R-help - January 2006 - Date View

Tuesday, January 31, 2006 60 emails

liu output hessian matrix in constrOptim Gabor Grothendieck Using a console application from within R Jonathan Weeks Using a console application from within R William Asquith Cauchy distribution limits maneesh deshpande : Model formula question Pontarelli, Brett calculating goodness-of-fit statistics Taka Matzmoto calculating goodness-of-fit statistics Pontarelli, Brett Removing specific v1:v2 combinations from a formula. Gabor Grothendieck Word boundaries and gregexpr in R 2.2.1 Doran, Harold Help with boot() Douglas Bates Mixed-effects models / heterogeneous covariances Richard Morey approximation to ln \Phi(x) Liaw, Andy Help! What does this R command mean? Gabor Grothendieck How do I "normalise" a power spectral density Ionut Florescu Help! What does this R command mean? Leif Kirschenbaum How do I "normalise" a power spectral density elvis@xlsolutions-corp.com February course *** R/Splus Fundamentals and Programming Techniques David Reitter predict.lme / glmmPQL: "non-conformable arguments" Georges Orlowski SVM question Debayan Datta Density estimation with monotonic constaints Bernd Dittmann Kolmogorov-Smirnov Test - what are the exact alternative hypotheses? Lutz Ph. Breitling Mixed-effects models / heterogeneous covariances Liaw, Andy Multiple xyplots on the same page Brian Ripley Stepwise selection and F-enter anf F-remove values Douglas Bates how calculation degrees freedom Simon Blanchet Stepwise selection and F-enter anf F-remove values Ben Bolker Kolmogorov-Smirnov Test on R Pryseley Assam Help with R: functions Adrian Dusa yet another vectorization question Brahm, David sudoku Jesse.Whittington@pc.gc.ca Logistic regression model selection with overdispersed/autocorrelated data Ravi Varadhan Multiple xyplots on the same page PIKAL Petr vector with specified values construction Gabor Grothendieck List of lists??? Michaell Taylor RMySQL install Jonathan Baron Glossay of available R functions Stephane CRUVEILLER List of lists??? Christos Hatzis Glossay of available R functions Dimitris Rizopoulos vector with specified values construction PIKAL Petr vector with specified values construction strinz@freenet.de arules and frequent pattern tree gabriela escati peñaloza how calculation degrees freedom Patrick Burns R relative to statistical packages Christoph Buser Type II SS for fixed-effect in mixed model Uwe Ligges changing the default repositories Jacques VESLOT lattice histogram finetuning vito muggeo warnings in glm (logistic regression) afiwa.kuzeawu@dialego.de TURF (total unreplicated reach and frequency) Analysis program Brian Ripley How do I "normalise" a power spectral density analysis? Patrick Kuss lattice histogram finetuning Peter Dalgaard lme in R (WinXP) vs. Splus (HP UNIX) Assa Yeroslaviz changing the default repositories context grey classifier for histograms? Tom C Cameron How do I "normalise" a power spectral density analysis? Martyn Plummer Timeliness of precompiled binaries--R-2.2.1 still not available as RPM Taka Matzmoto warnings in glm (logistic regression) Brian Ripley Glossay of available R functions PIKAL Petr match() & seq() Bjørn-Helge Mevik 'all' inconsistent? Renaud Lancelot Logistic regression model selection with overdispersed/autocorrelated data

Monday, January 30, 2006 137 emails

Sunday, January 29, 2006 43 emails

Brian Ripley 'all' inconsistent? Gregor Gorjanc Is there anything like a write.fwf() or possibility to print a data.frame without rownames? Brian Ripley beginner Q: hashtable or dictionary? Gabor Grothendieck 'all' inconsistent? Simon Blomberg Help! What does this R command mean? Michael Help! What does this R command mean? Elizabeth Purdom 'all' inconsistent? Gabor Grothendieck How to add two different axis to one plot? Gabor Grothendieck Help! What does this R command mean? Simon Blomberg Help! What does this R command mean? Austin, Matt How to add two different axis to one plot? Michael How to add two different axis to one plot? Michael Help! What does this R command mean? Andrew Robinson How to add two different axis to one plot? Gabor Grothendieck beginner Q: hashtable or dictionary? Michael How to add two different axis to one plot? Hadley Wickham beginner Q: hashtable or dictionary? Gabor Grothendieck beginner Q: hashtable or dictionary? Christos Hatzis beginner Q: hashtable or dictionary? Erin Hodgess problem with mirror selection jim holtman beginner Q: hashtable or dictionary? context grey beginner Q: hashtable or dictionary? Gabor Grothendieck SoS! How to predict new values using linear regression models? Peter Dalgaard Logit regression using MLE Michael SoS! How to predict new values using linear regression models? Williams Scott actuarial prevalence plots Martin Logit regression using MLE Spencer Graves Question about Aggregate Gabor Grothendieck help with read.table() function Duncan Murdoch help with read.table() function Peter Dalgaard help with read.table() function Gabor Grothendieck additional error on read.table function Gabor Grothendieck line numbers oliver wee additional error on read.table function Pogoda, Wendy line numbers Romain Francois help with read.table() function oliver wee help with read.table() function Dieter Menne Selecting Random Subset From Matrix - retaining indices Søren Højsgaard how calculation degrees freedom Aitor Mata Conde textplot from gplots package Brian Ripley extracting 'Z' value from a glm result statistical.model@googlemail.com homogeneity index Chuck Cleland extracting 'Z' value from a glm result

Saturday, January 28, 2006 26 emails

Taka Matzmoto extracting 'Z' value from a glm result Dirk Eddelbuettel What does this command "~" mean? Michael What does this command "~" mean? Spencer Graves Linearize a Function Andrej Kastrin Regex question jim holtman Regex question Bill Venables Creating 3D Gaussian Plot Andrej Kastrin Regex question Andrew Gelman yet another lmer question Peter Dalgaard yet another lmer question Marco Geraci weighted likelihood for lme Gregor Gorjanc draft of Comment on UCLA tech report Laura Quinn Selecting Random Subset From Matrix - retaining indices Spencer Graves fitting generalized linear models using glmmPQL Andrew Gelman yet another lmer question Gabor Grothendieck Learning - Example programs Duncan Murdoch Creating 3D Gaussian Plot Phineas Campbell Learning - Example programs Dirk Eddelbuettel Learning - Example programs Martin P. Holt Learning - Example programs Alan Cobo-Lewis monochrome mosaic plot in vcd package Laura Quinn Creating 3D Gaussian Plot Duncan Murdoch Creating 3D Gaussian Plot Laura Quinn Creating 3D Gaussian Plot Kevin E. Thorpe installation of R on Linux Daniel Nordlund installation of R on Linux

