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R-devel February 2012

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Alternative to .Internal(.dfltStop(msg, call))?

1 msg
Henrik Bengtsson Alternative to .Internal(.dfltStop(msg, call))? Feb 29, 2012

Can I use "..." in parallel:::clusterApplyLB?

2 msgs
Slava Razbash Can I use "..." in parallel:::clusterApplyLB? Feb 12, 2012 Brian Ripley Can I use "..." in parallel:::clusterApplyLB? Feb 13, 2012

Canonical package directory name for JAR files?

9 msgs
Roebuck,Paul L Canonical package directory name for JAR files? Feb 7, 2012 Simon Urbanek Canonical package directory name for JAR files? Feb 7, 2012 Kevin Coombes Canonical package directory name for JAR files? Feb 8, 2012 Roebuck,Paul L Canonical package directory name for JAR files? Feb 8, 2012 William Dunlap Canonical package directory name for JAR files? Feb 8, 2012 Simon Urbanek Canonical package directory name for JAR files? Feb 8, 2012 William Dunlap Canonical package directory name for JAR files? Feb 8, 2012 Roebuck,Paul L Canonical package directory name for JAR files? Feb 8, 2012 Simon Urbanek Canonical package directory name for JAR files? Feb 8, 2012

Comments on R_exts section 1.6.6, Namespaces with S4 classes and methods

1 msg
Martin Morgan Comments on R_exts section 1.6.6, Namespaces with S4 classes and methods Feb 26, 2012

Conflict from saved implicit generics in methods package for rcond, norm, backsolve

1 msg
Patrick Aboyoun Conflict from saved implicit generics in methods package for rcond, norm, backsolve Feb 27, 2012

Controlling simplification in apply()?

2 msgs
Gavin Simpson Controlling simplification in apply()? Feb 20, 2012 Brian Ripley Controlling simplification in apply()? Feb 20, 2012

Crash in R using embedded.

4 msgs
Dave Pugmire Crash in R using embedded. Feb 1, 2012 Duncan Murdoch Crash in R using embedded. Feb 1, 2012 oliver Crash in R using embedded. Feb 1, 2012 Dirk Eddelbuettel Crash in R using embedded. Feb 1, 2012

Creating XML document extremely slow

7 msgs
Titus von der Malsburg Creating XML document extremely slow Feb 10, 2012 Friedrich Leisch Creating XML document extremely slow Feb 10, 2012 Titus von der Malsburg Creating XML document extremely slow Feb 10, 2012 Milan Bouchet-Valat Creating XML document extremely slow Feb 10, 2012 Titus von der Malsburg Creating XML document extremely slow Feb 10, 2012 Milan Bouchet-Valat Creating XML document extremely slow Feb 10, 2012 Titus von der Malsburg Creating XML document extremely slow Feb 10, 2012

Error in data.frame(srcfile = NA_character_ ...) using R CMD check

1 msg
Joris Meys Error in data.frame(srcfile = NA_character_ ...) using R CMD check Feb 8, 2012

FORTRAN compilation error

6 msgs
David L Lorenz FORTRAN compilation error Feb 8, 2012 Simon Urbanek FORTRAN compilation error Feb 8, 2012 David L Lorenz FORTRAN compilation error Feb 9, 2012 Simon Urbanek FORTRAN compilation error Feb 9, 2012 David L Lorenz FORTRAN compilation error Feb 9, 2012 Simon Urbanek FORTRAN compilation error Feb 9, 2012

Fetching email in R (IMAP)

1 msg
Stavros Macrakis Fetching email in R (IMAP) Feb 28, 2012

Identical copy of base function

5 msgs
Matt Dowle Identical copy of base function Feb 27, 2012 Martin Maechler Identical copy of base function Feb 27, 2012 Jeff Ryan Identical copy of base function Feb 27, 2012 Martin Maechler Identical copy of base function Feb 27, 2012 Jeff Ryan Identical copy of base function Feb 27, 2012

Is the link to the R wiki down?

