.o'gorman@nonlinear.com PPC package-ppc.read.raw.nobatch (PR#8316) Brian Ripley Malformed package name (PR#8314) Martin Maechler Malformed package name (PR#8314) Peter Dalgaard Malformed package name (PR#8314) petrakl@zce.cz Malformed package name (PR#8314) Martin Maechler Package manpage DCF hooks Brian Ripley Bug or a feature that I completely missed?

Tuesday, November 15, 2005 7 emails

Gabor Grothendieck Bug or a feature that I completely missed? Berwin A Turlach Bug or a feature that I completely missed? Paul Roebuck Package manpage DCF hooks Brian Ripley Bug in the example of function optim() (PR#8312) wolfgang.lederer@stat.uni-muenchen.de Bug in the example of function optim() (PR#8312) Martin Maechler Package manpage DCF hooks Martin Maechler Dead link in documentation for dbinom

Monday, November 14, 2005 7 emails

Stephen D. Weigand Typo in isR.Rd (PR#8310) Paul Roebuck Package manpage DCF hooks Ivan Frohne Dead link in documentation for dbinom Stephen D. Weigand typo in as.POSIXlt.Rd (PR#8309) Brian Ripley optimized BLAS Gabor Grothendieck Package manpage DCF hooks Paul Roebuck Package manpage DCF hooks

Sunday, November 13, 2005 4 emails

Simon Urbanek Help finding some code in the R source code Greg Evans Help finding some code in the R source code Simon Urbanek Memory allocation (PR#8304) hans.kestler@gmail.com Memory allocation (PR#8304)

Saturday, November 12, 2005 1 email

Berwin A Turlach Suggested changes to R-lang.texi and R-exts.texi

Friday, November 11, 2005 5 emails

toby.m@mail.utexas.edu configure on solaris 2.9 with non GNU compilers (PR#8300) John Fox Recursive dependencies(Rcmdr) Brian Ripley Recursive dependencies(Rcmdr) Peter Dalgaard Recursive dependencies(Rcmdr) mcallaha@mitre.org Typo in R-Intro, v. 2.2.0, sec. 8.1 (PR#8299)

Thursday, November 10, 2005 9 emails

Zuraniewski fSeries armaFit problem Vincent Goulet Writing new probability functions Latchezar Dimitrov (Case 843) Recon-X msg: "Failed to get the list of instances: Server's ssh public key does not match our private ssh key" nwew Problem with C code under R2.2 only. Duncan Murdoch R: bug in windows GUI/script editor (PR#8288) Duncan Murdoch R: bug in windows GUI/script editor (PR#8288) Duncan Murdoch R: bug in windows GUI/script editor (PR#8288) Peter Dalgaard # symbol in input data (PR#8296) roberto.ugoccioni@sanpaoloimi.com R: bug in windows GUI/script editor (PR#8288)

Wednesday, November 9, 2005 14 emails

scanrikpr@sbcglobal.net # symbol in input data (PR#8296) Duncan Murdoch bug in windows GUI/script editor (PR#8288) Duncan Mackay bug in windows GUI/script editor (PR#8288) Henrik Bengtsson Request: read.table() - argument 'flush' to be passed to scan() Duncan Mackay bug in windows GUI/script editor (PR#8288) Duncan Murdoch Packages that require other packages - How? voilesnews.newsletter@wanadoo.fr News Letter - Voiles News magazine - n?43 - 8 novembre 2005 (PR#8294) Kasper Daniel Hansen Packages that require other packages - How? Roger D. Peng Packages that require other packages - How? Duncan Murdoch Packages that require other packages - How? Gavin Simpson Packages that require other packages - How? Hin-Tak Leung R build under mandriva 10.2 Uwe Ligges bug in windows GUI/script editor (PR#8288) Torsten Hothorn useR! 2006: submission & registration started!

Tuesday, November 8, 2005 12 emails

Tim Hesterberg R CMD Rdconv file.Rd --type=Ssgm \code{x} should use <code> (PR#8290) Tim Hesterberg R CMD Sd2Rd a.sgml > a.Rd does not recognize <code> tag (PR#8289) Andrew Piskorski R thread safe shenanigans Feedback Duncan Murdoch bug in windows GUI/script editor (PR#8288) roberto.ugoccioni@sanpaoloimi.com bug in windows GUI/script editor (PR#8288) Brian Ripley R-2.2.0: malloc probelm in regex code (PR#8287) Gilles GUILLOT R build under mandriva 10.2 gml4410@ggr.co.uk R-2.2.0: malloc probelm in regex code (PR#8287) Ben Bolker dgamma error condition? Achim Zeileis mosaicplot() update and clarification Torsten Hothorn mosaicplot() update and clarification

