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R-devel October 2012

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--enable-R-shlib and external BLAS/LAPACK libraries

1 msg
Bjørn-Helge Mevik --enable-R-shlib and external BLAS/LAPACK libraries Oct 19, 2012

12-bit functionality in tiff package

3 msgs
Joseph Barry 12-bit functionality in tiff package Oct 23, 2012 Ben Bolker 12-bit functionality in tiff package Oct 23, 2012 Joseph Barry 12-bit functionality in tiff package Oct 23, 2012

Addition of plot=F argument to termplot

2 msgs
Terry Therneau Addition of plot=F argument to termplot Oct 19, 2012 Brian Ripley Addition of plot=F argument to termplot Oct 19, 2012

Capturing environment associated with a promise

6 msgs
Hadley Wickham Capturing environment associated with a promise Oct 8, 2012 Duncan Murdoch Capturing environment associated with a promise Oct 8, 2012 Luke Tierney Capturing environment associated with a promise Oct 8, 2012 Gabor Grothendieck Capturing environment associated with a promise Oct 8, 2012 Hadley Wickham Capturing environment associated with a promise Oct 9, 2012 Hadley Wickham Capturing environment associated with a promise Oct 9, 2012

Change in the RNG implementation?

4 msgs
Hervé Pagès Change in the RNG implementation? Oct 19, 2012 Duncan Murdoch Change in the RNG implementation? Oct 19, 2012 Martin Maechler Change in the RNG implementation? Oct 20, 2012 Hervé Pagès Change in the RNG implementation? Oct 21, 2012

Class generator functions for reference classes

4 msgs
John Chambers Class generator functions for reference classes Oct 27, 2012 John Chambers Class generator functions for reference classes Oct 30, 2012 Hadley Wickham Class generator functions for reference classes Oct 30, 2012 John Chambers Class generator functions for reference classes Oct 31, 2012

Creating functions programmatically

10 msgs
Hadley Wickham Creating functions programmatically Oct 3, 2012 Hadley Wickham Creating functions programmatically Oct 3, 2012 Duncan Murdoch Creating functions programmatically Oct 3, 2012 Gabriel Becker Creating functions programmatically Oct 3, 2012 Hadley Wickham Creating functions programmatically Oct 3, 2012 Hadley Wickham Creating functions programmatically Oct 3, 2012 Gabriel Becker Creating functions programmatically Oct 3, 2012 Peter Dalgaard Creating functions programmatically Oct 3, 2012 Peter Meilstrup Creating functions programmatically Oct 3, 2012 Hadley Wickham Creating functions programmatically Oct 3, 2012

Do *not* pass '...' to NextMethod() - it'll do it for you; missing documentation, a bug or just me?

4 msgs
Henrik Bengtsson Do *not* pass '...' to NextMethod() - it'll do it for you; missing documentation, a bug or just me? Oct 16, 2012 Simon Urbanek Do *not* pass '...' to NextMethod() - it'll do it for you; missing documentation, a bug or just me? Oct 16, 2012 Henrik Bengtsson Do *not* pass '...' to NextMethod() - it'll do it for you; missing documentation, a bug or just me? Oct 16, 2012 Henrik Bengtsson Do *not* pass '...' to NextMethod() - it'll do it for you; missing documentation, a bug or just me? Oct 18, 2012

Effect of the R framework on ctype.c

2 msgs
Sylvain Loiseau Effect of the R framework on ctype.c Oct 8, 2012 Simon Urbanek Effect of the R framework on ctype.c Oct 8, 2012

False positive note about ambiguous dispatch

3 msgs
Hervé Pagès False positive note about ambiguous dispatch Oct 1, 2012 John Chambers False positive note about ambiguous dispatch Oct 2, 2012 Hervé Pagès False positive note about ambiguous dispatch Oct 2, 2012

Fastest non-overlapping binning mean function out there?

7 msgs
Henrik Bengtsson Fastest non-overlapping binning mean function out there? Oct 2, 2012 Hervé Pagès Fastest non-overlapping binning mean function out there? Oct 2, 2012 Hervé Pagès Fastest non-overlapping binning mean function out there? Oct 2, 2012 Terry Therneau Fastest non-overlapping binning mean function out there? Oct 3, 2012 Martin Morgan Fastest non-overlapping binning mean function out there? Oct 3, 2012 Martin Morgan Fastest non-overlapping binning mean function out there? Oct 3, 2012 Henrik Bengtsson Fastest non-overlapping binning mean function out there? Oct 4, 2012

Getting ordered factor levels from C

3 msgs
Mark Lilback Getting ordered factor levels from C Oct 24, 2012 Simon Urbanek Getting ordered factor levels from C Oct 24, 2012 Mark Lilback Getting ordered factor levels from C Oct 24, 2012

How deep can/should lists be nested?