3 msgs
Tal Galili Is the link to the R wiki down? Feb 3, 2012 Philippe GROSJEAN Is the link to the R wiki down? Feb 3, 2012 Simon Urbanek Is the link to the R wiki down? Feb 3, 2012

Jazzing up the Task Views index page

11 msgs
Barry Rowlingson Jazzing up the Task Views index page Feb 21, 2012 Berend Hasselman Jazzing up the Task Views index page Feb 21, 2012 Ben Bolker Jazzing up the Task Views index page Feb 21, 2012 Achim Zeileis Jazzing up the Task Views index page Feb 21, 2012 Hadley Wickham Jazzing up the Task Views index page Feb 21, 2012 Hadley Wickham Jazzing up the Task Views index page Feb 21, 2012 Yihui Xie Jazzing up the Task Views index page Feb 21, 2012 Yihui Xie Jazzing up the Task Views index page Feb 21, 2012 Brett Presnell Jazzing up the Task Views index page Feb 22, 2012 Joshua Wiley Jazzing up the Task Views index page Feb 22, 2012 Barry Rowlingson Jazzing up the Task Views index page Feb 27, 2012

Loading externally created LIBSVM model into R.

1 msg
yindalon Loading externally created LIBSVM model into R. Feb 21, 2012

OpenMP and random number generation

4 msgs
Mathieu Ribatet OpenMP and random number generation Feb 22, 2012 Brian Ripley OpenMP and random number generation Feb 22, 2012 Karl Forner OpenMP and random number generation Feb 22, 2012 Petr Savicky OpenMP and random number generation Feb 22, 2012

Options for keeping files when package re-install or update.

2 msgs
전희원 Options for keeping files when package re-install or update. Feb 7, 2012 Uwe Ligges Options for keeping files when package re-install or update. Feb 8, 2012

Out of date instructions to build R using MKL

1 msg
Milan Bouchet-Valat Out of date instructions to build R using MKL Feb 10, 2012

Overwrite S3 methond from base package

3 msgs
Thaler,Thorn,LAUSANNE,Applied Mathematics Overwrite S3 methond from base package Feb 13, 2012 Patrick Burns Overwrite S3 methond from base package Feb 13, 2012 Thaler,Thorn,LAUSANNE,Applied Mathematics Overwrite S3 methond from base package Feb 13, 2012

Parallel R CMD check?

4 msgs
Martin Morgan Parallel R CMD check? Feb 16, 2012 Brian Ripley Parallel R CMD check? Feb 17, 2012 Martin Morgan Parallel R CMD check? Feb 17, 2012 Paul Gilbert Parallel R CMD check? Feb 17, 2012

Private Variables in R5-Classes possible?

1 msg
Claus Jonathan Fritzemeier Private Variables in R5-Classes possible? Feb 21, 2012

Private fields in reference classes (was: Private Variables in R5-Classes possible?)

1 msg
John Chambers Private fields in reference classes (was: Private Variables in R5-Classes possible?) Feb 22, 2012

R CMD SHLIB in Windows XP - No output at all

8 msgs
Lorenzo R CMD SHLIB in Windows XP - No output at all Feb 13, 2012 Dirk Eddelbuettel R CMD SHLIB in Windows XP - No output at all Feb 15, 2012 Duncan Murdoch R CMD SHLIB in Windows XP - No output at all Feb 15, 2012 Lorenzo R CMD SHLIB in Windows XP - No output at all Feb 15, 2012 Lorenzo R CMD SHLIB in Windows XP - No output at all Feb 15, 2012 William Dunlap R CMD SHLIB in Windows XP - No output at all Feb 15, 2012 William Dunlap R CMD SHLIB in Windows XP - No output at all Feb 15, 2012 Lorenzo R CMD SHLIB in Windows XP - No output at all Feb 15, 2012

R devel [and R 2.14.1 patched]: R CMD build now sources ~/.Rprofile

2 msgs
Henrik Bengtsson R devel [and R 2.14.1 patched]: R CMD build now sources ~/.Rprofile Feb 23, 2012 Henrik Bengtsson R devel [and R 2.14.1 patched]: R CMD build now sources ~/.Rprofile Feb 23, 2012