Monday, November 7, 2005 17 emails

Brian Ripley dgamma error condition? Hadley Wickham Brainstorm: Alpha and Beta testing of R versions John W Emerson mosaicplot() update and clarification Andrew Robinson Brainstorm: Alpha and Beta testing of R versions Duncan Temple Lang R thread safe Martin Maechler Brainstorm: Alpha and Beta testing of R versions John W Emerson mosaicplot() update Achim Zeileis mosaicplot() update Olaf.Schenk@unibas.ch R thread safe Achim Zeileis mosaicplot() update John W Emerson mosaicplot() update Ben Bolker Brainstorm: Alpha and Beta testing of R versions Brian Ripley mosaicplot() update John W Emerson mosaicplot() update Hin-Tak Leung Classification Trees and basic Random Forest pkg using t ree structures in C Paul Roebuck Brainstorm: Alpha and Beta testing of R versions Torsten Hothorn Classification Trees and basic Random Forest pkg using tree structures in C

Saturday, November 5, 2005 6 emails

Henrik Bengtsson Brainstorm: Alpha and Beta testing of R versions Andrew Robinson Brainstorm: Alpha and Beta testing of R versions Seth Falcon clarification of library/require semantics Dirk Eddelbuettel How to make install DESTDIR= R S Ananda Murthy How to make install DESTDIR= Rolf Turner read.fwf; bug reports 8226 & 8236 (PR#8284)

Friday, November 4, 2005 21 emails

R S Ananda Murthy R-2.2.0 Compile problem on Slackware 10.2 David Meyer Alpha and Beta testing of R versions Brian Ripley clarification of library/require semantics Liaw, Andy Classification Trees and basic Random Forest pkg using t ree structures in C Izmirlian, Grant (NIH/NCI) [E] Classification Trees and basic Random Forest pkg using tree structures in C Robert Gentleman clarification of library/require semantics Hin-Tak Leung R-2.2.0 Compile problem on Slackware 10.2 Hin-Tak Leung Classification Trees and basic Random Forest pkg using tree structures in C Brian Ripley R-2.2.0 Compile problem on Slackware 10.2 R S Ananda Murthy R-2.2.0 Compile problem on Slackware 10.2 Peter Dalgaard shared-mime-info (PR#8278) Izmirlian, Grant (NIH/NCI) [E] Classification Trees and basic Random Forest pkg using tree structures in C Brian Ripley Changes to environments in R-devel Ben Bolker dgamma error condition? Peter Dalgaard shared-mime-info (PR#8278) Peter Dalgaard shared-mime-info (PR#8278) Simon Urbanek Alpha and Beta testing of R versions Vaidotas Zemlys shared-mime-info (PR#8278) Peter Dalgaard shared-mime-info (PR#8278) Brian Ripley Alpha and Beta testing of R versions Martin Maechler Alpha and Beta testing of R versions

Thursday, November 3, 2005 17 emails

Berwin A Turlach small bug in gl1ce, package lasso2 (PR#8280) Brian Ripley small bug in gl1ce, package lasso2 (PR#8280) Duncan Murdoch Changes to environments in R-devel Izmirlian, Grant (NIH/NCI) [E] small bug in gl1ce, package lasso2 (PR#8280) Izmirlian, Grant (NIH/NCI) [E] small bug in gl1ce, package lasso2 (PR#8279) Simon Urbanek typo in browse.pkgs Paul Gilbert proposal to make loadings() generic in R-devel Brian Ripley typo in browse.pkgs G. Sawitzki typo in browse.pkgs Brian Ripley typo in browse.pkgs G. Sawitzki typo in browse.pkgs Vaidotas Zemlys shared-mime-info (PR#8278) Vaidotas Zemlys shared-mime-info (PR#8278) Brian Ripley shared-mime-info (PR#8278) Peter Dalgaard shared-mime-info (PR#8278) Brian Ripley shared-mime-info (PR#8278) Vaidotas Zemlys shared-mime-info (PR#8278)

Wednesday, November 2, 2005 3 emails

Duncan Murdoch unvectorized option for outer() Peter Dalgaard configure error under FC 4 64 bit (PR#8276) Rob James configure error under FC 4 64 bit (PR#8276)

Tuesday, November 1, 2005 20 emails

John Maindonald Bugs/issues with model.tables() (PR#8275) Duncan Murdoch Documentation error in online help for print.data.frame (PR#8274) Duncan Murdoch Documentation error in online help for print.data.frame (PR#8273) ch-r@bobobeach.com Documentation error in online help for print.data.frame (PR#8273) Brian Ripley Im() of negative non-complex numbers is pi (PR#8272) Dan Davison Im() of negative non-complex numbers is pi (PR#8272) Dan Davison Im() of negative non-complex numbers is pi (PR#8272) Gabor Grothendieck strsplit ignores empty fields (PR#8271) beissbarth@wehi.edu.au strsplit ignores empty fields (PR#8271) Duncan Murdoch spyware detected (PR#8270) Duncan Murdoch unvectorized option for outer() Liaw, Andy S4 classes in existing packages Jeff Enos S4 classes in existing packages kin.chan@yale.edu spyware detected (PR#8270) Thomas Lumley unvectorized option for outer() Duncan Murdoch unvectorized option for outer() Brian Ripley Yates' correction for continuity in chisq.test (PR#8265) Pfaff, Bernhard Dr. S4 classes in existing packages Brian Ripley S4 classes in existing packages Matthias Kohl S4 classes in existing packages

R-devel November 2005