R-devel - May 2006 - Date View

Wednesday, May 31, 2006 12 emails

Account_aggregation_apollo at gmail.com CT unit to drill on Mars, Revenue Up 200% - Ref. jh010 (PR#8918) Simone Giannerini Inconsistent behaviour when manipulating a ts object with frequency = 12 or 4 Duncan Temple Lang iSPlots paper Gabor Grothendieck Bitmap device available for R CMD check? Kuhn, Max Bitmap device available for R CMD check? Brian Ripley Inconsistent behaviour when manipulating a ts object with frequency = 12 or 4 Thomas Dreibholz Patch: context stack size in gram.y Simone Giannerini Inconsistent behaviour when manipulating a ts object with frequency = 12 or 4 Brian Ripley Patch: context stack size in gram.y Simone Giannerini Inconsistent behaviour when subsetting a ts object with frequency = 12 or 4 Thomas Dreibholz Patch: context stack size in gram.y Philippe GROSJEAN Presentation of R at RMLL 2006

Tuesday, May 30, 2006 19 emails

Monday, May 29, 2006 8 emails

Peter Dalgaard Numerical error in R (win32) (PR#8909) Peter Ehlers Numerical error in R (win32) (PR#8909) Uwe Ligges Numerical error in R (win32) (PR#8909) Duncan Murdoch Numerical error in R (win32) (PR#8909) teck.lim at imperial.ac.uk Numerical error in R (win32) (PR#8909) Thomas Lumley memory profiling Peter Dalgaard misspelling of "Mauchly" (PR#8908) g_lukas at freesurf.ch misspelling of "Mauchly" (PR#8908)

Sunday, May 28, 2006 1 email

Diego Diez R-2.3 macosx segfault

Saturday, May 27, 2006 4 emails

Martin Maechler typo in ?dimnames Renaud Lancelot Recommended package nlme: bug in predict.lme when an independent variable is a polynomial (PR#8905) pinard at iro.umontreal.ca Correction to ?alist (PR#8904) Berwin A Turlach Patch proposal for match.fun()

Friday, May 26, 2006 14 emails

Brian Ripley R 2.3.1 release candidates starting tomorrow Dirk Eddelbuettel R 2.3.1 release candidates starting tomorrow Andrew Robinson R 2.3.1 release candidates starting tomorrow George Ostrouchov compiling tests/Embedding Brian Ripley compiling tests/Embedding Antonio, Fabio Di Narzo compiling tests/Embedding Peter Dalgaard R 2.3.1 release candidates starting tomorrow Peter Dalgaard (PR#8877) predict.lm does not have a weights argument for Brian Ripley memory profiling Tobias Verbeke typo in ?dimnames Duncan Temple Lang compiling tests/Embedding Roger D. Peng memory profiling Uwe Ligges cpu usage stays at 100% (PR#8903) ifetzer at gmx.net cpu usage stays at 100% (PR#8903)

Thursday, May 25, 2006 6 emails

Henrik Bengtsson save() saves extra stuff if object is not evaluated Brian Ripley compiling tests/Embedding George Ostrouchov compiling tests/Embedding Douglas Bates R Project accepted for the Google Summer of Code Luke Tierney save() saves extra stuff if object is not evaluated Henrik Bengtsson save() saves extra stuff if object is not evaluated

Wednesday, May 24, 2006 11 emails

Johannes Ranke (PR#8877) predict.lm does not have a weights argument for newdata Ryan Lovett 2.3 issues on Mac François Pinard Problem with pasteing formulas (PR#8897) Brian Ripley Problem with pasteing formulas (PR#8897) john.little at dunelm.org.uk Problem with pasteing formulas (PR#8897) Brian Ripley optim "CG" bug w/patch proposal (PR#8786) Brian Ripley (PR#8877) predict.lm does not have a weights argument for Friedrich Leisch Wishlist: Vignettes on CRAN Antonietta di Salvatore the computation of exact p-value for the nonparametric cor-test with ties Friedrich Leisch Suggesting changes to HELP files? Peter Dalgaard (PR#8877) predict.lm does not have a weights argument for