R devel: R CMD build now sources ~/.Rprofile

1 msg
Henrik Bengtsson R devel: R CMD build now sources ~/.Rprofile Feb 8, 2012

RFC: Proposal to make NROW() and NCOL() slightly more general

5 msgs
Martin Maechler RFC: Proposal to make NROW() and NCOL() slightly more general Feb 4, 2012 Hadley Wickham RFC: Proposal to make NROW() and NCOL() slightly more general Feb 4, 2012 Martin Maechler RFC: Proposal to make NROW() and NCOL() slightly more general Feb 6, 2012 Martin Maechler RFC: Proposal to make NROW() and NCOL() slightly more general Feb 7, 2012 Hervé Pagès RFC: Proposal to make NROW() and NCOL() slightly more general Feb 8, 2012

RcppProgress: progress monitoring and interrupting c++ code, request for comments

1 msg
Karl Forner RcppProgress: progress monitoring and interrupting c++ code, request for comments Feb 23, 2012

Reading a Fixed-Width File with SAS import instructions directly into an R data frame

1 msg
Anthony Damico Reading a Fixed-Width File with SAS import instructions directly into an R data frame Feb 4, 2012

Replace back slashes with forward slashes?

5 msgs
Spencer Graves Replace back slashes with forward slashes? Feb 29, 2012 Simon Urbanek Replace back slashes with forward slashes? Feb 29, 2012 Spencer Graves Replace back slashes with forward slashes? Feb 29, 2012 Uwe Ligges Replace back slashes with forward slashes? Feb 29, 2012 Simon Urbanek Replace back slashes with forward slashes? Feb 29, 2012

Resume processing after warning handler.

4 msgs
Titus von der Malsburg Resume processing after warning handler. Feb 3, 2012 Martin Morgan Resume processing after warning handler. Feb 4, 2012 Titus von der Malsburg Resume processing after warning handler. Feb 6, 2012 Martin Morgan Resume processing after warning handler. Feb 6, 2012

Segfault on ".C" registration via R_CMethodDef according to 'Writing R Extensions'.

3 msgs
Daniel Adler Segfault on ".C" registration via R_CMethodDef according to 'Writing R Extensions'. Feb 6, 2012 Simon Urbanek Segfault on ".C" registration via R_CMethodDef according to 'Writing R Extensions'. Feb 6, 2012 Daniel Adler Segfault on ".C" registration via R_CMethodDef according to 'Writing R Extensions'. Feb 6, 2012

Silently loading and Depends: versus NAMESPACE imports

15 msgs
Suraj Gupta Silently loading and Depends: versus NAMESPACE imports Feb 22, 2012 Uwe Ligges Silently loading and Depends: versus NAMESPACE imports Feb 23, 2012 Suraj Gupta Silently loading and Depends: versus NAMESPACE imports Feb 23, 2012 Hervé Pagès Silently loading and Depends: versus NAMESPACE imports Feb 23, 2012 Uwe Ligges Silently loading and Depends: versus NAMESPACE imports Feb 24, 2012 Dirk Eddelbuettel Silently loading and Depends: versus NAMESPACE imports Feb 24, 2012 Suraj Gupta Silently loading and Depends: versus NAMESPACE imports Feb 24, 2012 Uwe Ligges Silently loading and Depends: versus NAMESPACE imports Feb 24, 2012 Suraj Gupta Silently loading and Depends: versus NAMESPACE imports Feb 24, 2012 Suraj Gupta Silently loading and Depends: versus NAMESPACE imports Feb 24, 2012 Uwe Ligges Silently loading and Depends: versus NAMESPACE imports Feb 24, 2012 Suraj Gupta Silently loading and Depends: versus NAMESPACE imports Feb 24, 2012 Uwe Ligges Silently loading and Depends: versus NAMESPACE imports Feb 24, 2012 Uwe Ligges Silently loading and Depends: versus NAMESPACE imports Feb 24, 2012 Suraj Gupta Silently loading and Depends: versus NAMESPACE imports Feb 24, 2012

Task views

5 msgs
Uwe Ligges Task views Feb 11, 2012 Paul Gilbert Task views Feb 11, 2012 Duncan Murdoch Task views Feb 12, 2012 Patrick Burns Task views Feb 13, 2012 Ravi Varadhan Task views Feb 14, 2012

