R-help - January 2014 - Date View

Friday, January 31, 2014 35 emails

Andrew Hoerner Problem connecting to database via RPostgreSQL/RS-DBI: "could not connect" error Duncan Murdoch Controlling visibility of top-level functions Jeff Johnson Controlling font size on code chunk outputs using Knitr Bert Gunter Controlling visibility of top-level functions Jeff Newmiller sapply returning list instead of matrix William Dunlap sapply returning list instead of matrix Paul A. Steckler Controlling visibility of top-level functions chris warth sapply returning list instead of matrix Bert Gunter sapply returning list instead of matrix denys Automatically naming subsets in a for loop chris warth sapply returning list instead of matrix jim holtman Automatically naming subsets in a for loop Jeff Newmiller Automatically naming subsets in a for loop Barry Rowlingson plotting points over a map using R denys Automatically naming subsets in a for loop arun Defining function help Duncan Murdoch Defining function help Duncan Murdoch Controlling visibility of top-level functions Paul A. Steckler Controlling visibility of top-level functions Mathew Nagendran Defining function help Zhang,Jun Problem relocating the R installation tree Zhang,Jun Problem relocating the R installation tree Ista Zahn plotting points over a map using R B. Longhurst Generalized Ordered Logit in R nelson Sibanda 2 phase coxian phase distribution Cristiano Varin Fit Negbin glm model with autoregressive correlation structure Simon Wood package mgcv - predict with bam: Error in X[ind, ] : subscript out of bounds Franckx Laurent use of "effects coding" in instrumental variables estimation Mohammed Ouassou plotting points over a map using R Kehl Dániel Error Help "only 0's may be mixed with negative subscripts" 李德磊 plotting points over a map using R Omphalodes Verna truncated cone / frustum in R rgl Agapitus Kato Error Help "only 0's may be mixed with negative subscripts" flavie.vial at vetsuisse.unibe.ch Fit Negbin glm model with autoregressive correlation structure Achim Zeileis Change points in R

Thursday, January 30, 2014 23 emails

neel shah How does R determine best value of alpha in forecasting Benjamin Ward (ENV) Change points in R Mohammad Nikzad error in assetsFit function of fPortfolio package David Winsemius print.matrix Doug Morrison reversed variables in stats::reshape() Jeff Johnson Controlling font size on code chunk outputs using Knitr Yihui Xie Controlling font size on code chunk outputs using Knitr Sebastián Daza glmmADMB error nooldor Universal regression program - multiple regressions on set of data Charles Raux mlogit: message "invalid 'row.names' length" after subsetting data B. Longhurst Generalized Ordered Logit in R William Dunlap mlogit: message "invalid 'row.names' length" after subsetting data Achim Zeileis Coeficiente Gini Charles Raux mlogit: message "invalid 'row.names' length" after subsetting data arun Parsing Complex Text in Single Cell Gastón Acosta c. Coeficiente Gini Nathan Uyttendaele Inconsistent results between first run of Rprof and next runs of Rprof Jeff Newmiller Controlling font size on code chunk outputs using Knitr Jeff Johnson Controlling font size on code chunk outputs using Knitr SPRINT Project SPRINT 1.0.5 release (parallelised R functions for complex analysis and large data sets) Göran Broström print.matrix Katharina May package mgcv - predict with bam: Error in X[ind, ] : subscript out of bounds Rui Barradas Parsing Complex Text in Single Cell

Wednesday, January 29, 2014 74 emails

Tuesday, January 28, 2014 60 emails

Andrew Hoerner Diagnostic and helper functions for defective & hard-to-import files Daniel Nordlund Difference between two datetimes johnhammondplease Convert txt file to time series and conduct trend and wavelet analyses David Winsemius Diagnostic and helper functions for defective & hard-to-import files Andrew Hoerner Diagnostic and helper functions for defective & hard-to-import files array chip median survival David Fox Difference between two datetimes David Winsemius Simplifying matrix computation Gabor Grothendieck Numeric Column Labels in Excel Function David Winsemius Survival analysis David Winsemius passing variable names to dplyr David Winsemius anova.coxph with subsets of data David Winsemius Survival analysis array chip unique rows Ross Boylan memory use of copies ce How do you install cran mac binaries ce How do you install cran mac binaries David Winsemius Numeric Column Labels in Excel Function Dennis Murphy passing variable names to dplyr David Winsemius passing variable names to dplyr Max Kuhn Predictor Importance in Random Forests and bootstrap Dimitri Liakhovitski Predictor Importance in Random Forests and bootstrap Bert Gunter unique rows arun unique rows array chip unique rows Baro Problem while plotting some plots arun Three values that add to the same number by 0.01 steps Bos, Roger passing variable names to dplyr - SOLVED Dennis Fisher Handling large SAS file in R array chip median survival Richard Kwock Three values that add to the same number by 0.01 steps Berend Hasselman Markov chain simulation Oscar Rueda anova.coxph with subsets of data WANG, YINDING Help for how to use "snowfall" package Rui Barradas Exporting aggregate summary Kaptue Tchuente, Armel Markov chain simulation Henrik Bengtsson How do you install cran mac binaries S Ellison Three values that add to the same number by 0.01 steps Marcus Nunes How do you install cran mac binaries arun Publication-ready figures in R? arun Three values that add to the same number by 0.01 steps Marc Schwartz Handling large SAS file in R S Ellison Publication-ready figures in R? John Kane Exporting aggregate summary ONKELINX, Thierry Publication-ready figures in R? Dennis Fisher Handling large SAS file in R Endy BlackEndy Survival analysis Laura Thomas Exporting aggregate summary Rainer M Krug Publication-ready figures in R? Vasco Cadavez augPred subsets PIKAL Petr ggplot different shapes and legend in one plot Calver, Rob The R Series from Chapman & Hall/CRC Kehl Dániel Markov chain simulation Dimitri Liakhovitski Predictor Importance in Random Forests and bootstrap PIKAL Petr augPred subsets Vasco Cadavez augPred subsets Bebber, Dan Publication-ready figures in R? ce How do you install cran mac binaries Duncan Murdoch Arguments in functions when packaging ONKELINX, Thierry Overlaying two graphs using ggplot2 in R