4 msgs
Richard Cotton How deep can/should lists be nested? Oct 14, 2012 Duncan Murdoch How deep can/should lists be nested? Oct 14, 2012 Brian Ripley How deep can/should lists be nested? Oct 14, 2012 Richard Cotton How deep can/should lists be nested? Oct 14, 2012

How to build a list with missing values? What is missing, anyway?

10 msgs
Peter Meilstrup How to build a list with missing values? What is missing, anyway? Oct 3, 2012 Hadley Wickham How to build a list with missing values? What is missing, anyway? Oct 3, 2012 Josh O'Brien How to build a list with missing values? What is missing, anyway? Oct 3, 2012 Bert Gunter How to build a list with missing values? What is missing, anyway? Oct 4, 2012 Peter Meilstrup How to build a list with missing values? What is missing, anyway? Oct 4, 2012 Bert Gunter How to build a list with missing values? What is missing, anyway? Oct 4, 2012 Peter Meilstrup How to build a list with missing values? What is missing, anyway? Oct 4, 2012 Bert Gunter How to build a list with missing values? What is missing, anyway? Oct 4, 2012 Peter Dalgaard How to build a list with missing values? What is missing, anyway? Oct 4, 2012 Thomas Lumley How to build a list with missing values? What is missing, anyway? Oct 7, 2012

Incomplete list of default fields in man page for available.packages()

1 msg
Hervé Pagès Incomplete list of default fields in man page for available.packages() Oct 31, 2012

Is there an automatic method for updating an existing CRAN package from R-forge?

6 msgs
S Ellison Is there an automatic method for updating an existing CRAN package from R-forge? Oct 1, 2012 Duncan Murdoch Is there an automatic method for updating an existing CRAN package from R-forge? Oct 1, 2012 Dirk Eddelbuettel Is there an automatic method for updating an existing CRAN package from R-forge? Oct 1, 2012 Spencer Graves Is there an automatic method for updating an existing CRAN package from R-forge? Oct 1, 2012 Paul Gilbert Is there an automatic method for updating an existing CRAN package from R-forge? Oct 1, 2012 Spencer Graves Is there an automatic method for updating an existing CRAN package from R-forge? Oct 1, 2012

Is there an automatic method for updating an existing CRAN package from R-forge? - resolved

1 msg
S Ellison Is there an automatic method for updating an existing CRAN package from R-forge? - resolved Oct 3, 2012

Licensing concerns in porting S-Plus code to R libraries

3 msgs
Chris Green Licensing concerns in porting S-Plus code to R libraries Oct 15, 2012 Duncan Murdoch Licensing concerns in porting S-Plus code to R libraries Oct 16, 2012 Louis Bajuk-Yorgan Licensing concerns in porting S-Plus code to R libraries Oct 17, 2012

Mac and Windows binaries of rJava broken for R-devel?

3 msgs
Hervé Pagès Mac and Windows binaries of rJava broken for R-devel? Oct 18, 2012 Uwe Ligges Mac and Windows binaries of rJava broken for R-devel? Oct 19, 2012 Hervé Pagès Mac and Windows binaries of rJava broken for R-devel? Oct 19, 2012

Minor edit to R-ints doc will be needed for R-2.15.2: axis() no longer uses .Internal()

2 msgs
Josh O'Brien Minor edit to R-ints doc will be needed for R-2.15.2: axis() no longer uses .Internal() Oct 2, 2012 Brian Ripley Minor edit to R-ints doc will be needed for R-2.15.2: axis() no longer uses .Internal() Oct 2, 2012

Multithreaded code in .Call interface

3 msgs
Rob Anderson Multithreaded code in .Call interface Oct 13, 2012 Brian Ripley Multithreaded code in .Call interface Oct 13, 2012 Rob Anderson Multithreaded code in .Call interface Oct 15, 2012

Namespace Dependencies not required

1 msg
Mayank Bansal Namespace Dependencies not required Oct 26, 2012

Problems with install.packages when Ncpus > 1

4 msgs
Winston Chang Problems with install.packages when Ncpus > 1 Oct 5, 2012 Brian Ripley Problems with install.packages when Ncpus > 1 Oct 5, 2012 Winston Chang Problems with install.packages when Ncpus > 1 Oct 6, 2012 Uwe Ligges Problems with install.packages when Ncpus > 1 Oct 6, 2012