Task views (was: Re: [R] Schwefel Function Optimization)

2 msgs
Patrick Burns Task views (was: Re: [R] Schwefel Function Optimization) Feb 11, 2012 Barry Rowlingson Task views (was: Re: [R] Schwefel Function Optimization) Feb 12, 2012

Typo in NEWS: -as-cran should be --as-cran

3 msgs
Henrik Bengtsson Typo in NEWS: -as-cran should be --as-cran Feb 28, 2012 Peter Dalgaard Typo in NEWS: -as-cran should be --as-cran Feb 29, 2012 Henrik Bengtsson Typo in NEWS: -as-cran should be --as-cran Feb 29, 2012

Unexpected behavior in factor level ordering

2 msgs
Paul Johnson Unexpected behavior in factor level ordering Feb 25, 2012 Uwe Ligges Unexpected behavior in factor level ordering Feb 25, 2012

Unexpected behaviour for RowSideColors in function heatmap

1 msg
Pär Engström Unexpected behaviour for RowSideColors in function heatmap Feb 28, 2012

Unstable reproduce for potential issue with CHARSXP creation

2 msgs
Patrick Aboyoun Unstable reproduce for potential issue with CHARSXP creation Feb 16, 2012 Patrick Aboyoun Unstable reproduce for potential issue with CHARSXP creation Feb 19, 2012

Using custom R_LIBS with R CMD install

10 msgs
Hadley Wickham Using custom R_LIBS with R CMD install Feb 7, 2012 Uwe Ligges Using custom R_LIBS with R CMD install Feb 8, 2012 Hadley Wickham Using custom R_LIBS with R CMD install Feb 8, 2012 Dirk Eddelbuettel Using custom R_LIBS with R CMD install Feb 8, 2012 Uwe Ligges Using custom R_LIBS with R CMD install Feb 8, 2012 Dirk Eddelbuettel Using custom R_LIBS with R CMD install Feb 8, 2012 Hadley Wickham Using custom R_LIBS with R CMD install Feb 8, 2012 Hadley Wickham Using custom R_LIBS with R CMD install Feb 8, 2012 Uwe Ligges Using custom R_LIBS with R CMD install Feb 9, 2012 Hadley Wickham Using custom R_LIBS with R CMD install Feb 9, 2012

Version control (git, mercurial) for R packages

3 msgs
Rainer M Krug Version control (git, mercurial) for R packages Feb 10, 2012 Davor Cubranic Version control (git, mercurial) for R packages Feb 10, 2012 Rainer M Krug Version control (git, mercurial) for R packages Feb 13, 2012

Why cant my S4 class have a slot named `C`?

3 msgs
Steve Lianoglou Why cant my S4 class have a slot named `C`? Feb 21, 2012 Martin Morgan Why cant my S4 class have a slot named `C`? Feb 21, 2012 Steve Lianoglou Why cant my S4 class have a slot named `C`? Feb 21, 2012

building r-devel

2 msgs
Ben Bolker building r-devel Feb 17, 2012 Dirk Eddelbuettel building r-devel Feb 17, 2012

capture.output() is trying to allocate 17179869182.6 Gb on my not so big data.frame

4 msgs
Hervé Pagès capture.output() is trying to allocate 17179869182.6 Gb on my not so big data.frame Feb 7, 2012 Martin Morgan capture.output() is trying to allocate 17179869182.6 Gb on my not so big data.frame Feb 7, 2012 Martin Maechler capture.output() is trying to allocate 17179869182.6 Gb on my not so big data.frame Feb 8, 2012 Hervé Pagès capture.output() is trying to allocate 17179869182.6 Gb on my not so big data.frame Feb 8, 2012

executable files R package

8 msgs
sahir bhatnagar executable files R package Feb 13, 2012 Duncan Murdoch executable files R package Feb 15, 2012 sahir bhatnagar executable files R package Feb 17, 2012 William Dunlap executable files R package Feb 17, 2012 sahir bhatnagar executable files R package Feb 20, 2012 Brian Ripley executable files R package Feb 20, 2012 sahir bhatnagar executable files R package Feb 20, 2012 Brian Ripley executable files R package Feb 20, 2012