Monday, January 27, 2014 49 emails

Eva Prieto Castro Arguments in functions when packaging Armel KAPTUE Markov chain simulation Henrik Bengtsson How do you install cran mac binaries ce How do you install cran mac binaries arun Assigning a factor to a data frame suparna mitra problem in getVarianceStabilizedData TJUN KIAT TEO Assigning a factor to a data frame Munjal, Aarti John M. Chambers Statistical Software Award 2014 Duncan Mackay Overlaying two graphs using ggplot2 in R arun subset a data frame into multiple data frames Yihui Xie KnitR/RMarkdown: Is there a way to not print a section of the document? David Winsemius Overlaying two graphs using ggplot2 in R Duncan Mackay KnitR/RMarkdown: Is there a way to not print a section of the document? hendricks Use calc function to do RKT over raster stack Armel KAPTUE Error msg while trying to install package ncdf4 Luke Miller KnitR/RMarkdown: Is there a way to not print a section of the document? Jeff Johnson KnitR/RMarkdown: Is there a way to not print a section of the document? Bert Gunter Predictor Importance in Random Forests and bootstrap Dimitri Liakhovitski Predictor Importance in Random Forests and bootstrap jim holtman Numeric Column Labels in Excel Function Jim Lemon Problem in overlying two figures in ggplot2 arun Numeric Column Labels in Excel Function Dustin Fife Numeric Column Labels in Excel Function arun Numeric Column Labels in Excel Function Dustin Fife Numeric Column Labels in Excel Function Frank E Harrell Jr Handlig large SAS file in R Bos, Roger using substitute with multiple parameters Ista Zahn Problem in overlying two figures in ggplot2 Bert Gunter Bug or my misunderstanding? Bert Gunter Bug or my misunderstanding? Enrico R. Crema problem (un)detecting changepoints Kristi Glover Problem in overlying two figures in ggplot2 Enrico R. Crema problem (un)detecting changepoints Martyn Byng problem (un)detecting changepoints Carlo Giovanni Camarda Simplifying matrix computation Bos, Roger passing variable names to dplyr jim holtman Using apply function Joshua Ulrich testing if xts date exists ? Martin Morgan memory use of copies Bert Gunter Calculating group means Anoop Kumarkm Calculating group means Bert Gunter Calculating group means Anoop Kumarkm R and kerberos Yen Lee Using apply function Enrico R. Crema problem (un)detecting changepoints Highland Statistics Ltd Statistics courses monika nov Prediction Intervals predict.Arima Kristi Glover Overlaying two graphs using ggplot2 in R Jeff Newmiller problem in getVarianceStabilizedData

Sunday, January 26, 2014 13 emails

suparna mitra problem in getVarianceStabilizedData Bert Gunter How can I cluster a set of formulae? Duncan Mackay add median/mean line to stri-plot in lattice Professor George F.Hart How can I cluster a set of formulae? Rolf Turner ETAS-Error Sarah Goslee Ass. 3 part 8 - output is correct but submission fails David Winsemius Ass. 3 part 8 - output is correct but submission fails arun pair-wise computation of columns in a matrix Kathryn Lord pair-wise computation of columns in a matrix katerina stavrianaki ETAS-Error Rui Barradas Packaging - Function with dots as argument Eva Prieto Castro Packaging - Function with dots as argument Jeff Newmiller Not sure if I have the requirement right.

