R-devel - April 2011 - Date View

Saturday, April 30, 2011 7 emails

Hadley Wickham Reference Classes: Accessing methods via [[...]], bug? Alexander Favorov Bug report: R 2.14.0dev Sweave option width does not work SeshanV at mskcc.org Kendall's tau code Martin Maechler Kendall's tau code Chad Goymer Reference Classes: Accessing methods via [[...]], bug? SeshanV at mskcc.org Kendall's tau code Tim Hesterberg median and data frames

Friday, April 29, 2011 15 emails

Brian Ripley R CMD build processes inst/doc/Makefile only if there are vignette files? Dario Strbenac R CMD check and Suggests Packages Baptiste Auguie grid stringHeight Hervé Pagès R CMD build processes inst/doc/Makefile only if there are vignette files? Martin Morgan Windows Rzlib.dll gzopen and friends Patrick Burns median and data frames Hadley Wickham R CMD check and Suggests Packages Hadley Wickham median and data frames William Dunlap median and data frames Martin Morgan R CMD check and Suggests Packages Simon Urbanek R CMD check and Suggests Packages Martin Maechler median and data frames Martin Maechler request for R-exts addition Steve Lianoglou R CMD check and Suggests Packages Brian Ripley R CMD check and Suggests Packages

Thursday, April 28, 2011 12 emails

Dario Strbenac R CMD check and Suggests Packages Gabor Grothendieck error while checking package size during Rcmd check Gabor Grothendieck error while checking package size during Rcmd check Greg Snow Wish R Core had a standard format (or generic function) for "newdata" objects Gong Yu problems of new cairo device on win32 Kevin Burton MDX package? Brian Ripley GPLv2-only code in R? Duncan Murdoch GPLv2-only code in R? Ben Bolker request for R-exts addition peterhepperger at arcor.de Interrupting C++ code execution S Ellison median and data frames Andrew Runnalls Interrupting C++ code execution

Wednesday, April 27, 2011 16 emails

Paul Johnson median and data frames cstrato How to create vignette.pdf for R-2.13.0? Simon Urbanek Thread synchronization [Was: Interrupting C++ code execution] Gong Yu cairo device on win32 without gtk2 Sean Robert McGuffee Thread synchronization [Was: Interrupting C++ code execution] Peter Dalgaard median and data frames Patrick Burns median and data frames Brett Smith GPLv2-only code in R? Christophe Dutang Wish R Core had a standard format (or generic function) for "newdata" objects Paul Johnson Wish R Core had a standard format (or generic function) for "newdata" objects Gong Yu patch about recent cairo device on win32 Christophe Dutang on the Distribution task view Terry Therneau standard format for newdata objects Gabor Grothendieck Wish R Core had a standard format (or generic function) for "newdata" objects Uwe Ligges How to create vignette.pdf for R-2.13.0? Peter Dalgaard Wish R Core had a standard format (or generic function) for "newdata" objects

Tuesday, April 26, 2011 10 emails

Simon Urbanek Thread synchronization [Was: Interrupting C++ code execution] Duncan Murdoch Wish R Core had a standard format (or generic function) for "newdata" objects Baptiste Auguie grid stringHeight Sean Robert McGuffee Interrupting C++ code execution Jeff Ryan help.request() for packages? Matt Dowle help.request() for packages? cstrato How to create vignette.pdf for R-2.13.0? Paul Johnson Wish R Core had a standard format (or generic function) for "newdata" objects Simon Urbanek Interrupting C++ code execution schattenpflanze at arcor.de Interrupting C++ code execution

Monday, April 25, 2011 17 emails

Sunday, April 24, 2011 8 emails

cstrato How to create vignette.pdf for R-2.13.0? Uwe Ligges How to create vignette.pdf for R-2.13.0? cstrato How to create vignette.pdf for R-2.13.0? Uwe Ligges R 2.13.0-beta for Windows, file.copy() throws suspicious errors due to default value of copy.mode Kasper Daniel Hansen Loading a package Uwe Ligges Loading a package Uwe Ligges How to create vignette.pdf for R-2.13.0? Orin Richards Loading a package