Friday, January 27, 2006 82 emails

Brian Ripley installation of R on Linux Deepayan Sarkar about xyplot in lattice Spencer Graves weighted likelihood for lme Gabor Grothendieck "Conditional" match? Duncan Murdoch Nesting Functions Spencer Graves draft of Comment on UCLA tech report Daniel Nordlund installation of R on Linux Manuel Morales Nesting Functions Peter Dalgaard how calculation degrees freedom Andrew Complex Matrix Exponentials. Peter Dalgaard how calculation degrees freedom Douglas Bates how calculation degrees freedom Douglas Bates how calculation degrees freedom Eliot McIntire Partial Canonical Correlation Liaw, Andy avoiding warning messages on the screen with 'lme' Rob Goedman Previously compilation procedure on Mac OS X no longer works Peter Dalgaard how calculation degrees freedom Marco Geraci avoiding warning messages on the screen with 'lme' Joshua Gilbert Classifying Intertwined Spirals Uwe Ligges lme4_0.995-2/Matrix_0.995-4 upgrade introduces error messages (change management) White, Charles E WRAIR-Wash DC lme4_0.995-2/Matrix_0.995-4 upgrade introduces error messages (change management) Dylan Beaudette understanding patterns in categorical vs. continuous data webmaster@actu-cv.com Refused Mail: Mail En Retour: R User "Conditional" match? Brian Ripley Factor Analysis Liaw, Andy Classifying Intertwined Spirals Liaw, Andy save trained randomForest model luk save trained randomForest model Krish Krishnan Factor Analysis Sung Soo Kim language setting of the R Window in Windows XP Korean ed. Gabor Grothendieck regular expressions, sub Seth Falcon list entries file into a list Søren Højsgaard how calculation degrees freedom Joshua Gilbert Classifying Intertwined Spirals Kort, Eric Image Processing packages Albert Vilella list entries file into a list Robert Duval draft of Comment on UCLA tech report Thomas Kaliwe Image Processing packages Douglas Bates how calculation degrees freedom Kort, Eric Image Processing packages Nick Drew panel function with barchart (lattice) Charles Annis, P.E. Image Processing packages Rajarshi Guha identifying points on a clusplot Roger Bivand Previously compilation procedure on Mac OS X no longer works Antigen_PEGASUS@cug1.umt.edu Antigen forwarded attachment isaac Kohane Previously compilation procedure on Mac OS X no longer works gabriela escati peñaloza how calculation degrees freedom Seth Falcon substituting an object not found Tom C Cameron How do I "normalise" a power spectral density analysis? Gabor Grothendieck Prediction when using orthogonal polynomials in regression Gabor Grothendieck substituting an object not found Stephan Matthiesen Image Processing packages Ben Bolker why did not data.table work? Patrick Burns draft of Comment on UCLA tech report Duncan Murdoch substituting an object not found Brian Ripley How to change the GUI language option Gábor Csárdi substituting an object not found Mikkel Grum substituting an object not found Chanchal Kumar How to change the GUI language option Bill Venables How do you convert this from S Plus to R - any help appreciated . thanks Muhammad Subianto How to convert decimals to fractions Muhammad Subianto How to convert decimals to fractions Markus Preisetanz Clustering Question Achim Zeileis Prediction when using orthogonal polynomials in regression Michael Townsley monochrome mosaic plot in vcd package paul sorenson regular expressions, sub Philippe GROSJEAN regular expressions, sub Dimitris Rizopoulos How to convert decimals to fractions paul sorenson updated r-help traffic plots Brian Ripley How to convert decimals to fractions Berwin A Turlach How to convert decimals to fractions Brian Ripley regular expressions, sub Muhammad Subianto How to convert decimals to fractions Barry Rowlingson How do you convert this from S Plus to R - any help appreciated . thanks Christian Schulz regular expressions, sub Philippe GROSJEAN extracting lower diagonal elements of a matrix Philippe GROSJEAN What's wrong with Rcmdr? Gesmann, Markus footnote in postscript lattice Martin Lam Data management problem: convert text string to matrix of 0's and 1's Martin Maechler cluster analysis for 80000 observations Michael why did not data.table work? Martin Maechler Justification of dendrogram labels

Thursday, January 26, 2006 101 emails

Jin.Li@csiro.au about xyplot in lattice Brian Ripley generating random numbers from the logit-normal distribution ? Romain Francois measuring computation time Romain Francois generating random numbers from the logit-normal distribution ? vincent@7d4.com extracting lower diagonal elements of a matrix Taka Matzmoto measuring computation time Christos Hatzis extracting lower diagonal elements of a matrix Jacques VESLOT extracting lower diagonal elements of a matrix Taka Matzmoto extracting lower diagonal elements of a matrix Gabor Grothendieck why did not data.table work? Michael why did not data.table work? Wennerberg, Morten Trimming / Removing leading and following blanks using Windows version Taka Matzmoto generating random numbers from the logit-normal distribution ? Matthew Beason R compile on AIX 5.2 Liaw, Andy about lm restrictions... Liaw, Andy understanding patterns in categorical vs. continuous data Cleber N.Borges about lm restrictions... Duncan Murdoch Nesting Functions Manuel Morales Nesting Functions Liaw, Andy cluster analysis: "error in vector("double", length): given vector size is too big {Fehler in vector("double", length) : angegebene Vektorgröße ist zu groß} Spencer Graves nlme in R v.2.2.1 and S-Plus v. 7.0 Debayan Datta question about density estimation with monotonic constraints Duncan Mackay Justification of dendrogram labels Deepayan Sarkar footnote in postscript lattice Deepayan Sarkar xyplot: making strip function aware of panel.number Francisco J. Zagmutt footnote in postscript lattice Benjamin Tyner xyplot: making strip function aware of panel.number Secrist, Kevin Concept Mapping of Qualitative Data Brian Ripley How do you convert this from S Plus to R - any help appreciated . thanks Dean Sonneborn footnote in postscript lattice Briggs, Meredith M How do you convert this from S Plus to R - any help appreciated . thanks Douglas Grove can I do this with read.table?? Kjetil Halvorsen can I do this with read.table?? Thomas Lumley can I do this with read.table?? gabriela escati peñaloza degrees freedom in nlme Douglas Grove can I do this with read.table?? Uwe Ligges DOS command using "system" jim holtman Data management problem: convert text string to matrix of 0's and 1's jim holtman DOS command using "system" Gabor Grothendieck understanding patterns in categorical vs. continuous data Kuba boot & boot.ci Dave Roberts understanding patterns in categorical vs. continuous data Markus Preisetanz cluster analysis: "error in vector("double", length): given vector size is too big {Fehler in vector("double", length) : angegebene Vektorgröße ist zu groß} Kort, Eric Image Processing packages Sundar Dorai-Raj (no subject) Anders Nielsen Automatic differentiation (was: Re: D(dnorm...)?) Bert Gunter understanding patterns in categorical vs. continuous data Dylan Beaudette understanding patterns in categorical vs. continuous data Jiang, Jincai (Institutional Securities Management) (no subject) Michael What's wrong with JGR? Thomas Lumley Data management problem: convert text string to matrix of 0's and 1's Michael What's wrong with Rcmdr? Taka Matzmoto DOS command using "system" Dale Steele Data management problem: convert text string to matrix of 0's and 1's Kelvin Lam Clustering Question Liaw, Andy how to compare glm parameter values Dieter Menne How to make two side-by side trellis plots same size Bert Gunter how to test robustness of correlation Alexandra R. M. de Almeida Re-writing the problem of Using special characters Gabor Grothendieck how to test robustness of correlation Joost van Evert how to compare glm parameter values Brian Ripley Using special characters Ajay Shah Prediction when using orthogonal polynomials in regression Bert Gunter how to test robustness of correlation Lapointe, Pierre XML Request in R: Pointers/examples needed roger bos maximizing available memory under windows XP Deepayan Sarkar How to make two side-by side trellis plots same size Bert Gunter how to test robustness of correlation Marc Schwartz (via MN) efficiency with "%*%" yang.x.qiu@gsk.com how to test robustness of correlation Hans Skaug Automatic differentiation (was: Re: D(dnorm...)?) Alexandra R. M. de Almeida Using special characters Brian Ripley maximizing available memory under windows XP Dieter Menne How to make two side-by side trellis plots same size John Fox What's wrong with Rcmdr? Deepayan Sarkar How to make two side-by side trellis plots same size Uwe Ligges efficiency with "%*%" Philippe GROSJEAN efficiency with "%*%" roger bos maximizing available memory under windows XP Uwe Ligges efficiency with "%*%" Dimitri Szerman efficiency with "%*%" Liaw, Andy list entries file into a list Alberto Murta Automatic differentiation (was: Re: D(dnorm...)?) PIKAL Petr reducing learning curves? Thomas Steiner persp() and character labels for axis Brian Ripley construct a bundle, subdirs do not exist? Dieter Menne How to make two side-by side trellis plots same size Thomas Steiner persp() and character labels for axis Gábor Csárdi reducing learning curves? Christian Schulz What's wrong with JGR? Simon Wood gam Philippe GROSJEAN reducing learning curves? Albert Vilella list entries file into a list stefano iacus What's wrong with Rcmdr? Michael reducing learning curves? Michael What's wrong with Rcmdr? Philippe GROSJEAN What's wrong with Rcmdr? stefano iacus What's wrong with Rcmdr? Michael What's wrong with Rcmdr? Michael What's wrong with JGR? PIKAL Petr Hist for different levels of a factor

