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R-devel June 2007

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Saturday, June 30, 2007 3 emails
Douglas Bates GPL 3 has been released Brian Ripley make check for 2.5.1 RC fails on mbcsToSbcs in graphics Petr Savicky make check for 2.5.1 RC fails on mbcsToSbcs in graphics
Friday, June 29, 2007 8 emails
Romain Francois graphic for the R profiler Romain Francois graphic for the R profiler Roger D. Peng saving objects with embedded environments Ben Bolker sweep sanity checking? automorphism at gmail.com Shapiro Test P Value Incorrect? (PR#9768) sneumann at pubhealth.ku.dk R CMD build with mingw and msys (PR#9766) Peter Ruckdeschel inaccuracy in qbinom with partial argument matching Petr Savicky inaccuracy in qbinom with partial argument matching
Thursday, June 28, 2007 14 emails
Brian Ripley inaccuracy in qbinom with partial argument matching Simon Blomberg navel-gazing agalecki at umich.edu Bug in varIdent (nlme package) (PR#9765) McGehee, Robert saving objects with embedded environments Peter Ruckdeschel inaccuracy in qbinom with partial argument matching Peter Ruckdeschel minor flaw in integrate() Brian Ripley How to set R_CStackLimit Sébastien Bihorel error message from lmer Brian Ripley signature() and setMethod() problems Thomas Lumley navel-gazing Martin Maechler signature() and setMethod() problems robin hankin signature() and setMethod() problems Xiaoning How to set R_CStackLimit zhangxiaoning Question on the R's C stack limit
Wednesday, June 27, 2007 14 emails
Brian Ripley error message from lmer Ben Bolker navel-gazing Mark Bravington rbind.data.frame changes Sébastien Bihorel error message from lmer Richard M. Heiberger possible bug in conflicts() (PR#9760) Brian Ripley make check for 2.5.1 RC fails on mbcsToSbcs in graphics Peter Dalgaard make check for 2.5.1 RC fails on mbcsToSbcs in graphics Brian Ripley make check for 2.5.1 RC fails on mbcsToSbcs in graphics Petr Savicky make check for 2.5.1 RC fails on mbcsToSbcs in graphics Brian Ripley trivial typo in ?ks.test (PR#9759) Dirk Eddelbuettel Rmpi and OpenMPI ? Markus Schmidberger Rmpi and OpenMPI ? Brian Ripley inherits() and virtual classes robin hankin inherits() and virtual classes
Tuesday, June 26, 2007 28 emails
Brian Ripley Bug in getVarCov.gls method (PR#9752) Brian Ripley slight anomaly in formals<- ? (PR#9758) Ben Bolker trivial typo in ?ks.test (PR#9759) Martin Maechler "Math" group generics for S4, and a bug Martin Maechler "Math" group generics for S4, and a bug John Chambers "Math" group generics for S4, and a bug Brian Ripley Behaviour of mle and environments or calling mle inside a function Brian Ripley "Math" group generics for S4, and a bug Martin Maechler "Math" group generics for S4, and a bug Georgi Boshnakov slight anomaly in formals<- ? (PR#9758) Duncan Murdoch conflict between lme4 and RMySQL packages (PR#9753) Brian Ripley possible bug in 'scan' Dan Davison possible bug in 'scan' Benjamin Tyner possible bug in 'scan' agalecki at umich.edu Bug in getVarCov.gls method (PR#9752) Iago Mosqueira Behaviour of mle and environments or calling mle inside a function Greg Snow possible bug in 'scan' Benjamin Tyner possible bug in 'scan' Petr Savicky R 2.5.0 refuses to print enough digits to recover exact floating point values Martin Maechler conflict between lme4 and RMySQL packages (PR#9753) S Ellison boxplot and bxp do not respect xlim by default (PR#9756) Duncan Murdoch boxplot and bxp do not respect xlim by default (PR#9754) Duncan Murdoch boxplot and bxp do not respect xlim by default (PR#9754) s.ellison at lgc.co.uk boxplot and bxp do not respect xlim by default (PR#9754) Brian Ripley conflict between lme4 and RMySQL packages (PR#9753) Martin Maechler conflict between lme4 and RMySQL packages (PR#9753) Brian Ripley Bug in getVarCov.gls method (PR#9752) Brian Ripley R routine standalone
Monday, June 25, 2007 10 emails
Tong Wang linking problem dale.barr at ucr.edu conflict between lme4 and RMySQL packages (PR#9753) Gatsu R routine standalone agalecki at umich.edu Bug in getVarCov.gls method (PR#9752) Brian Ripley There was a problem by the use of snow. Ei-ji Nakama There was a problem by the use of snow. Brian Ripley There was a problem by the use of snow. Ei-ji Nakama problem gsub in the locale of CP932 and SJIS (PR#9751) Brian Ripley problem gsub in the locale of CP932 and SJIS (PR#9751) Brian Ripley errors in compiling R-2.5.0 and R-2.4.0[sec=unclassified]
Sunday, June 24, 2007 3 emails
Mohar Chattopadhyay errors in compiling R-2.5.0 and R-2.4.0[sec=unclassified] Ei-ji Nakama There was a problem by the use of snow. Ei-ji Nakama problem gsub in the locale of CP932 and SJIS (PR#9751)
Saturday, June 23, 2007 3 emails
Ben Bolker nonlinear fitting documentation error (PR#9749) Uwe Ligges putting binary files in a package Gregory R. Warnes error in building rpy in linux power-pc[sec=unclassified]
Friday, June 22, 2007 13 emails
