R-devel - January 2009 - Date View

Saturday, January 31, 2009 12 emails

Duncan Murdoch (PR#8192) [ subscripting sometimes loses names John Chambers Inherited Methods in r-devel (for package maintainers mainly) Wacek Kusnierczyk (PR#8192) [ subscripting sometimes loses names Christian Brechbühler (PR#8192) [ subscripting sometimes loses names Dirk Eddelbuettel Side-effects of require() vs library() on x86_64 aka amd64 Seth Falcon Side-effects of require() vs library() on x86_64 aka amd64 Peter Dalgaard Side-effects of require() vs library() on x86_64 aka amd64 Dirk Eddelbuettel Side-effects of require() vs library() on x86_64 aka amd64 Peter Dalgaard (PR#8192) [ subscripting sometimes loses names Seth Falcon Side-effects of require() vs library() on x86_64 aka amd64 Duncan Murdoch (PR#8192) [ subscripting sometimes loses names Andrew Piskorski (PR#8192) [ subscripting sometimes loses names

Friday, January 30, 2009 13 emails

Dirk Eddelbuettel Side-effects of require() vs library() on x86_64 aka amd64 Nicholas L Crookston In Rd: \describe \itemize and \item Duncan Murdoch In Rd: \describe \itemize and \item Nicholas L Crookston In Rd: \describe \itemize and \item Tony Plate (PR#13487) Segfault when mistakenly calling [.data.frame Simon Urbanek (PR#13487) Segfault when mistakenly calling [.data.frame Christian Brechbühler (PR#13487) Segfault when mistakenly calling [.data.frame Achim Zeileis "Panel Data Unit Root tests" Brian Ripley Methods not loaded in R-Devel vs 2.8.1 Pfaff, Bernhard Dr. Methods not loaded in R-Devel vs 2.8.1 Pfaff, Bernhard Dr. Methods not loaded in R-Devel vs 2.8.1 Patrick Burns length of POSIXlt object (PR#13482) Jose Iparraguirre D'Elia "Panel Data Unit Root tests"

Thursday, January 29, 2009 11 emails

Peter Cowan How to generate a xyplot with multiple panels using an empty data frame ? Daniel Kornhauser How to generate a xyplot with multiple panels using an empty data frame ? Duncan Murdoch In Rd: \describe \itemize and \item Nicholas L Crookston In Rd: \describe \itemize and \item Brian Ripley (PR#13487) Segfault when mistakenly calling [.data.frame Jeff Ryan length of POSIXlt object (PR#13482) Mauro Andreolini Arima_Like() and NaN - a (possible) problem, a patch, and RFC Christian Brechbühler Segfault when mistakenly calling [.data.frame (PR#13487) Sklyar, Oleg (London) after some time R stopped returning from Rmpi calls mcintosh at research.telcordia.com arima error calling optim (PR#13485) Benjamin Leblanc File and console output does not work in C code

Wednesday, January 28, 2009 9 emails

Dirk Eddelbuettel Side-effects of require() vs library() on x86_64 aka amd64 twoutopias at gmail.com length of POSIXlt object (PR#13482) Benjamin Leblanc File and console output does not work in C code Brian Ripley File and console output does not work in C code Jeffrey Horner Recommendations for next maintenance release of RMySQL Benjamin Leblanc File and console output does not work in C code Kjetil Halvorsen asypow cran package Martin Schlather uninitialised value in R (PR#13476) Mathieu Ribatet uninitialised value in R (PR#13476)

Tuesday, January 27, 2009 15 emails

John Chambers Inherited Methods in r-devel (for package maintainers mainly) Martin Schlather uninitialised value in R (PR#13476) Duncan Murdoch Package (PR#13475) William Dunlap Package (PR#13475) Mathieu Ribatet uninitialised value in R (PR#13476) Duncan Murdoch Package (PR#13475) Simon Urbanek small bug in base::formatC (PR#13474) Jon Senior Return values from .Call and garbage collection Martin Schlather uninitialised value in R (PR#13476) partho_bhowmick at ml.com Package (PR#13475) bernd_bischl at gmx.net small bug in base::formatC (PR#13474) Sklyar, Oleg (London) Return values from .Call and garbage collection Duncan Murdoch Return values from .Call and garbage collection [Additional information added] Jon Senior Return values from .Call and garbage collection [Additional information added] Jon Senior Return values from .Call and garbage collection

Monday, January 26, 2009 10 emails

John Chambers Inherited Methods in r-devel (for package maintainers mainly) David Smith The Quality & Accuracy of R Muenchen, Robert A (Bob) The Quality & Accuracy of R Simon Urbanek can't load rJava in R 2.8.1 on Windows XP Petr Savicky bug in cor.test(method = "spearman") Duncan Murdoch can't load rJava in R 2.8.1 on Windows XP Duncan Murdoch can't load rJava in R 2.8.1 on Windows XP Martin Maechler str(<1d-array>) Brian Ripley loading RBlas.dll Brian Ripley Warning: closing unused connection 3