Tuesday, May 23, 2006 16 emails

Brian Ripley (PR#8877) predict.lm does not have a weights argument for Kasper Daniel Hansen protect Brian Ripley protect Kasper Daniel Hansen protect Brian Ripley bug in ccf (PR#8893) KjetilBrinchmannHalvorsen at gmail.com bug in ccf (PR#8893) Peter Ruckdeschel confused by inheritance... Ei-ji Nakama Sys.setlocale upsets windows graphics device (PR#8887) Dirk Eddelbuettel Wishlist: Vignettes on CRAN John Chambers confused by inheritance... Brian Ripley Sys.setlocale upsets windows graphics device (PR#8887) Brian Ripley protect Ei-ji Nakama Sys.setlocale upsets windows graphics device (PR#8887) Kurt Hornik Wishlist: Vignettes on CRAN Kurt Hornik Wishlist: Vignettes on CRAN Brian Ripley protect

Monday, May 22, 2006 31 emails

Kasper Daniel Hansen protect Seth Falcon Wishlist: Vignettes on CRAN Gabor Grothendieck Wishlist: Vignettes on CRAN Dirk Eddelbuettel Wishlist: Vignettes on CRAN Gabor Grothendieck Wishlist: Vignettes on CRAN Peter Ruckdeschel confused by inheritance... Henrik Bengtsson UseMethod infelicity Bill Dunlap Changing the generic of as.data.frame Spencer Graves Wishlist: Vignettes on CRAN McGehee, Robert Wishlist: Vignettes on CRAN Brian Ripley Sys.setlocale upsets windows graphics device (PR#8887) Brian Ripley Changing the generic of as.data.frame Bill Dunlap Changing the generic of as.data.frame Johannes Ranke (PR#8877) Literature for proposed fix Ei-ji Nakama Sys.setlocale upsets windows graphics device (PR#8887) Brian Ripley ssize_t not defined in sockconn.c (PR#8889) Marc Schwartz ssize_t not defined in sockconn.c (PR#8889) Peter Dalgaard ssize_t not defined in sockconn.c (PR#8889) wade.rogers at ciradiscovery.com ssize_t not defined in sockconn.c (PR#8889) Brian Ripley R CMD check problem Florian Hahne rerender tcltk toplevel robin hankin R CMD check problem Brian Ripley Changing the generic of as.data.frame Peter Dalgaard rerender tcltk toplevel Florian Hahne rerender tcltk toplevel Brian Ripley Sys.setlocale upsets windows graphics device (PR#8887) Brian Ripley Sys.setlocale upsets windows graphics device (PR#8887) Edward McNeil Sys.setlocale upsets windows graphics device (PR#8887) Brian Ripley Sys.setlocale upsets windows graphics device (PR#8887) Martin Maechler Suggesting changes to HELP files? Edward McNeil Sys.setlocale upsets windows graphics device (PR#8887)

Sunday, May 21, 2006 17 emails

Saturday, May 20, 2006 5 emails

Brian Ripley increase size of the limit of memory (PR#8885) zhou at stat.columbia.edu increase size of the limit of memory (PR#8885) Johannes Ranke (PR#8877) predict.lm does not have a weights argument for newdata Brian Ripley UseMethod infelicity Duncan Murdoch Negatives density values (PR#8876)

Friday, May 19, 2006 23 emails

Jason Foster Memory allocator on OS/X Simon Urbanek Memory allocator on OS/X Jason Foster Memory allocator on OS/X Dan Kelley PR#8822 eNews at 3rdmill.com Innovative Enterprise Microarray Software eNews at 3rdmill.com Innovative Enterprise Microarray Software mschwartz at mn.rr.com Possible issue with make install (PR#8883) hornyaks at mail.nih.gov Possible issue with make install (PR#8883) Ross Boylan S4 classes and C willylotto at virgilio.it I: L.D.L (PR#8881) Kevin B. Hendricks helping out Peter Dalgaard helping out Brian Ripley UseMethod infelicity Roger D. Peng delayedAssign and interrupts Duncan Murdoch delayedAssign and interrupts Duncan Murdoch delayedAssign and interrupts Luke Tierney delayedAssign and interrupts Duncan Murdoch delayedAssign and interrupts Brian Ripley helping out Roger D. Peng delayedAssign and interrupts prechelt at inf.fu-berlin.de ?attr: wrong parameter name (PR#8880) Brian Ripley Non-ASCII chars in R code Martin Maechler S4 classes and C