Saturday, January 25, 2014 28 emails

Friday, January 24, 2014 31 emails

umair durrani R 3.0.2 How to Split-Apply-Combine using various Columns arun reversed variables in stats::reshape() arun reversed variables in stats::reshape() Bert Gunter Regression on presence/absence matrix Rolf Turner Regression on presence/absence matrix Göran Broström My problem with R Greg Snow Regression on presence/absence matrix Marc Schwartz How to read this data correctly Rolf Turner My problem with R arun How to read this data correctly Rui Barradas How to read this data correctly Doug Morrison reversed variables in stats::reshape() Christofer Bogaso How to read this data correctly MacQueen, Don Help with importing scripts within the same package? Rui Barradas How to read this data correctly Christofer Bogaso How to read this data correctly arun Deleting subsequences from a string sequence chris warth readLines() behavior is really strange Ista Zahn keep track of variables created in each chapter of a knitr book Pablo Ignacio Escribano Pinto RSA and lmer Michael Friendly keep track of variables created in each chapter of a knitr book Duncan Mackay Biology package install error Brian Ripley Safe prediction does not work for bivariate polynomial terms? Daniel Patón Domínguez Regression on presence/absence matrix jim holtman complicated IF Søren Højsgaard degrees of freedom Peter Dalgaard subset and na.rm not really suppressing <NA> values Andreas Rybicki Problems with a R-packages PIKAL Petr My problem with R PIKAL Petr My problem with R Matt Sundquist Plotly Beta: Online Plotting with R

Thursday, January 23, 2014 44 emails

Bill complicated IF Jeff Newmiller Help with importing scripts within the same package? Charlie Xia Help with importing scripts within the same package? Jeff Newmiller Help with importing scripts within the same package? Charlie Xia Help with importing scripts within the same package? David Winsemius Biology package install error Xing Zhao Safe prediction does not work for bivariate polynomial terms? Duncan Murdoch Help with importing scripts within the same package? Ross Boylan memory use of copies Hervé Pagès counting matched elements in two vectors Peter Langfelder counting matched elements in two vectors Luis E. Vargas Comparing two HMMs to time series data using a Monte-Carlo method Charlie Xia Help with importing scripts within the same package? Hervé Pagès counting matched elements in two vectors Jeff Newmiller counting matched elements in two vectors Duncan Mackay add median/mean line to stri-plot in lattice Frank E Harrell Jr Major update to Hmisc package available on CRAN Allison Yoshida Biology package install error Ben Bolker degrees of freedom Mark Lyman R Installation Options arun Converting Matrix to List Marc Schwartz summary() and the mode Rolf Turner summary() and the mode Jim Lemon summary() and the mode Hervé Pagès Deleting subsequences from a string sequence Iain Gallagher degrees of freedom Luigi Marongiu add median/mean line to stri-plot in lattice Ruhil, Anirudh summary() and the mode arun Deleting subsequences from a string sequence Peter Löwenberg Question on density values obtained from kde2d() from package MASS arun counting matches in two vectors M.Bezabih at lse.ac.uk counting matches in two vectors Brian Ripley R Installation Options William Revelle Problems with a R-packages Akshay Chougule Determining appropriate order of Markov chain William Dunlap modify subset of array in list in a function arun Matching data in two files but returning a value from a adjacent column arun counting matches in two vectors Mark Lyman R Installation Options M.Bezabih at lse.ac.uk counting matched elements in two vectors Tamas Papp modify subset of array in list in a function Brian Ripley R-3.0.2 installation breaks up with error Claus.Neumayer at merckgroup.com R-3.0.2 installation breaks up with error Ilya Novikov direct AUC maximization in R

Wednesday, January 22, 2014 36 emails

Jeff Newmiller install ggplot2 arun unable to carry through object in a nested function Chen, George unable to carry through object in a nested function Chen, George unable to carry through object in a nested function Jeff Newmiller subset and na.rm not really suppressing <NA> values Jim Lemon ETAS-Help Jeff Johnson subset and na.rm not really suppressing <NA> values Bert Gunter xyplots in lattice - strange behaviour, possible bug? Don McKenzie xyplots in lattice - strange behaviour, possible bug? Bert Gunter xyplots in lattice - strange behaviour, possible bug? Kevin Wright Multiple corrgrams or joining jpg/png Manlio Calvi xyplots in lattice - strange behaviour, possible bug? Georg Hörmann Multiple corrgrams or joining jpg/png Dai, Jie install ggplot2 Matthew Henn geo_bar x= and y= warnings and error help Luigi Marongiu reduce space between factors groups in a graph Peter Dalgaard how to get the numbers of factors in a matrix Vincent Goulet New version of document on R programming - with videos [French] Simone Gabbriellini a problem with table() and duplicates jim holtman a problem with table() and duplicates Simone Gabbriellini a problem with table() and duplicates Grenier, Cecile (CIAT) Variance analysis William Dunlap how to get the numbers of factors in a matrix Andreas Rybicki Problems with a R-packages jim holtman complicated IF Bill complicated IF jim holtman complicated IF Michael Haenlein R in remote mode Aldi Kraja Setting up an R server. Bill complicated IF katerina stavrianaki ETAS-Help PIKAL Petr My problem with R Bill collapsing records Alaios Density or Boxplot with median and mean Jim Lemon Density or Boxplot with median and mean Alaios Density or Boxplot with median and mean