Sunday, January 25, 2009 8 emails

Stavros Macrakis Defining an iterator Luke Tierney Defining an iterator Martin Morgan Defining an iterator Peter Dalgaard The Quality & Accuracy of R John Chambers Defining an iterator Paul Murrell Automatic shortening of text to fit into area Dan Kelley Warning: closing unused connection 3 Stavros Macrakis Defining an iterator

Saturday, January 24, 2009 10 emails

Brian Ripley Automatic shortening of text to fit into area Sebastian Fischmeister Automatic shortening of text to fit into area Gabor Grothendieck Warning for dropped text with devices that don't support clipping (in text attachments) Sebastian Fischmeister Warning for dropped text with devices that don't support clipping (in text attachments) Sebastian Fischmeister Warning for dropped text with devices that don't support clipping sachin1234 loading RBlas.dll Yi Zhang overwriting '<-' and infinite recursions Muenchen, Robert A (Bob) The Quality & Accuracy of R Duncan Murdoch Possible Bug in file.show (PR#13469) Duncan Murdoch Possible Bug in file.show (PR#13469)

Friday, January 23, 2009 12 emails

Tony Plate overwriting '<-' and infinite recursions Luke Tierney overwriting '<-' and infinite recursions Douglas Bates "for" loop wiht S4 Objects Yi Zhang overwriting '<-' and infinite recursions Luke Tierney overwriting '<-' and infinite recursions Yi Zhang overwriting '<-' and infinite recursions Wolfgang Koller Possible Bug in file.show (PR#13469) Antonio, Fabio Di Narzo loading RBlas.dll Henrik Bengtsson Package impute exist in quite different version on CRAN and BioC Martin Morgan pass by reference for S4 Marc Schwartz str(<1d-array>) Martin Maechler str(<1d-array>)

Thursday, January 22, 2009 13 emails

Biczok Rudolf "for" loop wiht S4 Objects sachin1234 loading RBlas.dll Yan Wong Italics in svg output display as bold (PR#13463) Yetta Jager row.names in data.frame with row.names NULL Tony Plate x <- 1:2; dim(x) <- 2? A vector or not? Antonio, Fabio Di Narzo Accessing a c-level complicated structure from R Gavin Simpson pdf() and pch problems Scionforbai Accessing a c-level complicated structure from R Brian Ripley pdf() and pch problems Gavin Simpson pdf() and pch problems Martin Morgan encountering difficulty asking R to manipulate the correct columns in Expression Set class (object 4). (PR#13464) Brian Ripley Italics in svg output display as bold (PR#13463) Brian Ripley (PR#13464) encountering difficulty asking R to manipulate the correct columns in Expression Set class (object 4)

Wednesday, January 21, 2009 10 emails

guy.tillinghast at rivhs.com encountering difficulty asking R to manipulate the correct columns in Expression Set class (object 4). (PR#13464) William Dunlap typo in R-intro Yan Wong Italics in svg output display as bold (PR#13463) Uwe Ligges Bug in sub and gsub (PR#13460) banzaleon at gmail.com Bug in sub and gsub (PR#13460) Bengoechea Bartolomé Enrique (SIES 73) Embeding R Rainer Hurling Package Matrix does not compile in R-devel_2009-01-10 Brian Ripley Floating point excepting when cbind()ing a matrix of grobs (orenvironments) with a 0-column matrix Brian Ripley patch for textspecial and defaultfont in xfig Wacek Kusnierczyk patch for src/main/character.c

Tuesday, January 20, 2009 10 emails

Simon Urbanek Embeding R Brian Ripley Embeding R Sylvain Loiseau Embeding R Simon Urbanek Embeding R Sylvain Loiseau Embeding R Brian Ripley Package Matrix does not compile in R-devel_2009-01-10 Hiroyuki Kawakatsu Package Matrix does not compile in R-devel_2009-01-10 Keith Ponting work-around for debugger broken (by changed behaviour of get under R 2.8?) when functions have ... arguments Brian Ripley R bug or ghostscript bug or my bug? Brian Ripley sub and gsub treat \\ incorrectly (PR#13454)