Thursday, May 18, 2006 26 emails

Seth Falcon Recommended style with calculator and persistent data Seth Falcon S4 classes and C B. Boonstra Convention difference in tseries.maxdrawdown (PR#8872) Ross Boylan Recommended style with calculator and persistent data Deepayan Sarkar Trellis equivalent of par(ask=TRUE)? Ross Boylan S4 classes and C Thomas Lumley helping out McGehee, Robert S4 classes and C Ross Boylan S4 classes and C Lutz Prechelt Trellis equivalent of par(ask=TRUE)? Paul Gilbert helping out Paul Gilbert R-devel and PGI 6.0 compile error pinard at iro.umontreal.ca Truncated labels in hist (PR#8864) Kevin B. Hendricks helping out Johannes Ranke predict.lm does not have a weights argument for newdata (PR#8877) Cuvelier Etienne Negatives density values (PR#8876) Brian Ripley R CMD check: checking examples: how to (not) pause execution Paul Gilbert R CMD check: checking examples: how to (not) pause execution Thomas Lumley anova F-tests (PR#8875) Adrian Trapletti Convention difference in tseries.maxdrawdown (PR#8872) Lutz Prechelt R CMD check: checking examples: how to (not) pause execution benfitz at utk.edu anova F-tests (PR#8875) Martin Maechler Noncentral dt() with tiny 'x' values (PR#8874) Brian Ripley R CMD check: "T used instead of TRUE" Lutz Prechelt R CMD check: "T used instead of TRUE" Brian Ripley 'R CMD config' doesn't work on Windows

Wednesday, May 17, 2006 31 emails

Brian Ripley Documentation for taper in spec.taper (PR#8871) Brian Ripley 'R CMD config' doesn't work on Windows juha.heljoranta at iki.fi prcomp: problem with zeros? (PR#8870) Seth Falcon 'R CMD config' doesn't work on Windows Duncan Murdoch install.packages bug (PR#8873) Duncan Murdoch 'R CMD config' doesn't work on Windows meredith at easynet.co.uk Noncentral dt() with tiny 'x' values (PR#8874) François Pinard ?hist and $density explanation Seth Falcon 'R CMD config' doesn't work on Windows Hervé Pagès 'R CMD build' ignoring segfaults occuring during the vignettes creation tdhock at OCF.Berkeley.EDU install.packages bug (PR#8873) Hervé Pagès 'R CMD ' doesn't work on Windows Hervé Pagès 'R CMD config' doesn't work on Windows Gabor Grothendieck Convention difference in tseries.maxdrawdown (PR#8872) rproject at boonstra.org Convention difference in tseries.maxdrawdown (PR#8872) stein at galton.uchicago.edu Documentation for taper in spec.taper (PR#8871) Jari Oksanen prcomp: problem with zeros? (PR#8870) Brian Ripley prcomp: problem with zeros? (PR#8870) juha.heljoranta at iki.fi prcomp: problem with zeros? (PR#8870) Brian Ripley Non-ASCII chars in R code Duncan Murdoch optim "CG" bug w/patch proposal (PR#8786) Brian Ripley R CMD SHLIB Thomas Lumley protect/unprotect howto in C code Brian Ripley optim "CG" bug w/patch proposal (PR#8786) Bill Dunlap R CMD SHLIB Michael Dondrup protect/unprotect howto in C code Martin Maechler optim "CG" bug w/patch proposal (PR#8786) Thomas Lumley protect/unprotect howto in C code Peter Dalgaard R 2.3.1 scheduled for June 1 Gerhard Thallinger str() with attr(*, "names") is extremely slow for long vectors Michael Dondrup protect/unprotect howto in C code