Tuesday, January 21, 2014 37 emails

PIKAL Petr how to get the numbers of factors in a matrix PIKAL Petr My problem with R Frede Aakmann Tøgersen Strange error on text assignment to variable Sumitrajit Dhar Strange error on text assignment to variable Brian Ripley Error in structure(ordered, dim = ns) : dims [product 1] do not match the length of object [0] Brian Ripley Windows7, R-Studio, can't find package rJava, toshiharu.saito at hushmail.com Porting Legacy R Code to Different Language Duncan Murdoch Getting the current number of rows in windows R gui console (Carlos Arias) Carlos Arias Getting the current number of rows in windows R gui console (Carlos Arias) John Sorkin Problems downloading and installing nlme under Linux Mint 15 Clint Bowman Problems downloading and installing nlme under Linux Mint 15 John Sorkin Problems downloading and installing nlme under Linux Mint 15 William Dunlap Error in structure(ordered, dim = ns) : dims [product 1] do not match the length of object [0] Andy.P PCA factominer package, question about changing labels in individuals factor map William Dunlap Error in structure(ordered, dim = ns) : dims [product 1] do not match the length of object [0] David L Carlson PCA factominer package, question about changing labels in individuals factor map John Fox repeated measures ANOVA using Anova in car library Bert Gunter how do I extract all possible combinations of rows from a column arun how do I extract all possible combinations of rows from a column Rainer K. SACHS Windows7, R-Studio, can't find package rJava, arun Error in structure(ordered, dim = ns) : dims [product 1] do not match the length of object [0] ylwgto obtain mean trait values by haplotype in haplo.stats package Peter Dalgaard how to get the numbers of factors in a matrix Lucy Rayner Strange gcfit output in R package Grofit Andy.P PCA factominer package, question about changing labels in individuals factor map Bert Gunter repeated measures ANOVA using Anova in car library John Kane how to replace <NA> values Rüdiger Wolf repeated measures ANOVA using Anova in car library Jeff Newmiller how to get the numbers of factors in a matrix 张以春 how to get the numbers of factors in a matrix 张以春 how to get the numbers of factors in a matrix David Winsemius lattice PIKAL Petr how to get the numbers of factors in a matrix PIKAL Petr My problem with R PIKAL Petr how to replace <NA> values Mariacarla Memeo (no subject) Liu, Jun Yi how to get the numbers of factors in a matrix

Monday, January 20, 2014 37 emails

Brian Ripley long vectors in R 3.0.x Said Filahi lattice 张以春 how to get the numbers of factors in a matrix km long vectors in R 3.0.x Daniel Nordlund Select 5 identical numbers kingsly how to replace <NA> values Lee Marine My problem with R Alaios Select 5 identical numbers John how to replace <NA> values William Revelle psych version 1.4.1 Jeff Newmiller Q: vcd - assocstats - scaling phi/phi max Terry Therneau Type III tests and Cox models Peter Dalgaard Type III tests and Cox models Göran Broström Type III tests and Cox models Said Filahi lattice ce Setting up an R server. David Winsemius Generating weights based on certain condition in the dataset Bert Gunter Select 5 identical numbers bdano22 Q: vcd - assocstats - scaling phi/phi max Hadley Wickham Type III tests and Cox models Peter Dalgaard Type III tests and Cox models jim holtman Select 5 identical numbers Terry Therneau Type III tests and Cox models Alaios Select 5 identical numbers R. Michael Weylandt Setting up an R server. arun how to replace <NA> values PIKAL Petr how to replace <NA> values John Sorkin Setting up an R server. Lorenzo Isella Reading SDMX Files in R John Sorkin how to replace <NA> values Rainer M Krug Grouping commands so that variablas are removed automatically - like functions Rainer M Krug "non-deletable" varibles like in packages but during runtime? jim holtman Grouping commands so that variablas are removed automatically - like functions Rainer M Krug Grouping commands so that variablas are removed automatically - like functions Cipollini Fabrizio TAQMNGR Michael Dewey changing font size in Forest plot code. Gerrit Draisma eliminating white space in lattice plot

Sunday, January 19, 2014 13 emails

Jim Lemon collapsing records Bill collapsing records Gerard Smits changing font size in Forest plot code. David Winsemius changing font size in Forest plot code. Sudhi Upadhyaya Generating weights based on certain condition in the dataset Gerard Smits changing font size in Forest plot code. David Winsemius Discussion board Kehl Dániel how to replace <NA> values kingsly how to replace <NA> values Duncan Murdoch Non-ACSII characters in R on Windows arun subset every 5th row Chrisee remove axes on barp from plotrix Jim Lemon remove axes on barp from plotrix