Monday, January 19, 2009 14 emails

Brian Ripley Future support for cross-building for Windows Andriy Miranskyy sub and gsub treat \\ incorrectly (PR#13454) Charles C. Berry further notes on model.frame issue William Dunlap sub and gsub treat \\ incorrectly (PR#13454) Biczok Rudolf pass by reference for S4 ivo welch R bug or ghostscript bug or my bug? William Dunlap Floating point excepting when cbind()ing a matrix of grobs (orenvironments) with a 0-column matrix Terry Therneau further notes on model.frame issue amiransk at uwo.ca sub and gsub treat \\ incorrectly (PR#13454) Brian Ripley Hangup RGui with RMySQL (PR#13453) Sebastian Fischmeister patch for textspecial and defaultfont in xfig Hadley Wickham Floating point excepting when cbind()ing a matrix of grobs (or environments) with a 0-column matrix Dimitris Rizopoulos optim() example in relist() help page apfel.schmied at emaildienst.de Hangup RGui with RMySQL (PR#13453)

Sunday, January 18, 2009 5 emails

Brian Ripley patch for textspecial and defaultfont in xfig Sebastian Fischmeister patch for textspecial and defaultfont in xfig Rolf Turner Proposed mods to barplot.default() and legend(). Spencer Graves DierckxSpline segfault Terry Therneau A model pass-through function

Saturday, January 17, 2009 6 emails

Spencer Graves DierckxSpline segfault Martin Maechler x <- 1:2; dim(x) <- 2? A vector or not? Андрей Парамонов DierckxSpline segfault Petr Savicky bug in cor.test(method = "spearman") Duncan Murdoch 2009 Wish list for R Sean O'Riordain 2009 Wish list for R

Friday, January 16, 2009 4 emails

Felix Andrews interrupting R from a GUI Gabor Grothendieck 2009 Wish list for R Tony Plate x <- 1:2; dim(x) <- 2? A vector or not? Martin Maechler x <- 1:2; dim(x) <- 2? A vector or not?

Thursday, January 15, 2009 16 emails

Brian Ripley interrupting R from a GUI Felix Andrews interrupting R from a GUI Perry de Valpine Documentation suggestions for vignettes Gabor Grothendieck Documentation suggestions for vignettes Simon Urbanek Documentation suggestions for vignettes Peter Dalgaard R CMD check signals error on code that works from UI Sklyar, Oleg (London) R CMD check signals error on code that works from UI Paul Roebuck R CMD check signals error on code that works from UI Gabor Grothendieck Documentation suggestions for vignettes Perry de Valpine Documentation suggestions for vignettes Perry de Valpine Documentation suggestions for vignettes Paul Roebuck doc buglet / relist method Gabor Grothendieck Documentation suggestions for vignettes Brian Ripley More intensive checking of R help files Henrik Bengtsson More intensive checking of R help files Henrik Pärn help text for ave()

Wednesday, January 14, 2009 12 emails

Perry de Valpine Documentation suggestions for vignettes Alexios Ghalanos script window background and text color (PR#13446) Sklyar, Oleg (London) particulars of importing/loading libraries Simon Urbanek particulars of importing/loading libraries Pfaff, Bernhard Dr. FORTRAN compilation error on Tiger but not for Leopard Sklyar, Oleg (London) particulars of importing/loading libraries Simon Urbanek particulars of importing/loading libraries Duncan Murdoch Windows installer text bug (PR#13445) Henrik Bengtsson Windows installer text bug (PR#13445) Sklyar, Oleg (London) particulars of importing/loading libraries Samsiddhi Bhattacharjee Problem with compiling shared C/C++ library for loading into R (Linux) Pfaff, Bernhard Dr. FORTRAN compilation error on Tiger but not for Leopard

Tuesday, January 13, 2009 23 emails

Monday, January 12, 2009 7 emails

Brian Ripley x <- 1:2; dim(x) <- 2? A vector or not? Duncan Murdoch irrelevant warning message Hadley Wickham irrelevant warning message Terry Therneau irrelevant warning message Rainer Hurling Package Matrix does not compile in R-devel_2009-01-10 Henrik Bengtsson x <- 1:2; dim(x) <- 2? A vector or not? Duncan Murdoch Firefox 3 and HTML Search

Sunday, January 11, 2009 15 emails

Brian Ripley Package Matrix does not compile in R-devel_2009-01-10 Juha Vierinen complex-valued sparse matrices Rainer Hurling Package Matrix does not compile in R-devel_2009-01-10 Dirk Eddelbuettel R as a scripting engine Gabor Grothendieck R as a scripting engine Brian Ripley R as a scripting engine Nicholas Lewin-Koh NY Times article Daniel Sabanés Bové cat cannot write more than 10000 characters? [R 2.8.1] Brian Ripley cat cannot write more than 10000 characters? [R 2.8.1] Marc Schwartz code validation (was Re: NY Times article) Daniel Sabanés Bové cat cannot write more than 10000 characters? [R 2.8.1] Frank E Harrell Jr NY Times article Brian Ripley cat cannot write more than 10000 characters? [R 2.8.1] torpedo fisken Problem with compiling shared C/C++ library for loading into R (Linux) Philippe GROSJEAN code validation (was Re: NY Times article)