Wednesday, January 25, 2006 92 emails

Tuesday, January 24, 2006 109 emails

Monday, January 23, 2006 89 emails

Sunday, January 22, 2006 29 emails

Hannu Kahra NAs in optim Uwe Ligges Latest revision of lme4 requires 'Matrix' >= 0.995.2 but that version is not available on CRAN Brian Ripley formatC slow? (or how can I make this function faster? Brian Ripley NAs in optim Nachiketa Sahoo will vectorization help in this case? Nachiketa Sahoo will vectorization help in this case? John Logsdon Latest revision of lme4 requires 'Matrix' >= 0.995.2 but that version is not available on CRAN Hadley Wickham formatC slow? (or how can I make this function faster? Søren Højsgaard Latest revision of lme4 requires 'Matrix' >= 0.995.2 but that version is not available on CRAN Charles and Kimberly Maner Making a markov transition matrix Gábor Csárdi Execute a list of R instructions from a file pau carre Execute a list of R instructions from a file Paul Murrell change lattice panel background color Spencer Graves lme model specification (Ted Harding) Solve for x in Ax=B with vectors, not matrices Stratford, Jeffrey regression with nestedness Lapointe, Pierre Solve for x in Ax=B with vectors, not matrices Hannu Kahra NAs in optim (Ted Harding) White Noise jim holtman White Noise Alexandre Santos Aguiar Difference between two correlation coefficients John Fox Application of R and MNP Andy Wong Application of R and MNP Laura Quinn White Noise Nadege Nana Rank Product Bill Venables Making a markov transition matrix Brian Ripley function for rowMedian? Steffen Katzner Error in 1:object$rank : NA/NaN argument Philippe GROSJEAN function for rowMedian?

Saturday, January 21, 2006 26 emails

Spencer Graves numericDeriv() giving a vector when multiple variables input Ajay Shah Making a markov transition matrix Gabor Grothendieck Making a markov transition matrix Bill Venables Making a markov transition matrix jim holtman Making a markov transition matrix jim holtman Making a markov transition matrix Ajay Shah Making a markov transition matrix N.W.Galwey Means from balanced incomplete block design Martin Maechler mcmcsamp() in lmer Spencer Graves mcmcsamp() in lmer Richard Chandler abline() or predict.lm() when log="x" Douglas Bates mcmcsamp() in lmer Spencer Graves mcmcsamp() in lmer Gabor Grothendieck converting help files with Sd2Rd Brian Ripley Latest revision of lme4 requires 'Matrix' >= 0.995.2 but that version is not available on CRAN Uwe Ligges converting help files with Sd2Rd Fredrik Lundgren converting help files with Sd2Rd Marco Geraci function kde2d Spencer Graves Influence measure + lme ? Uwe Ligges Latest revision of lme4 requires 'Matrix' >= 0.995.2 but that version is not available on CRAN Søren Højsgaard Latest revision of lme4 requires 'Matrix' >= 0.995.2 but that version is not available on CRAN Uwe Ligges Latest revision of lme4 requires 'Matrix' >= 0.995.2 but that version is not available on CRAN Richard Chandler abline() or predict.lm() when log="x" Peter Dalgaard Latest revision of lme4 requires 'Matrix' >= 0.995.2 but that version is not available on CRAN Søren Højsgaard Latest revision of lme4 requires 'Matrix' >= 0.995.2 but that version is not available on CRAN Martin Maechler fractional factorial design in R

Friday, January 20, 2006 55 emails

Spencer Graves Help with mixed effects models William H. Asquith Latex problem in Rd file Liaw, Andy Run R in background? Marc Schwartz command in survival package Douglas Grove " 'x' must be numeric" Naiara S. Pinto " 'x' must be numeric" François Pinard Display an Image on a Plane Thomas Lumley command in survival package George W. Gilchrist PCA: eigen/princomp vs. svd/prcomp Richard Chandler abline() or predict.lm() when log="x" Linda Lei command in survival package Bert Gunter fractional factorial design in R luk Run R in background? Peter Dalgaard abline() or predict.lm() when log="x" Roberto Furlan fractional factorial design in R Bert Gunter indexing within a function Arianne Albert indexing within a function Marc Schwartz (via MN) Selecting data frame components by name - do you know a shorter way? Knut Krueger some EPS rotated in journal preview Richard Chandler abline() or predict.lm() when log="x" Liaw, Andy Selecting data frame components by name - do you know a s horter way? roger bos Selecting data frame components by name - do you know a shorter way? Marc Schwartz (via MN) Selecting data frame components by name - do you know a shorter way? Peter Dalgaard cron job install/update problems: tcltk can't find display (installing e.g., pbatR) Chuck Cleland Selecting data frame components by name - do you know a shorter way? Douglas Grove Selecting data frame components by name - do you know a shorter way? Marco Geraci big difference in estimate between dmvnorm and dnorm, how come? Michael Reinecke Selecting data frame components by name - do you know a shorter way? Brian Ripley function for rowMedian? singyee ling questions about coxph.detail Paul Johnson cron job install/update problems: tcltk can't find display (installing e.g., pbatR) Philippe GROSJEAN function for rowMedian? Friedrich Leisch Downloads -- possible bug? Ben Bolker big difference in estimate between dmvnorm and dnorm, how come? Liaw, Andy function for rowMedian? Sundar Dorai-Raj function for rowMedian? Spencer Graves lme model specification saverio vicario big difference in estimate between dmvnorm and dnorm, how come? Max Kauer function for rowMedian? George W. Gilchrist PCA: eigen/princomp vs. svd/prcomp Hadley Wickham Dynamic Programming in R Brian Ripley assign object to list Bill Simpson change fitted line colour in lme() trellis plot? Jacques VESLOT assign object to list Brian Ripley assign object to list Arne.Muller@sanofi-aventis.com Dynamic Programming in R Christian Bieli assign object to list Henric Nilsson gam Barry Rowlingson Display an Image on a Plane Brian Ripley Passing variable arguments to functions vito muggeo Breakpoints for multiple variables using Segmented Ernesto Adorio Passing variable arguments to functions Jens Oehlschlägel Dynamic Programming in R Alfonso M Sanchez-Lafuente Type III SS in generalized linear mixed models Steffen Katzner Within-Subjects ANOVA & comparisons of individual means