Saturday, January 18, 2014 28 emails

Brian Ripley lm(y ~ group/x ) + predict.lm(...,type="terms") F. Keshavarz Discussion board ce accessing an object with a variable ? arun accessing an object with a variable ? Xing Zhao lm(y ~ group/x ) + predict.lm(...,type="terms") Marius 't Hart accessing an object with a variable ? Marius 't Hart accessing an object with a variable ? Rolf Turner Estimating parameters of 3 parameters lognormal distribution ce accessing an object with a variable ? Chrisee remove axes on barp from plotrix Xing Zhao lm(y ~ group/x ) + predict.lm(...,type="terms") Xing Zhao lm(y ~ group/x ) + predict.lm(...,type="terms") nelsonsibbs78 2 phase coxian phase distribution Jeff Newmiller Generate Variable Length Strings from Various Sources Peter Dalgaard Estimating parameters of 3 parameters lognormal distribution William Dunlap shading and estimating area abetween two cdf curves Norman McBride Implementing a Formula into a Column of a Data Frame Joshua Ulrich xts error: number of items to replace is not a multiple of replacement length Christopher T Gregg *** caught segfault *** :: a common problem in 3.0.2 Vito Ricci Estimating parameters of 3 parameters lognormal distribution Bert Gunter For loop on column names Burhan ul haq Generate Variable Length Strings from Various Sources Erasmo Papagni MULTINOMIAL LOGIT WITH ENDOGENEITY Duncan Mackay eliminating white space in lattice plot Frede Aakmann Tøgersen For loop on column names Frede Aakmann Tøgersen *** caught segfault *** :: a common problem in 3.0.2 Brian Ripley Estimating parameters of 3 parameters lognormal distribution Frede Aakmann Tøgersen Estimating parameters of 3 parameters lognormal distribution

Friday, January 17, 2014 42 emails

Peter Maclean shading and estimating area abetween two cdf curves Bert Gunter Performing same steps on multiple dataframes using a loop - vijay arun Performing same steps on multiple dataframes using a loop - vijay David Winsemius Implementing a formula into a column of a data frame David Winsemius Predicting probabilities from a logistic regression by hand (in code) Vijay Performing same steps on multiple dataframes using a loop - vijay Duncan Mackay eliminating white space in lattice plot Kamil Bartoń Model averaging using QAICc Jeff Johnson For loop on column names Rolf Turner Estimating parameters of 3 parameters lognormal distribution Christopher T Gregg *** caught segfault *** :: a common problem in 3.0.2 Sarah Goslee Start-up functionalities bypassing Rprofile Christofer Bogaso Start-up functionalities bypassing Rprofile Jeff Johnson Any recommendations for reusable profiling of name fields? Hui Du R build a package Marc Schwartz barplot: segment-wise shading Lars Qviller Library splines arun eliminating white space in lattice plot Gerrit Draisma eliminating white space in lattice plot MacQueen, Don Implementing a Formula into a Column of a Data Frame arun calculate an value in dependence of another column COLLINL at pitt.edu Library splines Eliza Botto predefined area under the curve Christopher W. Ryan demonstrating R in introductory class using point-and-click software Norman McBride Implementing a Formula into a Column of a Data Frame Morway, Eric Inserting color into an irregular grid comprised of polygons Lorenz, David predefined area under the curve Brian Ripley Library splines Norman McBride Implementing a formula into a column of a data frame DonaldR706 at aol.com error message when I try to use help to look at html files Marc Schwartz Doubt in simple merge PIKAL Petr Doubt in simple merge Frede Aakmann Tøgersen Estimating parameters of 3 parameters lognormal distribution Christof peternell Library splines Vito Ricci Estimating parameters of 3 parameters lognormal distribution Frede Aakmann Tøgersen Estimating parameters of 3 parameters lognormal distribution Göran Broström Estimating parameters of 3 parameters lognormal distribution Mat calculate an value in dependence of another column Vasco Cadavez Non-linear models estimability Gerrit Eichner calculate an value in dependence of another column Ruben van eijk Multiple imputation, multinomial response & random effects Mat calculate an value in dependence of another column

Thursday, January 16, 2014 43 emails

Vito Ricci Estimating parameters of 3 parameters lognormal distribution Dario Strbenac Setting hetmap.2 Color Key Range Outside of Data Limits Daniel Cher tables package and alternative to col percent kingsly Doubt in simple merge Jeff Johnson Any recommendations for reusable profiling of name fields? Martin Weiser barplot: segment-wise shading erikpukinskis Predicting probabilities from a logistic regression by hand (in code) Jim Lemon barplot: segment-wise shading ce xts error: number of items to replace is not a multiple of replacement length arun xts error: number of items to replace is not a multiple of replacement length ce xts error: number of items to replace is not a multiple of replacement length Marc Schwartz barplot: segment-wise shading arun grepping with a variable trouble Martin Weiser barplot: segment-wise shading Göran Broström Estimating parameters of 3 parameters lognormal distribution Marc Schwartz barplot: segment-wise shading Sarah Goslee Object not Found Error on a .csv file Hae-Young Kim Question on adding a p-value in bwplot arun extracting rows from data frame that approximately equal another data frame Frank E Harrell Jr Regression Modeling Strategies 4-Day Short Course March 2013 arun names of columns arun names of columns Jim Lemon Inserting color into an irregular grid comprised of polygons Martin Weiser barplot: segment-wise shading Valerie Shalin Object not Found Error on a .csv file Morway, Eric Inserting color into an irregular grid comprised of polygons David Smith Revolutions blog: December roundup arun counts and percentage of multiple categorical columns in R arun counts and percentage of multiple categorical columns in R Vito Ricci Estimating parameters of 3 parameters lognormal distribution Marc Schwartz Doubt in simple merge ramoss DTM Package removeSparseTerms function question Frede Aakmann Tøgersen Doubt in simple merge Frede Aakmann Tøgersen Doubt in simple merge Adams, Jean Doubt in simple merge Duncan Murdoch ifelse... ONKELINX, Thierry ifelse... Tim Smith ifelse... Eliza Botto predefined area under the curve kingsly Doubt in simple merge Brian Ripley Subgroups definition with rpart arun Behavior of self-defined function within ddply Jérémy Lambert Subgroups definition with rpart