Saturday, April 23, 2011 5 emails

cstrato How to create vignette.pdf for R-2.13.0? Yihui Xie R 2.13.0-beta for Windows, file.copy() throws suspicious errors due to default value of copy.mode Martin Maechler An update of the Distribustions man page Martin Maechler Question on 5.6 Interfacing C++ code Sean Robert McGuffee Question on 5.6 Interfacing C++ code

Friday, April 22, 2011 5 emails

Simon Urbanek using autoconf in packages [Was: Question on 5.6 Interfacing C++ code] Sean Robert McGuffee Question on 5.6 Interfacing C++ code Charlie Sharpsteen Question on 5.6 Interfacing C++ code Marc Schwartz Patch for hist.Date() function in datetime.R Sean Robert McGuffee Question on 5.6 Interfacing C++ code

Thursday, April 21, 2011 31 emails

Charlie Sharpsteen Question on 5.6 Interfacing C++ code John Chambers problem subsetting of a reference class andre zege problem subsetting of a reference class Duncan Murdoch Sweave support added to rgl package Karl-Dieter Crisman How to get R to compile with PNG support Sean Robert McGuffee Question on 5.6 Interfacing C++ code Joshua Ulrich Question on 5.6 Interfacing C++ code Sean Robert McGuffee Question on 5.6 Interfacing C++ code Sean Robert McGuffee Question on 5.6 Interfacing C++ code Simon Urbanek How to get R to compile with PNG support Duncan Murdoch Question on 5.6 Interfacing C++ code Simon Urbanek Question on 5.6 Interfacing C++ code Sean Robert McGuffee Question on 5.6 Interfacing C++ code Simon Urbanek How to get R to compile with PNG support Dirk Eddelbuettel How to get R to compile with PNG support Karl-Dieter Crisman How to get R to compile with PNG support Gabor Grothendieck R CMD Sweave versus Sweave() on Windows Matt Shotwell How to get R to compile with PNG support Pfaff, Bernhard Dr. R CMD Sweave versus Sweave() on Windows Dirk Eddelbuettel BOOST libraries Brian Ripley R CMD Sweave versus Sweave() on Windows Dirk Eddelbuettel Question on 5.6 Interfacing C++ code Dirk Eddelbuettel How to get R to compile with PNG support Kasper Daniel Hansen R CMD Sweave versus Sweave() on Windows Duncan Murdoch Question on 5.6 Interfacing C++ code Pfaff, Bernhard Dr. R CMD Sweave versus Sweave() on Windows Uwe Ligges useDynLib in older versions e.g. (2.10) Tobias Abenius useDynLib in older versions e.g. (2.10) Uwe Ligges useDynLib in older versions e.g. (2.10) Tal Galili Patching "update.packages" to enable updating of only a user defined subset of packages Brian Ripley Window binary packages built for R 2.13.0 do not work in 2.10.0 (was useDynLib in older versions e.g. (2.10))

Wednesday, April 20, 2011 22 emails

Duncan Murdoch Sweave support added to rgl package Dominick Samperi Sweave support added to rgl package Peter Dalgaard possible minor bug in fisher.test Fay, Michael (NIH/NIAID) [E] possible minor bug in fisher.test Martin Morgan Make as.factor an S3 generic? Brian Ripley Make as.factor an S3 generic? Martin Morgan Make as.factor an S3 generic? Duncan Murdoch Sweave support added to rgl package Duncan Murdoch Sweave support added to rgl package Dominick Samperi Sweave support added to rgl package Charlie Sharpsteen Patching "update.packages" to enable updating of only a user defined subset of packages Charlie Sharpsteen Sweave support added to rgl package William Dunlap Make as.factor an S3 generic? Martin Morgan Make as.factor an S3 generic? John Chambers self-referential representations in S4 Karl-Dieter Crisman How to get R to compile with PNG support Sean Robert McGuffee Question on 5.6 Interfacing C++ code David Epstein Sweave tokens not in column 1: enhancement request Karl-Dieter Crisman How to get R to compile with PNG support Tobias Abenius useDynLib in older versions e.g. (2.10) Friedrich Leisch Sweave tokens not in column 1: enhancement request Charlie Sharpsteen How to get R to compile with PNG support