Ben Bolker putting binary files in a package bkerin at fastmail.fm nonlinear fitting documentation error (PR#9749) Martin Maechler two bessel function bugs for nu<0 Martin Maechler R 2.5.0 - Typo in commandArgs.Rd S Ellison Boxplot issues (formerly posted to R-help in error) François Pinard R 2.5.0 - Typo in commandArgs.Rd Brian Ripley Cross-platform check for internet connection Hadley Wickham Cross-platform check for internet connection Brian Ripley Cross-platform check for internet connection Hin-Tak Leung Compile error on a 'scratch' linux distro Brian Ripley Compile error on a 'scratch' linux distro Dan Bolser Compile error on a 'scratch' linux distro Hadley Wickham Cross-platform check for internet connection
Thursday, June 21, 2007 9 emails
Brian Ripley segfault during cbind Martin Morgan segfault during cbind Brian Ripley segfault during cbind Martin Morgan segfault during cbind Brian Ripley Basic Question on error(_(... Martin Morgan segfault during cbind Peter Dalgaard Basic Question on error(_(... statmobile at gmail.com Basic Question on error(_(... Brian Ripley extending package with function calling an Objective Caml program
Wednesday, June 20, 2007 10 emails
Hin-Tak Leung X11 help please Joe Conway clients and carriage returns Brian Ripley clients and carriage returns Marc Schwartz Expected behavior from: all(c(NA, NA, NA) < NA, na.rm = TRUE)? Joe Conway clients and carriage returns Thomas Lumley Expected behavior from: all(c(NA, NA, NA) < NA, na.rm = TRUE)? Peter Dalgaard Expected behavior from: all(c(NA, NA, NA) < NA, na.rm = TRUE)? Marc Schwartz Expected behavior from: all(c(NA, NA, NA) < NA, na.rm = TRUE)? Tamara Steijger extending package with function calling an Objective Caml program Peter Dalgaard Error in funcion distancia() in package dprep(v1.0) (PR#9745)
Tuesday, June 19, 2007 3 emails
kyousan at sina.com Error in funcion distancia() in package dprep(v1.0) (PR#9745) Duncan Murdoch X11 help please robin hankin two bessel function bugs for nu<0
Monday, June 18, 2007 7 emails
Peter Dalgaard X11 help please Duncan Murdoch X11 help please Hiroyuki Kawakatsu two bessel function bugs for nu<0 Luke Tierney package check note: no visible global function definition (in functions using Tcl/Tk) Duncan Murdoch X11 help please Duncan Murdoch X11 help please Hin-Tak Leung X11 help please
Sunday, June 17, 2007 3 emails
Brian Ripley X11 help please Duncan Murdoch X11 help please John Chambers Missing args with a default value in S4 methods
Saturday, June 16, 2007 2 emails
Brian Ripley bug in R environments? Was: [BioC] 'recursive default argument' error... Duncan Murdoch readchar() bug or feature? was Re: Clarification for readChar man page
Friday, June 15, 2007 7 emails
Carsten.Botts at williams.edu more help with 'inline' package Hervé Pagès Missing args with a default value in S4 methods McGehee, Robert NaN in crossprod Brian Ripley LAPACK Headers statmobile at gmail.com LAPACK Headers Jeffrey Horner readchar() bug or feature? was Re: Clarification for readChar man page John Chambers Missing args with a default value in S4 methods
Thursday, June 14, 2007 12 emails
Brian Ripley LAPACK Headers statmobile at gmail.com LAPACK Headers Hin-Tak Leung LAPACK Headers statmobile at gmail.com LAPACK Headers Bill Dunlap package check note: no visible global function definition (in functions using Tcl/Tk) Jeffrey Horner readchar() bug or feature? was Re: Clarification for readChar man page Hervé Pagès Missing args with a default value in S4 methods Jeffrey Horner Clarification for readChar man page Brian Ripley package check note: no visible global function definition (in functions using Tcl/Tk) Duncan Murdoch Clarification for readChar man page Jeffrey Horner Clarification for readChar man page Martin Maechler Test for Equality of Coefficient of Variation
Wednesday, June 13, 2007 12 emails
Seth Falcon PATCH: install inst/ before doing lazyload on Windows Hervé Pagès R.INSTALL on Windows Gavin Simpson step() in sink() and Sweave() Ross Boylan Reported invalid memory references Gregory Kotler Test for Equality of Coefficient of Variation Peter Dalgaard R 2.5.1 scheduled for June 28 Seth Falcon step() in sink() and Sweave() Brian Ripley (PR#9733) subset() only returns first of equally named Friedrich Leisch step() in sink() and Sweave() Jari Oksanen step() in sink() and Sweave() Gavin Simpson step() in sink() and Sweave() beierm at uni-duesseldorf.de subset() only returns first of equally named columns from a data.frame (PR#9733)
Tuesday, June 12, 2007 14 emails
stefano iacus R CMD SHLIB error using OS X Seth Falcon PATCH: install inst/ before doing lazyload on Windows Brian Ripley Warning under R 2.6.0: Rd files with unknown encoding Peter Dalgaard Warning under R 2.6.0: Rd files with unknown encoding Martin Maechler small typo in NEWS Seth Falcon bug in R environments? Was: [BioC] 'recursive default argument' error... Ben Bolker small typo in NEWS John Fox Warning under R 2.6.0: Rd files with unknown encoding Brian Ripley Warning under R 2.6.0: Rd files with unknown encoding John Fox Warning under R 2.6.0: Rd files with unknown encoding Brian Ripley bug in R environments? Was: [BioC] 'recursive default argument' error... Jari Oksanen package check note: no visible global function definition (in functions using Tcl/Tk) Brian Ripley compiler usage after successful UNIX build Oleg Sklyar bug in R environments? Was: [BioC] 'recursive default argument' error...