Wednesday, January 15, 2014 52 emails

Dennis Murphy demonstrating R in introductory class using point-and-click software David Winsemius Online profile validation period has expired today. nitin agarwal R-Query (fine-classing_Logistic Regression) Bert Gunter demonstrating R in introductory class using point-and-click software Ranjan Maitra demonstrating R in introductory class using point-and-click software Ista Zahn ggplot2: how to add new names to legend David Winsemius Regular expressions on filenames Julio Sergio Santana Curious behaviour of lapply and lists of functions Jeff Newmiller Regular expressions on filenames Julio Sergio Santana Curious behaviour of lapply and lists of functions arun Regular expressions on filenames jim holtman Regular expressions on filenames Wojtek Poppe Regular expressions on filenames Dennis Fisher Regular expressions on filenames Jeff Johnson Barplot not showing all labels arun Merge and specify column output order John Kane help Janet Choate Merge and specify column output order John Kane Barplot not showing all labels Brian Ripley rJava works on R-32bit but fails in R 64bit Collin Lynch rJava works on R-32bit but fails in R 64bit CIBC com Online profile validation period has expired today. Ben Bolker Model averaging using QAICc Rainer Schuermann Generate Variable Length Strings from Various Sources Amitabh Dugar Behavior of self-defined function within ddply arun Need some suggestions for outlier detection in a matrix Jeff Johnson Barplot not showing all labels arun Need some suggestions for outlier detection in a matrix arun Need some suggestions for outlier detection in a matrix Peter Dalgaard (no subject) arun Format Sys.time() Yuan, Rebecca How to get a substring from a string Yuan, Rebecca Format Sys.time() Mohammad Tanvir Ahamed Format Sys.time() arun How to get a substring from a string Thomas Lumley Weibull selfStart Henrik Bengtsson problem with Rstudio e X11 Burhan ul haq Generate Variable Length Strings from Various Sources PIKAL Petr Format Sys.time() PIKAL Petr How to get a substring from a string Yuan, Rebecca Format Sys.time() Vasco Cadavez Weibull selfStart Yuan, Rebecca How to get a substring from a string Mohammad Tanvir Ahamed How to get a substring from a string Vasco Cadavez Estimability of non-linear models Yuan, Rebecca How to get a substring from a string Ronaldo Reis Júnior problem with Rstudio e X11 Marc Schwartz Different output for lm Mac vs PC CASENHISER, DEVIN M Different output for lm Mac vs PC Tim Richter-Heitmann set new path for package installation, because In normalizePath(path.expand(path), winslash, mustWork) : Adel ESSAFI barchar or barp on multiple data Anna Zakrisson Braeunlich ggplot2: how to add new names to legend

Tuesday, January 14, 2014 41 emails

vikram ranga Assignment Week 1 PIKAL Petr Implement a Fomula arun Assignment Week 1 Koushik Saha Assignment Week 1 Diana Virkki Model averaging using QAICc Keniajin Wambui (no subject) Jeff Newmiller rJava works on R-32bit but fails in R 64bit David Winsemius R-help Digest, Vol 131, Issue 15 Ben Harrison Why is kmeans incredibly slow on this Ubuntu machine? Hui Du rJava works on R-32bit but fails in R 64bit Jeff Johnson Barplot not showing all labels Norman McBride Implement a Fomula Marc Schwartz Different output for lm Mac vs PC Adel ESSAFI barchar or barp on multiple data Duncan Mackay Different output for lm Mac vs PC Jeff Johnson Subsetting on multiple criteria (AND condition) in R Greg Snow Different output for lm Mac vs PC Rui Barradas R-help Digest, Vol 131, Issue 15 Dorcas Nduati Assignment Week 1 William Dunlap Subsetting on multiple criteria (AND condition) in R Marc Schwartz Different output for lm Mac vs PC John Kane Barplot not showing all labels Marc Schwartz Subsetting on multiple criteria (AND condition) in R arun Subsetting on multiple criteria (AND condition) in R John Kane barchar or barp on multiple data CASENHISER, DEVIN M Different output for lm Mac vs PC Jeff Johnson Subsetting on multiple criteria (AND condition) in R Vasco Cadavez R-help Digest, Vol 131, Issue 15 Adel ESSAFI barchar or barp on multiple data Bert Gunter about linear model in R Adelino Jose Chingore Juga Bivariate Binary model with conditional synchrony measures (CSM) and Odds Ratio andrews Nikolaiv Running multidimensional regressions Greg Snow Plot only a portion of a record Bert Gunter about linear model in R Adams, Jean About Assigning Missing Values Chia-Chieh Lin About Assigning Missing Values Silvano Problems with table Terry Therneau coxph with time-dependent covariates Solip Park about linear model in R Achim Zeileis How fast is the JSS reviewing process? Christophe Genolini How fast is the JSS reviewing process?