Tuesday, April 19, 2011 13 emails

Dario Strbenac Package Name Not Found Warning Martin Morgan Package Name Not Found Warning Dario Strbenac Package Name Not Found Warning Martin Morgan Package Name Not Found Warning Dario Strbenac Package Name Not Found Warning James Bullard self-referential representations in S4 David Epstein Sweave tokens not in column 1: enhancement request Duncan Murdoch Sweave support added to rgl package Christophe Dutang An update of the Distribustions man page Terry Therneau R-devel Digest, Vol 98, Issue 19 Robert Lowe Dangerous Bug with IF function of R Martin Maechler Dangerous Bug with IF function of R Peter Dalgaard help with eval()

Monday, April 18, 2011 17 emails

Brian Ripley help with eval() Gabor Grothendieck help with eval() Duncan Murdoch help with eval() Terry Therneau help with eval() Luke Tierney Tail Call Elimination? Greg Snow Use keep.source for function in package with lazy loading Brian Ripley Statonnector fails (was Re: R fails on Windows 2008 Server) salmajj Dangerous Bug with IF function of R Petr Savicky Dangerous Bug with IF function of R Shawna JOB R fails on Windows 2008 Server Brian Diggs Dangerous Bug with IF function of R salmajj Dangerous Bug with IF function of R Karl-Dieter Crisman How to get R to compile with PNG support Dominick Samperi Tail Call Elimination? Luke Tierney Tail Call Elimination? Allan Engelhardt sessionInfo() and byte compiler Brian Ripley R script in batch mode

Sunday, April 17, 2011 5 emails

Tal Galili Patching "update.packages" to enable updating of only a user defined subset of packages Thomas Lumley DESCRIPTION file and Rd examples jusce R script in batch mode Dario Strbenac DESCRIPTION file and Rd examples Dominick Samperi Tail Call Elimination?

Saturday, April 16, 2011 1 email

Mohit Dayal Tail Call Elimination?

Friday, April 15, 2011 6 emails

Martin Morgan DESCRIPTION file and Rd examples Simon Urbanek DESCRIPTION file and Rd examples Uwe Ligges DESCRIPTION file and Rd examples Terry Therneau predict() Terry Therneau predict() Peter Dalgaard predict()

Thursday, April 14, 2011 5 emails

Dario Strbenac DESCRIPTION file and Rd examples Simon Urbanek Possible bug in 'relist()' and/or 'as.relistable()' Janko Thyson Possible bug in 'relist()' and/or 'as.relistable()' Stephen Milborrow Postscript can be very slow in R 2.13-0 James Perkins S4 plus <tab>

Wednesday, April 13, 2011 17 emails

Tuesday, April 12, 2011 17 emails

Hervé Pagès R CMD build --resave-data Simon Urbanek R CMD build --resave-data Hadley Wickham R CMD build --resave-data Simon Urbanek R CMD build --resave-data Hervé Pagès R CMD build --resave-data Henrik Bengtsson Signal handling / alarm timeouts Murray Stokely Signal handling / alarm timeouts Peter Dalgaard parse_Rd raises error when example section contains a quoted percent character Jeffrey Horner parse_Rd raises error when example section contains a quoted percent character Jeffrey Horner parse_Rd raises error when example section contains a quoted percent character Peter Dalgaard proposal for adapting code of function gl() William Dunlap all.equal(data.frame(package_version()), ...) infinite recursion Duncan Murdoch Text differencing code in R? Geoff Jentry Conditional "Suggests" Petr Savicky duplicates() function Friedrich Leisch Conditional "Suggests" Joris Meys proposal for adapting code of function gl()