Thursday, January 19, 2006 69 emails

David Meyer Help with plot.svm from e1071 Greg Tarpinian Plotting an lme( ) object Gabor Grothendieck Dynamic Programming in R Francisco J. Zagmutt Loop through factors without changing to numerics Chia, Yen Lin Loop through factors without changing to numerics Abd Rahman Kassim Legend Outside Plot Dimension François Pinard Dynamic Programming in R Abd Rahman Kassim Legend Outside Plot Dimension Bert Gunter Dynamic Programming in R Deepayan Sarkar change fitted line colour in lme() trellis plot? Deepayan Sarkar change fitted line colour in lme() trellis plot? Arnab mukherji Dynamic Programming in R Deepayan Sarkar Plotting an lme( ) object Patrick Connolly Canonical Variance Analysis by any other name? Abd Rahman Kassim Legend Outside Plot Dimension Bill Simpson change fitted line colour in lme() trellis plot? Sean Davis matrix export Eric Pante matrix export Mark Kimsey Editing Partial Correlation Matrix I.Szentirmai gam David James RSQLite Eric Pante matrix export Peter Dalgaard Downloads -- possible bug? Uwe Ligges Downloads -- possible bug? Brian Ripley function kde2d Elizabeth Purdom Downloads -- possible bug? Marta Colombo function kde2d Marta Colombo (no subject) Martin Maechler empirical maximum likelihood estimation Joshua Gilbert Using svm.plot with mlbench.spirals. Erich Neuwirth html excel file david v help on statistics and code Martin Maechler R Commenting Style Zhesi He how to select a node in dendrogram/tree Christian Jones aggregating variables with pca Henric Nilsson Plotting an lme( ) object PIKAL Petr factor or not factor that is a question Roger Koenker Tobit estimation? Laura Quinn Creating dipole field portnoy@supereva.it obtaining ROC curve from Nearest Shrunken Centroids (pamr) Peter Dalgaard html excel file Peter Dalgaard Can't load Matrix 0.995-1 for lme4 Brian Ripley princomp() with missing values in panel data? roger bos html excel file Martin Henry H. Stevens Can't load Matrix 0.995-1 for lme4 PIKAL Petr html excel file Henric Nilsson princomp() with missing values in panel data? Brian Ripley empirical maximum likelihood estimation Romain Francois R Commenting Style Brian Ripley Minimizing mahalanobis distance to negative orthant Achim Zeileis Tobit estimation? Dominik Heinzmann empirical maximum likelihood estimation DED (David George Edwards) Minimizing mahalanobis distance to negative orthant Kevin E. Thorpe R Commenting Style Sean Davis packages about microarray analysis Brian Ripley se.fit in predict.nls Ken Knoblauch Tobit estimation? Renaud Lancelot ICC for Binary data Andrej Kastrin packages about microarray analysis Manuel Gutierrez se.fit in predict.nls Vincent Deng packages about microarray analysis Paul Roebuck R Commenting Style Stefan Semmeling html excel file Knut Krueger some EPS rotated in journal preview Ajay Shah Tobit estimation? Brian Ripley Canonical Variance Analysis by any other name? Martin Maechler creating objects with a slot of class formula, using new PIKAL Petr Legend Outside Plot Dimension robin hankin new R package: UNTB

Wednesday, January 18, 2006 87 emails

Tuesday, January 17, 2006 93 emails

Kenneth Cabrera Data frame index? Gregor Gorjanc Current state of support for BUGS access for Linux users? Paul Johnson Current state of support for BUGS access for Linux users? Andrew Robinson Bootstrapping help Ben Ridenhour Bootstrapping help Paul Johnson Current state of support for BUGS access for Linux users? Anthony Darrouzet-Nardi Installing RMySQL on Mac OS X 10.4.4 Augusto.Sanabria@ga.gov.au Calculation of daily max Spencer Graves find mean of a list of timeseries paul sorenson Windows ESS for XEmacs - installer Robert Baer Newbie question on using friedman.test() Brian Ripley Step.glm() question Brian Ripley log-linear analysis - calculate treatment effects Brian Ripley have difficulty in installing packages Gregor Gorjanc Current state of support for BUGS access for Linux users? Brian Ripley symbols function Brian Ripley array question Deepayan Sarkar label of second y-axis in xyplot (lattice) John Fox Anova problem with order of terms in model Seungho Huh have difficulty in installing packages Spencer Graves fitted values from lmer (lme4 0.98) Frank E Harrell Jr Cumulative Density Plots (Hmisc/lattice) Thomas Lumley symbols function Douglas Bates fitted values from lmer (lme4 0.98) Bert Gunter Anova problem with order of terms in model Jean Eid symbols function Uwe Ligges Current state of support for BUGS access for Linux users? Peter Dalgaard fitted values from lmer (lme4 0.98) Bert Gunter Vector indices Marina Niessner Bivariate Normal Variables and correlation Smith, Phil (CDC/CCID/NCIRD) Step.glm() question Julien Martin Anova problem with order of terms in model Charles C. Berry new comer's question Dave Roberts Clustering function Hao Liu help with parsing multiple coxph() results Becker Cordula log-linear analysis - calculate treatment effects Richard Reiss Using values from a function with complex output Warnes, Gregory R gplots Deepayan Sarkar Cumulative Density Plots (Hmisc/lattice) Chang Shen array question Hao Liu help with parsing multiple coxph() results Mike Bock Cumulative Density Plots (Hmisc/lattice) Fredrik Lundgren help with parsing multiple coxph() results Douglas Bates fitted values from lmer (lme4 0.98) Bill Simpson lme model specification Hao Liu help with parsing multiple coxph() results Hao Liu help with coxph() for multiple genes Nagu CLuster analysis with only nominal variables Alexandra R. M. de Almeida Regression with no-intercept Werner Wernersen Vector indices Bill Kules Newbie question on using friedman.test() N. Goodacre Clustering function david v Cannot convert from phylo to hclust , error!!??? Douglas Bates multiple GLMs with lmList in lme4 Colin Beale removing loop in array recalculation Ales Ziberna Printing numerical matrices Paul Johnson Current state of support for BUGS access for Linux users? Leif Kirschenbaum Scientific notation in plots Deepayan Sarkar Legends in xyplot Remigijus Lapinskas survival with Weibull Olivier ETERRADOSSI Kriging for d>3 Gabor Grothendieck Printing numerical matrices Daniel Farewell multiple GLMs with lmList in lme4 Ravi Varadhan Legends in xyplot Ronnie Babigumira importing from Stata Thomas Lumley multiple GLMs with lmList in lme4 Gabor Grothendieck For each element in vector do... Aleš Žiberna Printing numerical matrices Thomas Lumley importing from Stata Göran Broström Indentation in emacs Barry Rowlingson For each element in vector do... Dimitris Rizopoulos For each element in vector do... Chuck Cleland For each element in vector do... Andrej Kastrin For each element in vector do... Farrel Buchinsky Installing a package yet it will not work. david v Consensus dendogram help? Duncan Murdoch how can i locate the source code of a module quickly? 维王 how can i locate the source code of a module quickly? Sean Davis RODBC sqlQuery question Brian Ripley Font size of axis labels A.J. Rossini xlispstat and R modono@utvinternet.com Perl array conversion in R to compare plots. Jacques VESLOT Problems of data processing Daniel Farewell multiple GLMs with lmList in lme4 Hilmar Berger Font size of axis labels Florent Bonneu Problems of data processing Tom For each element in vector do... Dieter Menne lme output robin hankin Kriging for d>3 Christian Lasarczyk Kriging for d>3 Eivind Smørgrav Kriging for d>3 Uwe Ligges Legends in xyplot Christian Schulz new comer's question