Tuesday, May 16, 2006 18 emails

Brian Ripley R CMD SHLIB Martin Maechler R CMD SHLIB Vincent Goulet New probability law functions Rafal Kustra bug in rbind.data.frame with factors (PR#8868) Brian Ripley bug in rbind.data.frame with factors (PR#8868) Rafal Kustra bug in rbind.data.frame with factors (PR#8868) Peter Ehlers bug in rbind.data.frame with factors (PR#8868) rafalku at gmail.com bug in rbind.data.frame with factors (PR#8868) Thomas Lumley R CMD SHLIB Brian Ripley R CMD SHLIB Brian Ripley Problems on SuSE 10.1 (was Cofnigure (Building) trouble) Brandon Barker Cofnigure (Building) trouble Duncan Murdoch optim "CG" bug w/patch proposal (PR#8786) François Pinard Truncated labels in hist (PR#8864) Hin-Tak Leung (PR#8861) Memory allocation fails in R 2.2.1 and R 2.3.0 on SGI Irix, while plenty of memory available Brian Ripley (PR#8861) Memory allocation fails in R 2.2.1 and R 2.3.0 on SGI Irix, while plenty of memory available westfeld at inf.tu-dresden.de optim "CG" bug w/patch proposal (PR#8786) Brian Ripley optim "CG" bug w/patch proposal (PR#8786)

Monday, May 15, 2006 13 emails

Duncan Murdoch Truncated labels in hist (PR#8864) Martin Morgan R CMD check does not remove all S4 methods defined in examples pinard at iro.umontreal.ca Truncated labels in hist (PR#8864) Seth Falcon bindingIsLocked returns illogical logical Mirjam van Vroonhoven (PR#8861) Memory allocation fails in R 2.2.1 and R 2.3.0 on SGI Irix, while plenty of memory available Brian Ripley bindingIsLocked returns illogical logical Seth Falcon bindingIsLocked returns illogical logical Brian Ripley (PR#8861) Memory allocation fails in R 2.2.1 and R 2.3.0 on SGI Irix, while plenty of memory available Thomas Lumley Memory allocation fails in R 2.2.1 and R 2.3.0 on SGI Irix, (PR#8862) Thomas Lumley Memory allocation fails in R 2.2.1 and R 2.3.0 on SGI Irix, while plenty of memory available (PR#8861) m.vroonhoven at erasmusmc.nl Memory allocation fails in R 2.2.1 and R 2.3.0 on SGI Irix, while plenty of memory available (PR#8861) Hin-Tak Leung Error Compiling RMySQL in Fedora Core 5 86x64 Brian Ripley bindingIsLocked returns illogical logical

Sunday, May 14, 2006 8 emails

Seth Falcon bindingIsLocked returns illogical logical François Pinard Suggestion for system.time() Seth Falcon Suggestion for system.time() François Pinard Suggestion for system.time() Seth Falcon Suggestion for system.time() Martin Morgan bindingIsLocked returns illogical logical François Pinard Suggestion for system.time() Gerhard Thallinger str() with attr(*, "names") is extremely slow for long vectors

Saturday, May 13, 2006 10 emails

Duncan Temple Lang reusing routines Juan Santiago Ramseyer Error Compiling RMySQL in Fedora Core 5 86x64 François Pinard Mere chat on vectorisation matters Duncan Murdoch windows( ... ,rescale="fixed") bug (PR#8857) Duncan Murdoch windows( ... ,rescale="fixed") bug (PR#8857) Duncan Murdoch windows( ... ,rescale="fixed") bug (PR#8857) Gerhard.Thallinger at tugraz.at windows( ... ,rescale="fixed") bug (PR#8857) Martin Maechler str() with attr(*, "names") is extremely slow for long vectors John Chambers S4 initialize methods, unexpected recursive callNextMethod Gerhard Thallinger str() with attr(*, "names") is extremely slow for long vectors

Friday, May 12, 2006 12 emails

Gabor Grothendieck reusing routines Terry Therneau reusing routines Brian Ripley R-2.3.0 make error on AIX 5.2 Sheth, Jagat K R-2.3.0 make error on AIX 5.2 Peter Dalgaard wilcox.exact function (PR#8856) pat.hodgson at sympatico.ca wilcox.exact function (PR#8856) Brian Ripley Dropping dimnames doesn't matter (anymore)? Brian Ripley X11 and vfonts modules on AIX 5.2 Brian Ripley R-2.3.0 make error on AIX 5.2 Bjørn-Helge Mevik Dropping dimnames doesn't matter (anymore)? Sheth, Jagat K R-2.3.0 make error on AIX 5.2 Sheth, Jagat K X11 and vfonts modules on AIX 5.2