R 2.15.2 make check failure on 32-bit --with-blas="-lgoto2"

3 msgs
Paul Gilbert R 2.15.2 make check failure on 32-bit --with-blas="-lgoto2" Oct 26, 2012 Brian Ripley R 2.15.2 make check failure on 32-bit --with-blas="-lgoto2" Oct 26, 2012 Paul Gilbert R 2.15.2 make check failure on 32-bit --with-blas="-lgoto2" Oct 26, 2012

R 2.15.2 still missing two files useful with the X11 icon patch

2 msgs
Dirk Eddelbuettel R 2.15.2 still missing two files useful with the X11 icon patch Oct 26, 2012 Philip Johnson R 2.15.2 still missing two files useful with the X11 icon patch Oct 26, 2012

R 64bit for Windows on Windows 2012 server running Microsoft’s Hyper-V 2012?

2 msgs
Matthew Schall R 64bit for Windows on Windows 2012 server running Microsoft’s Hyper-V 2012? Oct 18, 2012 Uwe Ligges R 64bit for Windows on Windows 2012 server running Microsoft’s Hyper-V 2012? Oct 19, 2012

R CMD SHLIB error bad value (core2) for -mtune= switch

4 msgs
smzyij R CMD SHLIB error bad value (core2) for -mtune= switch Oct 11, 2012 Brian Ripley R CMD SHLIB error bad value (core2) for -mtune= switch Oct 12, 2012 smzyij R CMD SHLIB error bad value (core2) for -mtune= switch Oct 23, 2012 David Winsemius R CMD SHLIB error bad value (core2) for -mtune= switch Oct 23, 2012

R CMD check --force-biarch

3 msgs
Russell Almond R CMD check --force-biarch Oct 18, 2012 Simon Urbanek R CMD check --force-biarch Oct 19, 2012 Brian Ripley R CMD check --force-biarch Oct 19, 2012

R-2.15.1 CMD CHECK output: "Call Sequence"

3 msgs
Mark Cowley R-2.15.1 CMD CHECK output: "Call Sequence" Oct 20, 2012 Brian Ripley R-2.15.1 CMD CHECK output: "Call Sequence" Oct 20, 2012 Mark Cowley R-2.15.1 CMD CHECK output: "Call Sequence" Oct 21, 2012

R_SVN_REVISION breakage on current R trunk.

1 msg
Hin-Tak Leung R_SVN_REVISION breakage on current R trunk. Oct 31, 2012

Rcmd_environ and R_LIBS_{USER,SITE}

11 msgs
Dirk Eddelbuettel Rcmd_environ and R_LIBS_{USER,SITE} Oct 17, 2012 Keith Jewell Rcmd_environ and R_LIBS_{USER,SITE} Oct 18, 2012 Dirk Eddelbuettel Rcmd_environ and R_LIBS_{USER,SITE} Oct 18, 2012 Kasper Daniel Hansen Rcmd_environ and R_LIBS_{USER,SITE} Oct 18, 2012 Dirk Eddelbuettel Rcmd_environ and R_LIBS_{USER,SITE} Oct 18, 2012 Gavin Simpson Rcmd_environ and R_LIBS_{USER,SITE} Oct 19, 2012 Dirk Eddelbuettel Rcmd_environ and R_LIBS_{USER,SITE} Oct 19, 2012 Uwe Ligges Rcmd_environ and R_LIBS_{USER,SITE} Oct 19, 2012 Dirk Eddelbuettel Rcmd_environ and R_LIBS_{USER,SITE} Oct 19, 2012 Uwe Ligges Rcmd_environ and R_LIBS_{USER,SITE} Oct 20, 2012 Dirk Eddelbuettel Rcmd_environ and R_LIBS_{USER,SITE} Oct 20, 2012

Retrieving data from aspx pages

10 msgs
jose ramon mazaira Retrieving data from aspx pages Oct 29, 2012 R. Michael Weylandt Retrieving data from aspx pages Oct 30, 2012 Peter Dalgaard Retrieving data from aspx pages Oct 30, 2012 Paul Gilbert Retrieving data from aspx pages Oct 30, 2012 Gabriel Becker Retrieving data from aspx pages Oct 30, 2012 Paul Gilbert Retrieving data from aspx pages Oct 30, 2012 jose ramon mazaira Retrieving data from aspx pages Oct 30, 2012 Paul Gilbert Retrieving data from aspx pages Oct 30, 2012 jose ramon mazaira Retrieving data from aspx pages Oct 31, 2012 Paul Gilbert Retrieving data from aspx pages Oct 31, 2012

S4 fails to initialize linear hierarchies with intermediate VIRTUAL classes

2 msgs
Martin Morgan S4 fails to initialize linear hierarchies with intermediate VIRTUAL classes Oct 18, 2012 John Chambers S4 fails to initialize linear hierarchies with intermediate VIRTUAL classes Oct 18, 2012

Shouldn't the \usage section tell the truth?