Monday, January 16, 2006 63 emails

Uwe Ligges Dynamic load Uwe Ligges Current state of support for BUGS access for Linux users? Dr. Walter H. Schreiber Standardized beta-coefficients in regression Brian Ripley princomp() with missing values in panel data? Gabor Grothendieck Calculation of daily max Jacques VESLOT Problems of data processing Augusto.Sanabria@ga.gov.au Calculation of daily max Mikael Anderson Dynamic load Spencer Graves first derivative of a time series Liaw, Andy Installing a package yet it will not work. John Fox importing from Stata Farrel Buchinsky Installing a package yet it will not work. Gabor Grothendieck off topic: how is xlispstat used in the industry? Peter Flom Standardized beta-coefficients in regression Wensui Liu off topic: how is xlispstat used in the industry? Cunningham Kerry looking for ENAR partner Ravi Varadhan Legends in xyplot ivo welch princomp() with missing values in panel data? fhong@salk.edu How to analysis Y98 chips using RankProd package? Paul Johnson Current state of support for BUGS access for Linux users? Chia, Yen Lin singular convergence(7)? Daniel A. Powers fitted values from lmer (lme4 0.98) Dimitri Szerman importing from Stata Knut Krueger new comer's question Knut Krueger rsq.rpart is there any R-Square value like in SPSS? Chang Shen new comer's question Chuck Cleland rsq.rpart is there any R-Square value like in SPSS? Brian Ripley run-time of an R function Knut Krueger rsq.rpart is there any R-Square value like in SPSS? Knut Krueger problem solved Knut Krueger rsq.rpart not found ... Francisco J. Zagmutt Poisson and negative binomial models with truncation Alexandre Santos Aguiar run-time of an R function Uwe Ligges run-time of an R function Uwe Ligges Problem with plot() Rossi, Peter E. run-time of an R function Andrej Kastrin Problem with plot() Antje Schüle label of second y-axis in xyplot (lattice) Brian Ripley Standardized beta-coefficients in regression John Logsdon lme output a.menicacci@fr.fournierpharma.com Homogenous groups building - Randomisation Gabor Grothendieck Standardized beta-coefficients in regression Stephen gplots Dr. Walter H. Schreiber Standardized beta-coefficients in regression Tolga Uzuner Powell's Metod Ravi Varadhan Powell's Metod Brian Ripley Powell's Metod Gabor Grothendieck General partition search algorithm (local search, genetic algorithm, ...) Bjørn-Helge Mevik New package lspls Katrin Bernath Poisson and negative binomial models with truncation Florent Bonneu Problems of data processing Chia-Wen Chang - Cleo How to analysis Y98 chips using RankProd package? Jacques VESLOT Problems of data processing Florent Baty Snow Rmpi Heterogeneous Cluster Florent Bonneu Problems of data processing Brian Ripley Matrix package download problem Uwe Ligges Matrix package download problem N. Goodacre R function for Gap statistic Par Leijonhufvud Kite diagrams Ashley Ford Matrix package download problem Barry Rowlingson Kite diagrams Achim Zeileis R-help Digest, Vol 35, Issue 14 Aleš Žiberna General partition search algorithm (local search, genetic algorithm, ...)

Sunday, January 15, 2006 31 emails

Par Leijonhufvud Kite diagrams Adrian Baddeley envelopes of simulations Spencer Graves Homogenic groups generation - Randomisation Spencer Graves glmmPQL / "system is computationally singular" Spencer Graves trouble with extraction/interpretation of variance structure para meters from a model built using gnls and varConstPower Douglas Bates lmer and handling heteroscedasticity Charles C. Berry LaTeX slide show (Was: Re: Taking code from packages) Tolga Uzuner Powell's Metod Spencer Graves lmer with nested/nonnested groupings? Brian Ripley Powell's Metod voodooochild@gmx.de invalid "mode" of argument optimize gynmeerut MLE Jonathan Baron Firefox slide show with embedded SVG Tolga Uzuner Powell's Metod Brian Ripley Multiple comparison and two-way ANOVA design Andrej Kastrin Multiple comparison and two-way ANOVA design Andrej Kastrin Equal length axis Peter Dalgaard Raw Data Input Brian Ripley Raw Data Input Peter Dalgaard Raw Data Input Brian Ripley problems with glm Andrej Kastrin Equal length axis Roland R Regoes problems with glm Andy Wong Raw Data Input Bill Venables problems with glm Roland R Regoes problems with glm Vivek Satsangi / Operator not meaningful for factors Brian Ripley / Operator not meaningful for factors Gabor Grothendieck / Operator not meaningful for factors Sara Mouro How do I put these functions "together"? Vivek Satsangi / Operator not meaningful for factors

Saturday, January 14, 2006 25 emails

Brian Ripley example(plot) question Brian Ripley R-help Digest, Vol 35, Issue 14 Spencer Graves glmmPQL and variance structure Spencer Graves panel data unit root tests Werner Wernersen R-help Digest, Vol 35, Issue 14 Duncan Murdoch Can I call a R function from within C/C++ directly? Robert Baer example(plot) question Yingfu Xie Can I ask for the C code inside an R function using .C? (Thanks) Shaozhong Zhao Can I call a R function from within C/C++ directly? Deepayan Sarkar how to obtain "par(ask=TRUE)" with trellis-plots Spencer Graves glmmPQL and variance structure Trevor Hastie Data Mining Course Marco Geraci better way to replace missing values with zero Adrian Dusa R newbie example code question Adrian Dusa R newbie example code question Deepayan Sarkar change lattice panel background color Uwe Ligges problems installing lattice on Windows; was: (no subject) Michael Anyadike-Danes (no subject) Janusz Kawczak LaTeX slide show (Was: Re: Taking code from packages) Leo Gürtler lmer and handling heteroscedasticity Duncan Murdoch LaTeX slide show (Was: Re: Taking code from packages) voodooochild@gmx.de Different length of objects voodooochild@gmx.de Different length of objects Dieter Menne Syntax for linear mixed model Peter Dalgaard how to obtain "par(ask=TRUE)" with trellis-plots

Friday, January 13, 2006 68 emails

Henrik Bengtsson LaTeX slide show (Was: Re: Taking code from packages) Waichler, Scott R change lattice panel background color William H. Asquith Rd file--latex {array} help Spencer Graves panel data unit root tests Gabor Grothendieck Variance-covariance by factor Sundar Dorai-Raj apply Tony Plate for loop should check the looping index !! Peter Dalgaard for loop should check the looping index !! N.W.Galwey Syntax for linear mixed model Hadley Wickham Idempotent apply johan Faux for loop should check the looping index !! Sean Davis R and filemaker pro DB Francisco J. Zagmutt Can I ask for the C code inside an R function using .C? Bert Gunter apply Marco Geraci update 'groupedData' and 'lme' objects Gabor Grothendieck find mean of a list of timeseries Guenther, Cameron apply Yang, Richard Variance-covariance by factor Liaw, Andy Can I ask for the C code inside an R function using .C? roger bos better way to replace missing values with zero Francisco J. Zagmutt Can I ask for the C code inside an R function using .C? David Reitter glmmPQL: Na/NaN/Inf in foreign function call Brian Ripley Saving data in an R package - how to maintain that t avariable is a 'factor' when it is coded as 1, 2, 3... jim holtman Saving data in an R package - how to maintain that t avariable is a 'factor' when it is coded as 1, 2, 3... Spencer Graves CRAN versions of lme4/Matrix don't appear to work with R 2.1.1 Søren Højsgaard Saving data in an R package - how to maintain that t avariable is a 'factor' when it is coded as 1, 2, 3... Ingmar Visser Can I ask for the C code inside an R function using .C? Liaw, Andy Can I ask for the C code inside an R function using .C? Brian Ripley Taking code from packages Yingfu Xie Can I ask for the C code inside an R function using .C? (Ted Harding) R newbie example code question Gabor Grothendieck Taking code from packages Peter Dalgaard Problems installing R 2.2.1 Michael Friendly R newbie example code question Jeff Gentry Taking code from packages Anne P Shelton Problems installing R 2.2.1 McGehee, Robert Scientific notation in plots Ben Bolker Curve fitting Liaw, Andy Data with no separator BXC (Bendix Carstensen) Course in Statistical Practise in Epidemiology using R Oddmund NordgÃ¥rd Scientific notation in plots Gabor Grothendieck Taking code from packages Dimitris Rizopoulos Getting the numeric value of difftime Dieter Menne "infinite recursion" in do.call when lme4 loaded only Gabor Grothendieck Getting the numeric value of difftime Barry Rowlingson Getting the numeric value of difftime Ales Ziberna Taking code from packages White, Charles E WRAIR-Wash DC CRAN versions of lme4/Matrix don't appear to work with R 2.1.1 Ingmar Visser multivariate markov switching Iain Gallagher Scientific notation in plots Christian Neumann Getting the numeric value of difftime Carlo Fezzi multivariate markov switching Duncan Murdoch Taking code from packages Michael Bibo R and filemaker pro DB Tom find mean of a list of timeseries Oddmund NordgÃ¥rd Scientific notation in plots Brian Ripley edit.data.frame - summary Martin Maechler "infinite recursion" in do.call when lme4 loaded only Ernesto Jardim help with gepRglm::likfit.glsm Martin Maechler "infinite recursion" in do.call when lme4 loaded only gj first derivative of a time series Fredrik Lundgren edit.data.frame - summary Ruben Roa help with gepRglm::likfit.glsm Brian Ripley Basis of fisher.test (Ted Harding) Basis of fisher.test David Firth edit.data.frame ndurand@fr.abx.fr Curve fitting Brian Ripley edit.data.frame