function remains loaded in the search space after detaching the package

1 msg
Martin Maechler function remains loaded in the search space after detaching the package Feb 24, 2012

function remains loaded in the search space after detaching the package

9 msgs
Joris Meys function remains loaded in the search space after detaching the package Feb 24, 2012 Joris Meys function remains loaded in the search space after detaching the package Feb 24, 2012 Brian Ripley function remains loaded in the search space after detaching the package Feb 24, 2012 Joris Meys function remains loaded in the search space after detaching the package Feb 24, 2012 Brian Ripley function remains loaded in the search space after detaching the package Feb 24, 2012 Joris Meys function remains loaded in the search space after detaching the package Feb 24, 2012 Brian Ripley function remains loaded in the search space after detaching the package Feb 24, 2012 Joris Meys function remains loaded in the search space after detaching the package Feb 24, 2012 Uwe Ligges function remains loaded in the search space after detaching the package Feb 24, 2012

help.search() in html?

4 msgs
Hiroyuki Kawakatsu help.search() in html? Feb 15, 2012 Duncan Murdoch help.search() in html? Feb 15, 2012 Duncan Murdoch help.search() in html? Feb 15, 2012 Hiroyuki Kawakatsu help.search() in html? Feb 15, 2012

how to convert JGR package script to .exe

1 msg
sagarnikam123 how to convert JGR package script to .exe Feb 10, 2012

ignorant question about Roxy- mode in ESS

1 msg
Ben Bolker ignorant question about Roxy- mode in ESS Jan 31, 2012

improved error message when existing implicit S4 generic is not imported?

2 msgs
Martin Morgan improved error message when existing implicit S4 generic is not imported? Feb 25, 2012 Brian Ripley improved error message when existing implicit S4 generic is not imported? Feb 27, 2012

include <R.h>

7 msgs
Paul Gilbert include <R.h> Feb 19, 2012 Dirk Eddelbuettel include <R.h> Feb 19, 2012 Paul Gilbert include <R.h> Feb 19, 2012 Dirk Eddelbuettel include <R.h> Feb 19, 2012 Simon Urbanek include <R.h> Feb 19, 2012 Paul Gilbert include <R.h> Feb 19, 2012 Simon Urbanek include <R.h> Feb 19, 2012

inconsistency with names on call object

1 msg
William Dunlap inconsistency with names on call object Feb 2, 2012

inconsolata font for building vignettes with R-devel

2 msgs
Trevor Davis inconsolata font for building vignettes with R-devel Feb 10, 2012 Dirk Eddelbuettel inconsolata font for building vignettes with R-devel Feb 11, 2012

location of check.Renviron on Windows

6 msgs
Robert M. Flight location of check.Renviron on Windows Feb 1, 2012 Uwe Ligges location of check.Renviron on Windows Feb 1, 2012 Dirk Eddelbuettel location of check.Renviron on Windows Feb 1, 2012 Simon Urbanek location of check.Renviron on Windows Feb 1, 2012 Robert M. Flight location of check.Renviron on Windows Feb 1, 2012 Brian Ripley location of check.Renviron on Windows Feb 1, 2012

mem.limits deprecated

3 msgs
Jeroen Ooms mem.limits deprecated Feb 6, 2012 Dirk Eddelbuettel mem.limits deprecated Feb 6, 2012 Martin Morgan mem.limits deprecated Feb 6, 2012

method using several (and different) arguments in turn

3 msgs
James Foadi method using several (and different) arguments in turn Feb 14, 2012 Martin Morgan method using several (and different) arguments in turn Feb 14, 2012 James Foadi method using several (and different) arguments in turn Feb 14, 2012

missing value break my if clause and crash my program

1 msg
zisheng xing missing value break my if clause and crash my program Feb 29, 2012

na.omit option in prcomp: formula interface only

1 msg
Ben Bolker na.omit option in prcomp: formula interface only Feb 9, 2012

panel.first for bxp

3 msgs
Manuel López-Ibáñez panel.first for bxp Feb 5, 2012 Brian Ripley panel.first for bxp Feb 6, 2012 Manuel López-Ibáñez panel.first for bxp Feb 6, 2012