Monday, April 11, 2011 24 emails

Peter Dalgaard proposal for adapting code of function gl() Joris Meys proposal for adapting code of function gl() Geoff Jentry Conditional "Suggests" Hadley Wickham Conditional "Suggests" Duncan Murdoch Wish there were a "strict mode" for R interpreter. What Roebuck,Paul L Wish there were a "strict mode" for R interpreter. What Spencer Graves Wish there were a "strict mode" for R interpreter. What Geoff Jentry Conditional "Suggests" Duncan Murdoch sort.int(S3object) strips class but not the is.object flag Duncan Murdoch duplicates() function Duncan Murdoch sort.int(S3object) strips class but not the is.object flag William Dunlap sort.int(S3object) strips class but not the is.object flag William Dunlap sort.int(S3object) strips class but not the is.object flag Spencer Graves Wish there were a "strict mode" for R interpreter. What Simon Urbanek Wish there were a "strict mode" for R interpreter. What Davor Cubranic Wish there were a "strict mode" for R interpreter. What Uwe Ligges duplicates() function Uwe Ligges R CMD build --resave-data Gavin Simpson Inconsistency between rowMeans documentation and reality? Brian Ripley Inconsistency between rowMeans documentation and reality? Ben Bolker pd Peter Dalgaard open.exe Virus W32.ATRAPS Martin Maechler R CMD build now removes empty dirs Barry Rowlingson Wish there were a "strict mode" for R interpreter. What

Sunday, April 10, 2011 16 emails

Hervé Pagès R CMD build --resave-data Hervé Pagès R CMD build now removes empty dirs Hervé Pagès question about assignment warnings for replacement methods Duncan Murdoch deparse operators in expressions Peter Dalgaard Wish there were a "strict mode" for R interpreter. What about You? Yihui Xie deparse operators in expressions Luke Tierney Wish there were a "strict mode" for R interpreter. What about You? Hadley Wickham Wish there were a "strict mode" for R interpreter. What about You? Peter Dalgaard Wish there were a "strict mode" for R interpreter. What about You? Spencer Graves Wish there were a "strict mode" for R interpreter. What about You? Gabor Grothendieck Rtools questions Duncan Murdoch deparse operators in expressions Duncan Murdoch Wish there were a "strict mode" for R interpreter. What about You? Brian Ripley Use keep.source for function in package with lazy loading 供应商管理采购流程优化及供应商评估与管理 Costas Vorlow open.exe Virus W32.ATRAPS

Saturday, April 9, 2011 14 emails

Friday, April 8, 2011 24 emails

Brian Ripley Compression of largish expression array files in the DAAGbio/inst/doc directory? John Maindonald Compression of largish expression array files in the DAAGbio/inst/doc directory? Brad Patrick Schneid duplicates() function Hin-Tak Leung core Matrix package segfaulted on R CMD check --use-gct Martin Maechler core Matrix package segfaulted on R CMD check --use-gct Michael Friendly Consistency of messages from R CMD {check,build,install} Simon Urbanek question about assignment warnings for replacement methods Hervé Pagès question about assignment warnings for replacement methods Luke Tierney core Matrix package segfaulted on R CMD check --use-gct Luke Tierney core Matrix package segfaulted on R CMD check --use-gct William Dunlap duplicates() function Brian Ripley Invalid connection after closing? Joshua Ulrich duplicates() function andre zege How to debug reference classes? Kasper Daniel Hansen duplicates() function Duncan Murdoch duplicates() function Joris Meys Invalid connection after closing? Hadley Wickham duplicates() function Duncan Murdoch Invalid connection after closing? Joshua Ulrich duplicates() function Duncan Murdoch duplicates() function Joris Meys Invalid connection after closing? Brian Ripley core Matrix package segfaulted on R CMD check --use-gct Andreas Borg super basic questions about S4 classes