Thursday, January 12, 2006 79 emails

Wednesday, January 11, 2006 74 emails

Roger Bivand a series of 1's and -1's Jacques VESLOT matrix logic ronggui Loading Excel file into Limma John Loading Excel file into Limma Wensui Liu Loading Excel file into Limma ahimsa campos arceiz Loading Excel file into Limma N. Goodacre Loading Excel file into Limma Spencer Graves glmmPQL "error" message (was 'data order affects glmmPQL') liuliang@stat.ohio-state.edu question for mshapiro test S.C. Wong Log-likelihood for Multinominal Probit Regression Model Jack Tanner data order affects glmmPQL Chuck Cleland SPSS and R ? do they like each other? McGehee, Robert a series of 1's and -1's Andrew Robinson Problem with making Matrix Lisa Solomon March 29-31, Data Mining Conference, Southern California, Early-bird Deadline Savings of $50 Gabor Grothendieck updating formula inside function Mark Leeds a series of 1's and -1's giovanni parrinello Strange behaviour of load Christian Bieli updating formula inside function Deepayan Sarkar 4 smoothed lines on xyplot Ales Ziberna Regular expressions Ales Ziberna Regular expressions Patrick Connolly Space between axis label and tick labels Sundar Dorai-Raj statistical formulation of a problem Mark Leeds statistical formulation of a problem Gabor Grothendieck Dates Uzuner, Tolga Dates Brett Magill Improving R-Intro {was "Wikis etc."} Taylor, Z Todd Regular expressions Dean Sonneborn 4 smoothed lines on xyplot Douglas Bates lmer(): nested and non-nested factors in logistic regression Peter Dalgaard Regular expressions Ales Ziberna Regular expressions Thomas Lumley SPSS and R ? do they like each other? david v Permutation columns or boostrapping Jonathan Wang Looking for functions that do the "nearest neighbor method" and the "variable kernel method" Michael Reinecke SPSS and R ? do they like each other? Bert Gunter complex matrix manipulation question Brian Ripley Datetimes differences Brian Ripley Obtaining the adjusted r-square given the regression coefficients jim holtman Datetimes differences Gabor Grothendieck Datetimes differences Gabor Grothendieck matrix logic bonneu@cict.fr Datetimes differences Wilhelm B. Kloke F-test degree of freedoms in lme4 ? Deepayan Sarkar how to obtain "par(ask=TRUE)" with trellis-plots Spencer Graves information Uwe Ligges matrix logic Chuck Cleland SPSS and R ? do they like each other? t c matrix logic Michael Reinecke SPSS and R ? do they like each other? Millo Giovanni Obtaining the adjusted r-square given the regression coefficients Frank E Harrell Jr Binary logistic modelling: setting conditions (defining thresholds) in the fitted model (lrm) Seth Falcon gregexpr() - length of the matched text to a vector Erich Neuwirth dataframes with only one variable Ben Bolker gregexpr() - length of the matched text to a vector Gabor Grothendieck matching country name tables from different sources Petri Palmu gregexpr() - length of the matched text to a vector Jan Verbesselt Binary logistic modelling: setting conditions (defining thresholds) in the fitted model (lrm) a.menicacci@fr.fournierpharma.com Homogenic groups generation - Randomisation Petri Palmu gregexpr() - length of the matched text to a vector Bob Wheeler expected values of order statistics Leo Gürtler how to obtain "par(ask=TRUE)" with trellis-plots Martin Maechler Problem with making Matrix Roger Bivand matching country name tables from different sources Martin Maechler Improving R-Intro {was "Wikis etc."} Kare Edvardsen Space between axis label and tick labels Andrew Robinson Problem with making Matrix Pfaff, Bernhard Dr. Obtaining the adjusted r-square given the regression coef ficients SAULEAU Erik-André matching country name tables from different sources Martin Maechler Correct way to test for exact dimensions of matrix or array Brian Ripley matrix logic Uwe Ligges Obtaining the adjusted r-square given the regression coefficients Brian Ripley Problem with making Matrix

Tuesday, January 10, 2006 89 emails

Christian Schulz Thunderbird misrepresents manuals Uwe Ligges graphics: axis label Uwe Ligges reading contigency tables Uwe Ligges matrix logic Johannes Hüsing reading contigency tables Johannes Hüsing graphics: axis label ronggui Log-likelihood for Multinominal Probit Regression Model S.C. Wong Log-likelihood for Multinominal Probit Regression Model Vincent Deng Question about plotting a hclust tree Frank E Harrell Jr Odds Ratios in Logistic Regression with Effect Modifiers ronggui reading contigency tables Tom matrix logic Spencer Graves data order affects glmmPQL Andrew Robinson Problem with making Matrix Spencer Graves Selecting significant peaks in periodograms Alexandra R. M. de Almeida Obtaining the adjusted r-square given the regression coefficients Mark Leeds complex matrix manipulation question David Hinds hypothesis testing for rank-deficient linear models R User matrix logic Sundar Dorai-Raj Levelplot not working from file Bert Gunter Levelplot not working from file André Anderson Carvalho Odds Ratios in Logistic Regression with Effect Modifiers Matt Sakals Levelplot not working from file Naiara S. Pinto reading contigency tables Fredrik Lundgren "Missing value representation in Excel before - solved in a way- summary" Bert Gunter expected values of order statistics Bert Gunter Find last row (observation) for each combination of variables Anna Oganyan expected values of order statistics Leif Kirschenbaum Find last row (observation) for each combination of variables Deepayan Sarkar two y-axis in xy-plot Leif Kirschenbaum "Missing value representation in Excel before Douglas Bates Representation of lmer objects will change soon Gabor Grothendieck R CMD not recognized at command-line Gabor Grothendieck matching country name tables from different sources Tony Plate Correct way to test for exact dimensions of matrix or array Elizabeth Purdom R CMD not recognized at command-line Gabor Grothendieck Correct way to test for exact dimensions of matrix or array Gabor Grothendieck matching country name tables from different sources Andrew Gelman lmer(): nested and non-nested factors in logistic regression McGehee, Robert matching country name tables from different sources bogdan romocea matching country name tables from different sources Michael Kubovy Hmisc xYplot: two ablines? Werner Wernersen matching country name tables from different sources Dr Gregory Jefferis Correct way to test for exact dimensions of matrix or array David Reitter glmmPQL / "system is computationally singular" Andrew.McCallum@sf.frb.org R for Windows Proxy Solution Rogerio Porto Filters in waveslim Hadley Wickham Return a Vector of Positions allan miller Return a Vector of Positions Sean Davis Working with R in a multi-processor machine. Martin Morgan Working with R in a multi-processor machine. Aitor Mata Conde Working with R in a multi-processor machine. Gabor Grothendieck R newbie example code question Seth Falcon Working with R in a multi-processor machine. Elizabeth Lawson Filters in waveslim Martin Maechler R newbie example code question Gabor Grothendieck matching country name tables from different sources Peter Dalgaard another question about lmer, this time involving coef() Alexandra R. M. de Almeida Obtaining the adjusted r-square given the regression coefficients McGehee, Robert R newbie example code question Uwe Ligges (no subject) Michael Dewey Wikis etc. Andrew Gelman another question about lmer, this time involving coef() Werner Wernersen matching country name tables from different sources Michael Kubovy Hmisc xYplot: two ablines? Aitor Mata Conde Working with R in a multi-processor machine. paladini@rz.uni-potsdam.de (no subject) Martin Maechler Correct way to test for exact dimensions of matrix or array Dimitris Rizopoulos Correct way to test for exact dimensions of matrix or array Dr Gregory Jefferis Correct way to test for exact dimensions of matrix or array Fredrik Karlsson Repeated measures aov with post hoc tests? Martin Maechler R - Wikis and R-core Fredrik Lundgren "Missing value representation in Excel before extraction to R with RODBC" (Ted Harding) R newbie example code question Antje Schüle two y-axis in xy-plot Edzer Pebesma new gstat version (Ted Harding) R newbie example code question (Ted Harding) R newbie example code question Uwe Ligges exporting methods/classes Dimitris Rizopoulos extracting coefficients from lmer Jonathan Williams extracting coefficients from lmer Jean-Christophe BOUETTE exporting methods/classes Antje Schüle two y-axis in xy-plot Brian Ripley graphics pages? Uwe Ligges graphics pages? Tom data collection with R Erin Hodgess graphics pages? PIKAL Petr "Missing value representation in Excel before extraction to R with RODBC" Uwe Ligges automatic start of RWinEdt