1 msg
Hervé Pagès Shouldn't the \usage section tell the truth? Oct 24, 2012

Spurious warning when calling data() ?

4 msgs
Laurent Gautier Spurious warning when calling data() ? Oct 23, 2012 Duncan Murdoch Spurious warning when calling data() ? Oct 23, 2012 Laurent Gautier Spurious warning when calling data() ? Oct 23, 2012 Brian Ripley Spurious warning when calling data() ? Oct 23, 2012

There is pmin and pmax each taking na.rm, how about psum?

6 msgs
Matt Dowle There is pmin and pmax each taking na.rm, how about psum? Oct 30, 2012 ONKELINX, Thierry There is pmin and pmax each taking na.rm, how about psum? Oct 30, 2012 Matt Dowle There is pmin and pmax each taking na.rm, how about psum? Oct 30, 2012 Hadley Wickham There is pmin and pmax each taking na.rm, how about psum? Oct 30, 2012 Matt Dowle There is pmin and pmax each taking na.rm, how about psum? Oct 30, 2012 Justin Talbot There is pmin and pmax each taking na.rm, how about psum? Oct 31, 2012

Translations in R 2.15.2-to-be

1 msg
Brian Ripley Translations in R 2.15.2-to-be Oct 15, 2012

Typos/omissions/inconsistencies in man page for clusterApply

1 msg
Hervé Pagès Typos/omissions/inconsistencies in man page for clusterApply Oct 23, 2012

Unevaluated .Call

1 msg
Hadley Wickham Unevaluated .Call Oct 11, 2012

Wait for user input with readline()

1 msg
torekp Wait for user input with readline() Oct 19, 2012

What's your opinion about the Transparency Layer feature of Oracle R Enterprise?

1 msg
Ben Bolker What's your opinion about the Transparency Layer feature of Oracle R Enterprise? Oct 17, 2012

What's your opinion about the Transparency Layer feature of Oracle R Enterprise?

1 msg
Xiaobo Gu What's your opinion about the Transparency Layer feature of Oracle R Enterprise? Oct 16, 2012

as.data.frame.matrix() returns an invalid object

3 msgs
Hervé Pagès as.data.frame.matrix() returns an invalid object Oct 10, 2012 Bert Gunter as.data.frame.matrix() returns an invalid object Oct 11, 2012 Peter Dalgaard as.data.frame.matrix() returns an invalid object Oct 13, 2012

concurrent requests (Rook, but I think the question is more general)

13 msgs
Richard Morey concurrent requests (Rook, but I think the question is more general) Oct 24, 2012 Dan Tenenbaum concurrent requests (Rook, but I think the question is more general) Oct 24, 2012 Simon Urbanek concurrent requests (Rook, but I think the question is more general) Oct 24, 2012 Richard Morey concurrent requests (Rook, but I think the question is more general) Oct 24, 2012 Simon Urbanek concurrent requests (Rook, but I think the question is more general) Oct 24, 2012 Richard Morey concurrent requests (Rook, but I think the question is more general) Oct 24, 2012 Simon Urbanek concurrent requests (Rook, but I think the question is more general) Oct 24, 2012 Richard Morey concurrent requests (Rook, but I think the question is more general) Oct 24, 2012 Simon Urbanek concurrent requests (Rook, but I think the question is more general) Oct 24, 2012 Richard Morey concurrent requests (Rook, but I think the question is more general) Oct 25, 2012 Dan Tenenbaum concurrent requests (Rook, but I think the question is more general) Oct 25, 2012 Richard Morey concurrent requests (Rook, but I think the question is more general) Oct 25, 2012 Simon Urbanek concurrent requests (Rook, but I think the question is more general) Oct 25, 2012

contr.sum() and contrast names

4 msgs
Milan Bouchet-Valat contr.sum() and contrast names Oct 27, 2012 John Fox contr.sum() and contrast names Oct 27, 2012 Milan Bouchet-Valat contr.sum() and contrast names Oct 30, 2012 John Fox contr.sum() and contrast names Oct 30, 2012

customize building package vignettes

1 msg
Yihui Xie customize building package vignettes Oct 19, 2012

data.frame() args in transform()