Thursday, May 11, 2006 13 emails

Natasha Scott Lfie Expirecene Deeergs Paul Gilbert PGI 6.1 compile error Brian Ripley @ accesses attributes, not just formal slots ? Seth Falcon S4 initialize methods, unexpected recursive callNextMethod Parlamis Franklin @ accesses attributes, not just formal slots ? Uwe Ligges bug report - cor (PR#8852) daniel.oshea at dnr.state.mn.us bug report - cor (PR#8852) John Chambers S4 initialize methods, unexpected recursive callNextMethod Brian Ripley Question about match.fun() Brian Ripley (PR#8824) wishlist: summary for regression models to report Brian Ripley Allowed quasibinomial links (PR#8851) Brian Ripley 2.3.0 make install fails on solaris Simon Urbanek suppressing "global" cppflags in an individual package

Wednesday, May 10, 2006 17 emails

Kasper Daniel Hansen suppressing "global" cppflags in an individual package Gabor Grothendieck What is callGeneric used for? Seth Falcon S4 initialize methods, unexpected recursive callNextMethod Peter Dalgaard 2.3.0 make install fails on solaris Don MacQueen RFC: log='z' for image, contour, persp? Darin Perusich 2.3.0 make install fails on solaris Henric Nilsson Allowed quasibinomial links (PR#8851) Seth Falcon What is callGeneric used for? François Pinard Mere chat on vectorisation matters Hadley Wickham Warning: use of NULL environment is deprecated (in R CMD check) Paul Roebuck array dimname argument (was Re: YA S4 method dispatch question) Duncan Murdoch Warning: use of NULL environment is deprecated (in R CMD check) Duncan Murdoch RFC: log='z' for image, contour, persp? Hin-Tak Leung suppressing "global" cppflags in an individual package Hadley Wickham Warning: use of NULL environment is deprecated (in R CMD check) Martin Maechler RFC: log='z' for image, contour, persp? Shawn Mikula R, Rcmdr crash on WinXP PRO laptop (PR#8583)

Tuesday, May 9, 2006 19 emails

Jani.Erola at tukkk.fi R, Rcmdr crash on WinXP PRO laptop (PR#8583) Martin Morgan YA S4 method dispatch question Duncan Murdoch RFC: log='z' for image, contour, persp? Simon Urbanek suppressing "global" cppflags in an individual package Paul Roebuck YA S4 method dispatch question Kasper Daniel Hansen suppressing "global" cppflags in an individual package McGehee, Robert Typo in getAllMethods() (PR#8848) Hin-Tak Leung suppressing "global" cppflags in an individual package Duncan Murdoch "Unfelicity" :-) with edit() François Pinard "Unfelicity" :-) with edit() Brian Ripley Seg fault when installing package from bad repository Peter Dalgaard combn(n, k, ...) and all its re-inventions Brian Ripley Rmpi instlation problem (PR#8846) ebarreto at igc.gulbenkian.pt Rmpi instlation problem (PR#8846) Hadley Wickham Seg fault when installing package from bad repository Martin Maechler combn(n, k, ...) and all its re-inventions Hadley Wickham Seg fault when installing package from bad repository Brian Ripley Efficient Merging of two huge sorted data frames?---Use merge()? Berwin A Turlach Question about match.fun()

Monday, May 8, 2006 11 emails

Duncan Murdoch "Unfelicity" :-) with edit() François Pinard "Unfelicity" :-) with edit() Charles Cheung Efficient Merging of two huge sorted data frames?---Use merge()? Peter Dalgaard mean of complex vector (PR#8842) john.peters at nmi.gov.au mean of complex vector (PR#8842) Brian Ripley Inconsistency in AIC values for glm with family poisson (PR#8841) Uwe Ligges Patch for r-intro to update xgobi to ggobi Uwe Ligges Patch for r-intro to update xgobi to ggobi Hadley Wickham Patch for r-intro to update xgobi to ggobi Sole Acha, Xavi Inconsistency in AIC values for glm with family poisson (PR#8840) Martin Maechler str() with attr(*, "names") is extremely slow for long vectors