Monday, January 13, 2014 32 emails

David Winsemius Running multidimensional regressions Tsjerk Wassenaar "squashed" domains when doing PCA with bio3d Bianca Ihrig "squashed" domains when doing PCA with bio3d Ben Bolker likelihood ratio test for mean difference assuming unequal variance arun Plot only a portion of a record David Winsemius Plot only a portion of a record Jim Lemon Plot only a portion of a record Janet Choate Plot only a portion of a record andrews Nikolaiv Running multidimensional regressions William Dunlap Barplot not showing all labels David Winsemius How to use ddply Peter Dalgaard SE for R-squared arun How to use ddply Amanda Li likelihood ratio test for mean difference assuming unequal variance David Winsemius coxph with time-dependent covariates Jim Lemon Barplot not showing all labels Amitabh Dugar How to use ddply John Fox tcltk makes R crash under Mavericks Jeff Johnson Barplot not showing all labels Berend Hasselman tcltk makes R crash under Mavericks Claudia Tebaldi tcltk makes R crash under Mavericks Berend Hasselman tcltk makes R crash under Mavericks Phil Stevenson coxph with time-dependent covariates Claudia Tebaldi tcltk makes R crash under Mavericks arun HOW TO CREATE A SUBSET FROM A LARGE DATASET based on some conditions arun R riddle garth Re. Confidence intervals for prediction with R2Bayesx Hadley Wickham Find the package of a class given classname Hock Ann Lim To modify FMCD Duncan Murdoch tables package and alternative to col percent PIKAL Petr computation Lisa computation

Sunday, January 12, 2014 29 emails

Dimitris Rizopoulos package JMbayes -- version 0.5-0 PIKAL Petr Time Series STL IZHAK shabsogh computation David Winsemius How to convert .dot file to gml file in R vasanthi P How to convert .dot file to gml file in R Daniel Cher tables package and alternative to col percent michael curran how to change the color of the regression line when using effect function Jim Lemon adding legend to choropleth map using GISTools Ista Zahn how to change the color of the regression line when using effect function karine heerah how to change the color of the regression line when using effect function David Winsemius how to change the color of the regression line when using effect function karine heerah how to change the color of the regression line when using effect function arun use grep in lists and vectors Jim Lemon adding legend to choropleth map using GISTools Hermann Norpois use grep in lists and vectors Martha Zorn adding legend to choropleth map using GISTools Rui Barradas convert a vector to a symmetric matrix with all 0 on the diagonal David Winsemius Is this a bug or am I making a mistake? John C Frain SE for R-squared arun Nested for loop help please. Stageexp ggplot2 axis label German formatting Ista Zahn ggplot2 axis label German formatting William Dunlap Is this a bug or am I making a mistake? (Ted Harding) How to subscribe this mailing list Rui Barradas How to subscribe this mailing list Stageexp ggplot2 axis label German formatting gj1989lh How to subscribe this mailing list paidipati uthej How to plot contours for joint density of 2 independently distributed r.v.? Patrick Connolly Is this a bug or am I making a mistake?

Saturday, January 11, 2014 19 emails

Andrew Hoerner RSQLite: Tracking an error message to its source David Winsemius SE for R-squared arun Nested for loop help please. Jim Lemon Levelplots with non-continuous x-axis breaks Jim Lemon Problem with barplot William Dunlap Nested for loop help please. Peter Dalgaard Exact logistic regression, data frame issue Rui Barradas Nested for loop help please. arun Concatenating rows of a column vector Brian Ripley How to show Vignettes download link on CRAN package page Mathew Nagendran Nested for loop help please. Razi Zaidi Exact logistic regression, data frame issue Hai Qian How to show Vignettes download link on CRAN package page Yuan Luo Find the package of a class given classname arun Importing data into R arun Find the maximum value of a column in a matrix Enrico Schumann Selecting individuals to maximize the correlation of two variables arun looping through 3D array Marc Girondot Problem with barplot