Monday, January 9, 2006 59 emails

Uwe Ligges How to plot legend to the margin area of the graph? Achim Zeileis brown, durbin , evans ( 1975 ) Detlef Steuer wiki in Hamburg set read-only Vincent Deng How to plot legend to the margin area of the graph? ronggui automatic start of RWinEdt John wicked wikis for R John Wikis etc. Jack Tanner bug in either glmmPQL or lme/lmer Arin Basu StatsRus and wiki Mark Leeds brown, durbin , evans ( 1975 ) stefan semmelring automatic start of RWinEdt stefan semmelring <kein Betreff> Gabor Grothendieck Wikis etc. Doran, Harold warning message from nlme Luke Tierney repeat { readline() } John Sorkin R newbie example code question Nachiketa Sahoo product of multidimensional tables Mark Leeds R newbie example code question Jack Tanner Wikis etc. Uwe Ligges R newbie example code question Mark Leeds R newbie example code question David Forrest Wikis etc. Leif Kirschenbaum Wikis etc. Chia, Yen Lin warning message from nlme Chia, Yen Lin warning message from nlme Deepayan Sarkar two y-axis in xy-plot Fredrik Lundgren "Missing value representation in Excel before extraction to R with RODBC" vincent@7d4.com paste tab and print Henrik Bengtsson sudoku Gabor Grothendieck Wikis etc. Edzer Pebesma How to use filled.contour(x,y,z) data for levelplot(z)? Douglas Bates decide between polynomial vs ordered factor model (lme) Tom data aquistion cards Thomas Lumley Wikis etc. Rand, Hugh trouble with extraction/interpretation of variance structure para meters from a model built using gnls and varConstPower Tuszynski, Jaroslaw W. Looking for packages to do Feature Selection and Classifi cation Jim Lemon Question about graphics in R Tuszynski, Jaroslaw W. need palette of topographic colors similar to topo.colors () Dimitris Rizopoulos decide between polynomial vs ordered factor model (lme) Jan Verbesselt How to use filled.contour(x,y,z) data for levelplot(z)? ronggui how to run the data editor by command?Thanks! Frank E Harrell Jr wicked wikis for R 刘加成 how to run the data editor by command?Thanks! Leo Gürtler decide between polynomial vs ordered factor model (lme) roger bos sudoku R Heberto Ghezzo, Dr Suggestion for big files [was: Re: A comment about R:] Jean-Christophe BOUETTE wicked wikis for R Michael Dewey Wikis etc. Uwe Ligges A comment about R: Antje Schüle two y-axis in xy-plot justin bem repeat { readline() } PIKAL Petr How to restore workspace from .RDataTmp? David Ruau need palette of topographic colors similar to topo.colors() Helene Wagner How to restore workspace from .RDataTmp? Ales Ziberna How to unload a package or "undo" library("package") Martin Maechler sudoku Brian Ripley "Missing value representation in Excel before extraction to R with RODBC" Brian Ripley paste tab and print Brian Ripley How to unload a package or "undo" library("package")

Sunday, January 8, 2006 41 emails

PIKAL Petr "Missing value representation in Excel before extraction to R with RODBC" Uwe Ligges R-help Digest, Vol 35, Issue 7 vincent@7d4.com paste tab and print Kyosti H Kurikka R-help Digest, Vol 35, Issue 7 Ales Ziberna How to unload a package or "undo" library("package") PONSERO Alain (sans objet) Ales Ziberna Clustering and Rand Index - VS-KM Joseph LeBouton Ordering boxplot factors; thank you! François Pinard A comment about R: Mark Hempelmann Clustering and Rand Index - VS-KM David Forrest Wikis for R François Pinard Suggestion for big files [was: Re: A comment about R:] Henrik Bengtsson repeat { readline() } Douglas Bates lmer p-vales are sometimes too small Hadley Wickham Suggestion for big files [was: Re: A comment about R:] Gabor Grothendieck How to unload a package or "undo" library("package") Aleš Žiberna How to unload a package or "undo" library("package") Roger Bivand maptools, write.polylistShape zzz haha Finding R mailing list archives {was "Wikis etc."} Jack Tanner Wikis etc. Evgeniy Kachalin R-help Digest, Vol 35, Issue 7 François Pinard Suggestion for big files [was: Re: A comment about R:] Arin Basu wicked wikis for R Arin Basu wicked wikis for R Brian Ripley lmer error message François Pinard Suggestion for big files [was: Re: A comment about R:] Spencer Graves lmer error message Andrew Gelman lmer with nested/nonnested groupings? François Pinard Suggestion for big files [was: Re: A comment about R:] Douglas Bates lmer error message Philippe GROSJEAN Wikis etc. Uwe Ligges exporting methods/classes Uwe Ligges packages and tex files Nick Drew Wikis for R Amir Safari Filters in waveslim Kevin Gamble Wikis etc. Brian Ripley repeat { readline() } Detlef Steuer sudoku Detlef Steuer Wikis etc. Hadley Wickham repeat { readline() } Brian Ripley repeat { readline() }

Saturday, January 7, 2006 48 emails

Erin Hodgess exporting methods/classes Evgeniy Kachalin Mass 'identify' on 2d-plot ronggui Dates gynmeerut Dates Duncan Murdoch Question about graphics in R paul sorenson Wikis etc. Jim Lemon ylim problem in barplot Henrik Bengtsson repeat { readline() } Dirk Eddelbuettel sending methods to a new package Gabor Grothendieck sending methods to a new package Erin Hodgess sending methods to a new package Spencer Graves lmer error message Vitor Chagas Finding R mailing list archives {was "Wikis etc."} Brian Ripley Where is the stud.ci() function used in boot.ci()? Gabor Grothendieck Where is the stud.ci() function used in boot.ci()? Christopher R. Bilder Where is the stud.ci() function used in boot.ci()? Erin Hodgess packages and tex files Erin Hodgess (no subject) Roger Bivand need palette of topographic colors similar to topo.colors() bogdan romocea need palette of topographic colors similar to topo.colors() Jonathan Baron Wikis etc. Dirk Eddelbuettel Wikis etc. Dirk Eddelbuettel Wikis etc. Patrick Giraudoux maptools, write.polylistShape Martin Erwig Question about graphics in R Christian Hennig Clustering and Rand Index ronggui Installing Task Views Richard van Wingerden level sets of factors are different Gabor Grothendieck Wikis etc. Uwe Ligges Installing Task Views John Sorkin Wikis etc. Martin Maechler Finding R mailing list archives {was "Wikis etc."} Uwe Ligges Generating raster simulations Uwe Ligges Wikis etc. Uwe Ligges R-help Digest, Vol 35, Issue 7 John Sorkin Wikis etc. Jonathan Baron Wikis etc. John Sorkin Wikis etc. Steven K Friedman Generating raster simulations Duncan Murdoch Wikis etc. Gabor Grothendieck Wikis for R Evgeniy Kachalin R-help Digest, Vol 35, Issue 7 Frank E Harrell Jr Wikis for R Brian Ripley level sets of factors are different Mark Hempelmann Clustering and Rand Index Richard van Wingerden level sets of factors are different Patrick Giraudoux glmmPQL and variance structure Brian Ripley Daylight Savings Time unknown in R-2.2.1