Saturday, May 6, 2006 4 emails

marina.saadia at freesbee.fr Bug solved / Re: irr package exits (PR#8839) Brian Ripley irr package exits (PR#8839) marina.saadia at freesbee.fr irr package exits (PR#8839) Duncan Murdoch R 2.3.0 and rgl on OS X 10.4.6

Friday, May 5, 2006 15 emails

Simon Urbanek R 2.3.0 and rgl on OS X 10.4.6 (PR#8833) Simon Urbanek Data editor in Mac OS X (PR#8837) Henrik Bengtsson str() with attr(*, "names") is extremely slow for long vectors Kasper Daniel Hansen suppressing "global" cppflags in an individual package Martin Maechler Including a single function from a package Seth Falcon Including a single function from a package udr-core at stat.math.ethz.ch hey sis! Brian Ripley Including a single function from a package Ken Kelley Including a single function from a package Duncan Murdoch Including a single function from a package Brian Ripley Including a single function from a package Ken Kelley Including a single function from a package Duncan Murdoch `power' documentation slip (PR#8838) Antonio, Fabio Di Narzo plot.ts bad default labelling and lag.plot incomplete doc Simon Wood `power' documentation slip (PR#8838)

Thursday, May 4, 2006 14 emails

jason_rogers at wsu.edu Data editor in Mac OS X (PR#8837) Gabor Grothendieck Rgui, Startup, HOME, R_USER, ... Duncan Murdoch Rgui, Startup, HOME, R_USER, ... Duncan Murdoch ! Gabor Grothendieck Rgui, Startup, HOME, R_USER, ... Henrik Bengtsson Rgui, Startup, HOME, R_USER, ... Brian Ripley Cox survival model Duncan Murdoch R 2.3.0 and rgl on OS X 10.4.6 (PR#8833) eatkinso at mdanderson.org R 2.3.0 and rgl on OS X 10.4.6 (PR#8833) Thomas Lumley Cox survival model Gregory Kotler Cox survival model Kurt Hornik proposed modifications to deprecated Ollie Sewell yo stop work today Kurt Hornik abline and its documentation

Wednesday, May 3, 2006 10 emails

Duncan Murdoch Aggregate? Gabor Grothendieck Aggregate? Roger D. Peng Aggregate? Gabor Grothendieck Aggregate? François Pinard abline and its documentation Spencer Graves as.factor: changed behaviour for Date class Sébastien Bihorel R freezes under Windows while loading package Duncan Murdoch R freezes under Windows while loading package Sébastien Bihorel R freezes under Windows while loading package Martin Maechler cannot use fanny in package cluster (PR#8830)

Tuesday, May 2, 2006 15 emails

Uwe Ligges Histogram to pdf file (PR#8829) Uwe Ligges cannot use fanny in package cluster (PR#8830) ghuang at stat.nctu.edu.tw cannot use fanny in package cluster (PR#8830) Simon Urbanek Force action in package install? Simon Urbanek Force action in package install? Simon Urbanek Installation problem of R.app GUI 1.15 for R 2.3.0 (PR#8828) ksawery.pasciak at gmail.com Histogram to pdf file (PR#8829) Brian Ripley normal random number generator in R Tibshirani normal random number generator in R dupan at northwestern.edu Installation problem of R.app GUI 1.15 for R 2.3.0 (PR#8828) Duncan Murdoch Force action in package install? Roger Bivand Call trellis function in a function (PR#8827) Fan Call trellis function in a function (PR#8827) Peter Ruckdeschel optimize() and extrema at the interval bounds Brian Ripley row.names != rownames for data.frame?

Monday, May 1, 2006 10 emails

Martin Maechler plot cdf Gabor Grothendieck expression objects Parlamis Franklin expression objects Parlamis Franklin methods for @ operator François Pinard plot cdf Seth Falcon row.names != rownames for data.frame? Brian Ripley format.info() versus format.default(): Comments please Duncan Murdoch format.info() versus format.default(): Comments please Martin Maechler example(ask = .) - default ? Ulrike Grömping wishlist: summary for regression models to report number of omitted cases because of NAs (PR#8824)

R-devel May 2006