Monday, June 11, 2007 8 emails
Henrik Bengtsson package check note: no visible global function definition (in functions using Tcl/Tk) Thomas Petzoldt package check note: no visible global function definition (in functions using Tcl/Tk) Louisell, Paul compiler usage after successful UNIX build Qiong Yang cannot wrap lmekin function Seth Falcon package check note: no visible global function definition (in functions using Tcl/Tk) Brian Ripley package check note: no visible global function definition (in functions using Tcl/Tk) Thomas Petzoldt package check note: no visible global function definition (in functions using Tcl/Tk) Tim Bergsma suggested package not found
Saturday, June 9, 2007 3 emails
Brian Ripley suggested package not found Tim Bergsma suggested package not found Duncan Murdoch suggested package not found
Friday, June 8, 2007 5 emails
Tim Bergsma suggested package not found Simon Urbanek R CMD SHLIB error using OS X Richard Zur R CMD SHLIB error using OS X Brian Ripley Question about Running C code from R Marthews, T. R. Question about Running C code from R
Thursday, June 7, 2007 8 emails
Seth Falcon missing IntegerFromString() Brian Ripley missing IntegerFromString() Vincent Goulet C function with unknown output length Aniko Szabo missing IntegerFromString() Brian Ripley missing IntegerFromString() Brian Ripley missing IntegerFromString() Simon Urbanek missing IntegerFromString() Douglas Bates missing IntegerFromString()
Wednesday, June 6, 2007 12 emails
software at iangregory.com Update help file (PR#9724) Marc Schwartz Quick notes on R with F7 Bill Dunlap C function with unknown output length Hin-Tak Leung Quick notes on R with F7 Hervé Pagès C function with unknown output length Gavin Simpson Quick notes on R with F7 Dirk Eddelbuettel C function with unknown output length Vincent Goulet C function with unknown output length Brian Ripley Quick notes on R with F7 Marc Schwartz Quick notes on R with F7 Aniko Szabo missing IntegerFromString() Brian Ripley Can configure.ac detect 64 bit R?
Tuesday, June 5, 2007 9 emails
Seth Falcon missing IntegerFromString() Jari Oksanen 'R CMD INSTALL mypkg' doesn't always update help pages Hervé Pagès 'R CMD INSTALL mypkg' doesn't always update help pages Deepayan Sarkar HTML vignette browser Aaron A. King documenting S4 replacement methods Jeffrey J. Hallman Can configure.ac detect 64 bit R? Roger D. Peng HTML vignette browser Friedrich Leisch HTML vignette browser Uwe Ligges setClass with a slot of RODBC
Monday, June 4, 2007 10 emails
adschai at optonline.net setClass with a slot of RODBC Deepayan Sarkar HTML vignette browser Aniko Szabo missing IntegerFromString() Brian Ripley HTML vignette browser Robert Gentleman HTML vignette browser Deepayan Sarkar HTML vignette browser Seth Falcon HTML vignette browser Spencer Graves nls problems Friedrich Leisch HTML vignette browser Petr Savicky Determinant function (PR#9715)
Saturday, June 2, 2007 2 emails
adschai at optonline.net setClass with a slot of RODBC Patrick Burns Debug with set.seed()
Friday, June 1, 2007 10 emails
Deepayan Sarkar HTML vignette browser Tong Wang Debug with set.seed() Brian Ripley Question on the R's C stack limit Stephen B. Weston Possible changes to connections krys at maths.lth.se Determinant function (PR#9715) Simon Urbanek Question on the R's C stack limit Brian Ripley Question on the R's C stack limit Ev Whin Question on the R's C stack limit Brian Ripley Problem building R from source on Windows Byron Ellis Possible changes to connections
Thursday, May 31, 2007 2 emails
Brian Ripley Possible changes to connections mel Possible changes to connections