Friday, January 6, 2006 63 emails

Takatsugu Kobayashi LOCFIT help Wensui Liu Suggestion for big files [was: Re: A comment about R:] paul sorenson Wikis etc. Mark Andersen Installing Task Views Brahm, David Daylight Savings Time unknown in R-2.2.1 Bert Gunter vectorization of groups of dot products Rossi, Peter E. vectorization of groups of dot products jukka ruohonen panel data unit root tests Brian Ripley ouml in an .Rd Liqiu Jiang Got it--Re:A question on summation of functions Paul Gilbert ouml in an .Rd DW installation question/problem Frank Duan Looking for packages to do Feature Selection and Classification Liqiu Jiang A question on summation of functions DW installation question/problem Fredrik Lundgren "Missing value representation in Excel before extraction to R with RODBC" Roger Bivand distribution maps bogdan romocea Using R in a production /real time windows environment Peter Dalgaard installation question/problem Roger Bivand How to visualise spatial raster data? justin bem Can R plot multicolor lines? Thomas Lumley Problem with Integral of Indicator Function Mark Leeds Using R in a production /real time windows environment DW installation question/problem Deepayan Sarkar help with strip.default Cal Stats Problem with Integral of Indicator Function Peter Dalgaard installation question/problem PIKAL Petr Can R plot multicolor lines? DW installation question/problem Paul DeBruicker Can R plot multicolor lines? PIKAL Petr A comment about R: Rogério Rosa da Silva distribution maps Jan Verbesselt How to visualise spatial raster data? ecoinfo Wikis etc. Bert Gunter help with strip.default Brahm, David sudoku Patrick Burns Multiplication Don MacQueen Wikis etc. Steven Lacey help with strip.default Tony Plate Wikis etc. Brian S Cade inverse prediction intervals for nonlinear least squares Olof Leimar lmer p-vales are sometimes too small Barry Rowlingson Multiplication Wensui Liu Suggestion for big files [was: Re: A comment about R:] Stefan Eichenberger A comment about R: Seth Falcon Wikis etc. Duncan Murdoch Wikis etc. Stefan Eichenberger A comment about R: Barry Rowlingson Wikis etc. John Marsland Wikis etc. John Marsland Wikis etc. Jonathan Baron Wikis etc. Spencer Graves Use Of makeARIMA Fernando Henrique Ferraz P. da Rosa Wikis etc. Arne.Muller@sanofi-aventis.com RMySQL/DBI John Marsland Wikis etc. Peter Dalgaard A comment about R -> Link to a technical report from ATS, UCLA Martin Maechler ylim problem in barplot Brian Ripley Suggestion for big files [was: Re: A comment about R:] Naji A comment about R -> Link to a technical report from ATS, UCLA Martin Maechler Suggestion for big files [was: Re: A comment about R:] Brian Ripley Ordering boxplot factors Brian Ripley Suggestion for big files [was: Re: A comment about R:]

Thursday, January 5, 2006 89 emails

Wednesday, January 4, 2006 115 emails

Tuesday, January 3, 2006 86 emails

Peter Ehlers silly, extracting the value of "C" from the results of somers2 ahimsa campos arceiz silly, extracting the value of "C" from the results of somers2 Marc Schwartz Questions about cbind Vincent Deng Questions about cbind Marc Schwartz newbie where to look question Spencer Graves unexpected "false convergence" Dirk Eddelbuettel newbie where to look question Mark Leeds newbie where to look question Frank Duan Looking for packages to do Feature Selection and Classification Cal Stats Indefinite Integral in R Mike Prager A comment about R: (sort.data.frame) Spencer Graves Glimmix and glm Doran, Harold Including random effects in logistic regression. Bob Green A comment about R: Marc Schwartz all possible combinations of list elements Eberhard F Morgenroth all possible combinations of list elements Waichler, Scott R Connectivity across a grid above a variable surface Jeffrey Ross-Ibarra abline in log-log plot Thomas Lumley All possible subsets model selection using AICc Matt Williamson All possible subsets model selection using AICc Elizabeth Lawson mixed effects models - negative binomial family? Thomas Lumley p-value of Logrank-Test Mark Leeds newbie R question Brian Ripley newbie R question Roger Bivand newbie R question Eric Kort newbie R question Peter Dalgaard newbie R question Mark Leeds newbie R question Verena Hoffmann p-value of Logrank-Test Liaw, Andy randomForest - classifier switch Stephen Choularton randomForest - classifier switch David Forrest A comment about R: Gabor Grothendieck A comment about R: roger bos A comment about R: Gabor Grothendieck For loop gets exponentially slower as dataset gets larger... Bert Gunter R fortunes candidate? (was "A comment about R") Thomas Lumley A comment about R: bogdan romocea For loop gets exponentially slower as dataset gets larger... Kort, Eric A comment about R: Patrick Burns A comment about R: Bert Gunter A comment about R: Peter Flom A comment about R: Ben Fairbank A comment about R: Wensui Liu A comment about R: Gabor Grothendieck Summary functions to dataframe Peter Muhlberger Bootstrap w/ Clustered Data Brian Ripley under (and over) dispersion in Poisson regression R User For loop gets exponentially slower as dataset gets larger... Peter Dalgaard A comment about R: JRG A comment about R: Mike Bock Summary functions to dataframe Duncan Murdoch How to set the size of a rgl window, par3d() ? billemont@cegetel.net cox model Mike White Unlink a directory with leading and trailing space Peter Dalgaard Package for multiple membership model? John Sorkin under (and over) dispersion in Poisson regression Thomas Lumley Package for multiple membership model? Shige Song Package for multiple membership model? bogdan romocea bookmarking a page inside r-project.org Thomas Lumley A comment about R: Patrick Burns A comment about R: begert How to set the size of a rgl window, par3d() ? Sean Davis how to work on multiple R objects?... Constantine Tsardounis how to work on multiple R objects?... Paul Gilbert KALMAN FILTER HELP Brian Perron Package for multiple membership model? Peter Flom A comment about R: Kare Edvardsen Labels exceed the plot area John Fox A comment about R: roger bos r: RODBC QUESTION Friedrich Leisch Bookmarking a page inside r-project.org bogdan romocea Q about RSQLite Pfaff, Bernhard Dr. Q about RSQLite Jason Marshal Including random effects in logistic regression. Sean Davis need to know some basic functionality features of R-Proj Sean Davis S3 vs. S4 Mohammed Asifulla - CTD , Chennai need to know some basic functionality features of R-Proj Gabor Grothendieck A comment about R: Matthias Kohl Extending a data frame with S4 Peter Flom A comment about R: Abderrahim Oulhaj lmer error message Philippe GROSJEAN A comment about R: Rau, Roland A comment about R: Hadley Wickham Extending a data frame with S4 Kjetil Halvorsen GLARMA Brian Ripley problem with dse package (was KALMAN FILTER HELP)

Monday, January 2, 2006 40 emails

Sunday, January 1, 2006 16 emails

Sumanta Basak Use Of makeARIMA Mikkel Grum "7:9, 12:14" in dataframe to c(7:9, 12:14) Stephen Alternative to ARIMA? Erin Hodgess S3 vs. S4 Darren Weber RODBC help Kort, Eric A comment about R: Darren Weber RODBC help Darren Weber RODBC help John Maindonald R] lme X lmer results Gabor Grothendieck S3 vs. S4 Marc Schwartz S3 vs. S4 Erin Hodgess S3 vs. S4 Spencer Graves glmmPQL and variance structure Jonathan Baron A comment about R: Kjetil Halvorsen A comment about R: Dieter Menne Forward reference in Sweave

Saturday, December 31, 2005 1 email

John Maindonald lme X lmer results

R-help January 2006