portable parallel seeds project: request for critiques

11 msgs
Paul Johnson portable parallel seeds project: request for critiques Feb 17, 2012 Paul Gilbert portable parallel seeds project: request for critiques Feb 17, 2012 Paul Johnson portable parallel seeds project: request for critiques Feb 17, 2012 Paul Gilbert portable parallel seeds project: request for critiques Feb 17, 2012 Petr Savicky portable parallel seeds project: request for critiques Feb 17, 2012 Paul Johnson portable parallel seeds project: request for critiques Feb 17, 2012 Petr Savicky portable parallel seeds project: request for critiques Feb 18, 2012 Thomas Lumley portable parallel seeds project: request for critiques Feb 19, 2012 Petr Savicky portable parallel seeds project: request for critiques Feb 21, 2012 Paul Johnson portable parallel seeds project: request for critiques Feb 22, 2012 Petr Savicky portable parallel seeds project: request for critiques Feb 22, 2012

prior.weights and weights()

2 msgs
Ben Bolker prior.weights and weights() Feb 21, 2012 Ben Bolker prior.weights and weights() Feb 27, 2012

read.spss issues

3 msgs
Jeroen Ooms read.spss issues Feb 14, 2012 Thomas Lumley read.spss issues Feb 15, 2012 David Winsemius read.spss issues Feb 15, 2012

requesting a new SIG mailing list

14 msgs
Mauricio Zambrano-Bigiarini requesting a new SIG mailing list Feb 13, 2012 Rainer M Krug requesting a new SIG mailing list Feb 14, 2012 Mauricio Zambrano-Bigiarini requesting a new SIG mailing list Feb 14, 2012 Brian Ripley requesting a new SIG mailing list Feb 14, 2012 Mauricio Zambrano-Bigiarini requesting a new SIG mailing list Feb 14, 2012 Sarah Goslee requesting a new SIG mailing list Feb 14, 2012 David L Lorenz requesting a new SIG mailing list Feb 14, 2012 Dominik Reusser requesting a new SIG mailing list Feb 15, 2012 Mauricio Zambrano-Bigiarini requesting a new SIG mailing list Feb 15, 2012 Sarah Goslee requesting a new SIG mailing list Feb 15, 2012 Martin Maechler requesting a new SIG mailing list Feb 16, 2012 Sarah Goslee requesting a new SIG mailing list Feb 16, 2012 Mauricio Zambrano-Bigiarini requesting a new SIG mailing list Feb 16, 2012 Gavin Simpson requesting a new SIG mailing list Feb 16, 2012

scan() doesn't like '1.#IND'

3 msgs
Hervé Pagès scan() doesn't like '1.#IND' Feb 8, 2012 Duncan Murdoch scan() doesn't like '1.#IND' Feb 8, 2012 Dan Tenenbaum scan() doesn't like '1.#IND' Feb 8, 2012

semi-transparency not supported in devel R? "alpha" cannot be specified in qplot()

1 msg
Tengfei Yin semi-transparency not supported in devel R? "alpha" cannot be specified in qplot() Feb 19, 2012

tempdir() documentation or real bug ?

2 msgs
Brian G. Peterson tempdir() documentation or real bug ? Feb 21, 2012 Simon Urbanek tempdir() documentation or real bug ? Feb 21, 2012

text(1:10, col=NA) is not transparent

1 msg
Peter Ruckdeschel text(1:10, col=NA) is not transparent Feb 20, 2012

text(1:10, col=NA) is not transparent

1 msg
Kasper Daniel Hansen text(1:10, col=NA) is not transparent Feb 20, 2012

text(1:10, col=NA) is printed in color 1 instead of color 0 (was "is not transparent")

2 msgs
Peter Ruckdeschel text(1:10, col=NA) is printed in color 1 instead of color 0 (was "is not transparent") Feb 20, 2012 Brian Ripley text(1:10, col=NA) is printed in color 1 instead of color 0 (was "is not transparent") Feb 20, 2012

which R package is used for browsing web pages through coding

2 msgs
sagarnikam123 which R package is used for browsing web pages through coding Feb 10, 2012 Jeff Ryan which R package is used for browsing web pages through coding Feb 15, 2012