Saturday, January 10, 2009 4 emails

Samsiddhi Bhattacharjee Problem with compiling shared C/C++ library for loading into R (Linux) Spencer Graves code validation (was Re: NY Times article) Jake Bowers NY Times article Nicholas Lewin-Koh NY Times article

Friday, January 9, 2009 15 emails

Brian Ripley forcing the use of the c++ linker with c++ and fortran sources Steve Guerrero forcing the use of the c++ linker with c++ and fortran sources Duncan Murdoch forcing the use of the c++ linker with c++ and fortran sources Kevin R. Coombes NY Times article Nicholas Lewin-Koh NY Times article Brian Ripley (PR#13440) [R 2.8.1 on AIX 5.3] WARNING: tiffio.h: present but cannot be Steve Guerrero forcing the use of the c++ linker with c++ and fortran sources Marc Schwartz Firefox 3 and HTML Search Brian Ripley Firefox 3 and HTML Search Duncan Murdoch Firefox 3 and HTML Search Loris Bennett WARNING: tiffio.h: present but cannot be (PR#13440) Laurent Gautier Sending an interrupt signal to an embedded R Brian Ripley can't get names of R_env Brian Ripley More intensive checking of R help files torpedo fisken can't get names of R_env

Thursday, January 8, 2009 20 emails

Wednesday, January 7, 2009 12 emails

oliver Parse-Error creates strange function calls (completely different printouts) (PR#13436) Amy Mikhail Function to recognise convert dates between gregorian and other calendars (e.g. Persian)? Amy Mikhail Function to recognise convert dates between gregorian and other calendars (e.g. Persian)? Whit Armstrong Function to recognise convert dates between gregorian and other calendars (e.g. Persian)? Ted Function to recognise convert dates between gregorian and other calendars (e.g. Persian)? Charles Geyer Apparant bug in binomial model in GLM (PR#13434) Peter Dalgaard Apparant bug in binomial model in GLM (PR#13434) Amy Mikhail Function to recognise convert dates between gregorian and other calendars (e.g. Persian)? Charles Geyer Apparant bug in binomial model in GLM (PR#13434) Daniel Sabanés Bové Apparant bug in binomial model in GLM (PR#13434) Claudia Beleites ... (dotMethods) and cbind/rbind: how to give the signature? Claudia Beleites methods vs. functions

Tuesday, January 6, 2009 7 emails

Terry Therneau Strange error message Brian Ripley Strange error message Peter Dalgaard Apparant bug in binomial model in GLM (PR#13434) Brian Ripley Apparant bug in binomial model in GLM (PR#13434) Terry Therneau Strange error message Simon Urbanek MacOS X - R crashes & import problem (PR#9005) soren.faurby at biology.au.dk Apparant bug in binomial model in GLM (PR#13434)

Monday, January 5, 2009 12 emails

herwig MacOS X - R crashes & import problem (PR#9005) robin hankin \description in Rd files Brian Ripley \description in Rd files Brian Ripley bug involving quote(); ghost in the machine Daniel Sabanés Bové cat cannot write more than 10000 characters? [R 2.8.1] robin hankin \description in Rd files Brian Ripley can't get names of R_env Brian Ripley bug involving quote(); ghost in the machine torpedo fisken can't get names of R_env Felix Andrews bug involving quote(); ghost in the machine Brian Ripley cat cannot write more than 10000 characters? [R 2.8.1] Brian Ripley R-intro

Sunday, January 4, 2009 8 emails

Jan de Leeuw R-intro Brian Ripley R-intro Jan de Leeuw R-intro Brian Ripley R-intro Jan de Leeuw R-intro Ben Bolker proposed patch to Uniform.Rd Daniel Sabanés Bové cat cannot write more than 10000 characters? [R 2.8.1] Brian Ripley Bug report in foreign library (PR#13425)

Saturday, January 3, 2009 8 emails

Brian Ripley implementation of NULL in vectors Mark Rosen implementation of NULL in vectors Nicholas Horton Bug report in foreign library (PR#13425) Peter Dalgaard Bug report in foreign library (PR#13425) Nicholas Horton Bug report in foreign library (PR#13425) Brian Ripley (PR#13423) bug report: writeForeignSAS in package "foreign" Brian Ripley (PR#13424) Missing PROTECT in intern_getwd (in util.c) milbo at sonic.net Missing PROTECT in intern_getwd (in util.c) (PR#13424)

Friday, January 2, 2009 3 emails

Mark Bravington Randomly remove condition-selected rows from a matrix] Wacek Kusnierczyk Randomly remove condition-selected rows from a matrix] ken_kleinman at hms.harvard.edu bug report: writeForeignSAS in package "foreign" (PR#13423)

R-devel January 2009