Thursday, April 7, 2011 18 emails

Wednesday, April 6, 2011 11 emails

Hin-Tak Leung core Matrix package segfaulted on R CMD check --use-gct Dario Strbenac R CMD check for 2.13 rc Gabriel Becker Activating a Regular Binding andre zege S4 generic functions/methods vs enclosures Henrik Bengtsson Rtools questions John Chambers S4 generic functions/methods vs enclosures Duncan Murdoch Rtools questions andre zege S4 generic functions/methods vs enclosures Gabor Grothendieck Rtools questions Duncan Murdoch Rtools questions Rob Hyndman Proposed modification to decompose() and plot.decomposed.ts()

Tuesday, April 5, 2011 26 emails

Dirk Eddelbuettel Rcheck Directory Dario Strbenac Rcheck Directory Spencer Graves Rtools questions Gabor Grothendieck Rtools questions Spencer Graves Rtools questions Spencer Graves Rtools questions Henrik Bengtsson R CMD check for 2.13 rc Gabor Grothendieck Rtools questions Dario Strbenac R CMD check for 2.13 rc Henrik Bengtsson Rtools questions Duncan Murdoch Rtools questions Simon Urbanek Rtools questions Göran Broström Names of a data set in a package Spencer Graves Rtools questions Spencer Graves Rtools questions Marc Carlson question about assignment warnings for replacement methods Gabor Grothendieck Names of a data set in a package Göran Broström Names of a data set in a package Duncan Murdoch question about assignment warnings for replacement methods Marc Carlson question about assignment warnings for replacement methods andre zege super basic questions about S4 classes Greg Snow Use keep.source for function in package with lazy loading Gabor Grothendieck Names of a data set in a package Göran Broström Names of a data set in a package Hadley Wickham Bug in as.data.frame.POSIXct? Gavin Simpson Inconsistency between rowMeans documentation and reality?

Monday, April 4, 2011 7 emails

Brian Ripley Use keep.source for function in package with lazy loading Greg Snow Use keep.source for function in package with lazy loading William Dunlap [[.data.frame oddity Gabor Grothendieck Rtools and MinGW Duncan Murdoch Rtools and MinGW Thomas Mang Rtools and MinGW Brian Ripley Rtools and MinGW

Sunday, April 3, 2011 6 emails

ronggui Documentation for the glm module in jags/rjags? Henrik Bengtsson Inconsistency: sort(NULL)/sort.int(NULL) does not throw an error, cf. order(NULL), sort.int(NULL, index.return=TRUE), ... Thomas Mang Rtools and MinGW Jay Emerson Suggests and examples Uwe Ligges Suggests and examples Jay Emerson Suggests and examples

Saturday, April 2, 2011 2 emails

Henrik Bengtsson reg.finalizer(): Multiple finalizers? Tal Galili Adding a "description" meta-tag to the R homepage

Friday, April 1, 2011 15 emails

Davor Cubranic Phrase "package writer" in R-exts Simon Urbanek logos Claudia Beleites logos Kevin Wright Phrase "package writer" in R-exts Hin-Tak Leung "R CMD check" accepts but "R CMD INSTALL" rejects a tar ball. Hadley Wickham Adding a "description" meta-tag to the R homepage Roebuck,Paul L Adding a "description" meta-tag to the R homepage Ted Phrase "package writer" in R-exts Peter Dalgaard Adding a "description" meta-tag to the R homepage Davor Cubranic Phrase "package writer" in R-exts Simon Urbanek "R CMD check" accepts but "R CMD INSTALL" rejects a tar ball. Hin-Tak Leung "R CMD check" accepts but "R CMD INSTALL" rejects a tar ball. Simon Urbanek "R CMD check" accepts but "R CMD INSTALL" rejects a tar ball. Hin-Tak Leung core Matrix package segfaulted on R CMD check --use-gct Hin-Tak Leung "R CMD check" accepts but "R CMD INSTALL" rejects a tar ball.

Thursday, March 31, 2011 2 emails

Tal Galili Adding a "description" meta-tag to the R homepage Ei-ji Nakama SurviveGotoBLAS2 for Win64 (RC release)

R-devel April 2011