cleanup_pkg() in tools:::.build_packages() is broken
This has been fixed in R-beta. Thanks! H.
On 10/01/2010 06:31 PM, Herv? Pag?s wrote:
Hi, The cleanup_pkg() function defined the big tools:::.build_packages() function in tools/R/build.R is currently broken. When Makefiles are used cleanup_pkg() doesn't clean anything because of the way system2() is called. For example, the call to Ssystem() on line 304 (Ssystem is a silent version of system2) is basically trying to do this:
> system2(paste(Sys.getenv("MAKE", "make"), makefiles, "clean"))
sh: make -f '/home/hpages/R-2.12/etc//Makeconf' -f Makefile clean: not found But it seems that with this new system2(), the arguments to the system command need to be passed separately thru the 'args' argument. Cheers, H.
Herv? Pag?s Program in Computational Biology Division of Public Health Sciences Fred Hutchinson Cancer Research Center 1100 Fairview Ave. N, M2-B876 P.O. Box 19024 Seattle, WA 98109-1024 E-mail: hpages at fhcrc.org Phone: (206) 667-5791 Fax: (206) 667-1319