1 msg
Ken Williams data.frame() args in transform() Oct 29, 2012

file.symlink() creates zero-size file/link on Windows 7/NTFS/admin

1 msg
Henrik Bengtsson file.symlink() creates zero-size file/link on Windows 7/NTFS/admin Oct 31, 2012

identical() fails to compare isS4(<S4 instance>) to TRUE

6 msgs
Martin Morgan identical() fails to compare isS4(<S4 instance>) to TRUE Oct 4, 2012 Duncan Murdoch identical() fails to compare isS4(<S4 instance>) to TRUE Oct 4, 2012 Martin Morgan identical() fails to compare isS4(<S4 instance>) to TRUE Oct 4, 2012 Duncan Murdoch identical() fails to compare isS4(<S4 instance>) to TRUE Oct 4, 2012 Martin Morgan identical() fails to compare isS4(<S4 instance>) to TRUE Oct 4, 2012 Martin Morgan identical() fails to compare isS4(<S4 instance>) to TRUE Oct 5, 2012

install.packages() fails if .libPaths() set

6 msgs
Hadley Wickham install.packages() fails if .libPaths() set Oct 29, 2012 Uwe Ligges install.packages() fails if .libPaths() set Oct 30, 2012 Hadley Wickham install.packages() fails if .libPaths() set Oct 30, 2012 Uwe Ligges install.packages() fails if .libPaths() set Oct 30, 2012 Hadley Wickham install.packages() fails if .libPaths() set Oct 30, 2012 Winston Chang install.packages() fails if .libPaths() set Oct 30, 2012

installation of R (2.14.1 and 2.15.1) fails due to [reg-packages.Rout] Error

1 msg
Oliver Kullmann installation of R (2.14.1 and 2.15.1) fails due to [reg-packages.Rout] Error Oct 13, 2012

malloc error in tab-completion: OS X

5 msgs
R. Michael Weylandt malloc error in tab-completion: OS X Oct 7, 2012 Berend Hasselman malloc error in tab-completion: OS X Oct 7, 2012 Brian Ripley malloc error in tab-completion: OS X Oct 7, 2012 Brian Ripley malloc error in tab-completion: OS X Oct 7, 2012 Peter Dalgaard malloc error in tab-completion: OS X Oct 7, 2012

parallel::pvec FUN types differ when v is a list; code simplifications?

1 msg
Martin Morgan parallel::pvec FUN types differ when v is a list; code simplifications? Oct 25, 2012

possible bug in print.bibentry

1 msg
Kasper Daniel Hansen possible bug in print.bibentry Oct 16, 2012

problem with OSX binary package build?

4 msgs
Richard Morey problem with OSX binary package build? Oct 14, 2012 Uwe Ligges problem with OSX binary package build? Oct 15, 2012 Simon Urbanek problem with OSX binary package build? Oct 15, 2012 Richard Morey problem with OSX binary package build? Oct 15, 2012

setTimeLimit(): Is it possible to get the current time limits?

1 msg
Henrik Bengtsson setTimeLimit(): Is it possible to get the current time limits? Oct 10, 2012

setting option in function

4 msgs
Charles Geyer setting option in function Oct 19, 2012 Thomas Lumley setting option in function Oct 19, 2012 Charles Geyer setting option in function Oct 19, 2012 William Dunlap setting option in function Oct 19, 2012

simplify2array edge case

2 msgs
William Dunlap simplify2array edge case Oct 11, 2012 Martin Maechler simplify2array edge case Oct 19, 2012

suppress *specific* warnings?

10 msgs
Ben Bolker suppress *specific* warnings? Oct 21, 2012 Martin Morgan suppress *specific* warnings? Oct 21, 2012 Ben Bolker suppress *specific* warnings? Oct 21, 2012 Luke Tierney suppress *specific* warnings? Oct 22, 2012 Martin Morgan suppress *specific* warnings? Oct 23, 2012 Martin Maechler suppress *specific* warnings? Oct 25, 2012 Duncan Murdoch suppress *specific* warnings? Oct 25, 2012 Martin Maechler suppress *specific* warnings? Oct 26, 2012 Peter Dalgaard suppress *specific* warnings? Oct 26, 2012 Brian Ripley suppress *specific* warnings? Oct 26, 2012

trivial typo in relist.Rd

2 msgs
Ben Bolker trivial typo in relist.Rd Oct 25, 2012 Duncan Murdoch trivial typo in relist.Rd Oct 25, 2012