Friday, January 10, 2014 48 emails

Thursday, January 9, 2014 46 emails

Koushik Saha locate pattern in matrix email GA optimization in two dimensions Long Vo using lapply to get function values email locate pattern in matrix arun subsetting 3D array Bert Gunter subsetting 3D array arun subsetting 3D array Duncan Mackay Function inside Sweave Pavel Krivitsky with() and within() functions inside lapply() not seeing outside of its environment? Bert Gunter convert real valued matrix to binary matrix arun looping through 3D array Rolf Turner Numerical solution David Winsemius transmission of parameters to the glmmadmb function arun looping through 3D array email convert real valued matrix to binary matrix Henrik Bengtsson Unable to Install a package from source in Windows Michael Friendly recoding table dimensions interactively Henrik Bengtsson Unable to Install a package from source in Windows Sarah Goslee Having a problem with labels Rui Barradas Having a problem with labels Jeff Johnson Having a problem with labels Greg Snow Numerical solution Greg Snow Best practices for loading large datasets into R arun Error in t.test Ravi Varadhan Unable to Install a package from source in Windows Terry Therneau tt() function (was "Package dependencies in building R packages") MacQueen, Don Implementing A Formula Hadley Wickham recoding table dimensions interactively William Dunlap recoding table dimensions interactively arun Replace value in a matrix according to a list with a list of value . Michael Friendly recoding table dimensions interactively Eric Elguero transmission of parameters to the glmmadmb function arun Replace value in a matrix according to a list with a list of value . Duncan Murdoch Replace value in a matrix according to a list with a list of value . Mohammad Tanvir Ahamed Replace value in a matrix according to a list with a list of value . Pachapep Levelplots with non-continuous x-axis breaks Maria Helena Mourino Silva Nunes Standardised Pearson residuals Patrick Burns DanteR problems Adams, Jean Levelplots with non-continuous x-axis breaks Assa Yeroslaviz DanteR problems Patrick Burns DanteR problems Margherita Di Leo Call for papers: Geospatial Semantic Array Programming Assa Yeroslaviz DanteR problems Rainer M Krug reinstall all packages - easy way? Wollschlaeger, Daniel Linear relative rate / excess relative risk models Rainer M Krug reinstall all packages - easy way?

Wednesday, January 8, 2014 39 emails

Alvaro Different colours for LatticeExtra graphs Jeff Newmiller Installation folder Aurélien Philippot Numerical solution David Winsemius Linear relative rate / excess relative risk models Duncan Mackay Function inside Sweave arun How to detect a sequence of NA values? array chip Installation folder array chip Different colours for LatticeExtra graphs array chip Different colours for LatticeExtra graphs Pachapep Levelplots with non-continuous x-axis breaks James Mahon Best practices for loading large datasets into R Adams, Jean Levelplots with non-continuous x-axis breaks Wollschlaeger, Daniel Linear relative rate / excess relative risk models Pachapep Levelplots with non-continuous x-axis breaks Richard Kwock How to detect a sequence of NA values? arun How to detect a sequence of NA values? Philippe GROSJEAN bug in rle? Silvano Function inside Sweave David Winsemius Linear relative rate / excess relative risk models MacQueen, Don Removing unused parameter in qqplot Richard Kwock How to detect a sequence of NA values? Duncan Murdoch How to include (source) R script in other scripts Bert Gunter bug in rle? William Dunlap bug in rle? Bert Gunter bug in rle? Brian Ripley bug in rle? Olivereta Converting list with different vector lengths into a dataframe (or export it as .csv) Olivereta Converting list with different vector lengths into a dataframe (or export it as .csv) arun Converting list with different vector lengths into a dataframe (or export it as .csv) arun Converting list with different vector lengths into a dataframe (or export it as .csv) Baro How to include (source) R script in other scripts Bert Gunter bug in rle? arun Patterns on postal codes Olivereta Converting list with different vector lengths into a dataframe (or export it as .csv) Wollschlaeger, Daniel Linear relative rate / excess relative risk models Michael Dewey about R Karl Ropkins How do I perform conditional annotation of lattice zuba Strange behaviour of `dlm` package Jeff Newmiller Patterns on postal codes

Tuesday, January 7, 2014 48 emails

Camilo Mora Raster in parallel computing? Frede Aakmann Tøgersen Patterns on postal codes Alvaro Different colours for LatticeExtra graphs Frede Aakmann Tøgersen Implementing A Formula arun How to detect a sequence of NA values? Rolf Turner Dataset to single column matrix Duncan Mackay How do I perform conditional annotation of lattice panel plots? Ista Zahn Dataset to single column matrix Pete Brecknock Dataset to single column matrix Adams, Jean Levelplots with non-continuous x-axis breaks Jeff Johnson Patterns on postal codes arun Dataset to single column matrix Greg Snow about R Norman McBride Implementing A Formula Duncan Murdoch A calculation in data.frame arun A calculation in data.frame sevda datlı about R Duncan Murdoch Packaging: Doubt in relation with "R CMD Rd2pdf packagename" Eva Prieto Castro Packaging: Doubt in relation with "R CMD Rd2pdf packagename" Ron Michael A calculation in data.frame Adams, Jean Levelplots with non-continuous x-axis breaks Eva Prieto Castro Packaging: Doubt in relation with "R CMD Rd2pdf packagename" Peter Dalgaard with() and within() functions inside lapply() not seeing outside of its environment? Keith S Weintraub How to "apply" correctly. Patrick Burns How to "apply" correctly. Duncan Murdoch with() and within() functions inside lapply() not seeing outside of its environment? Richard M. Heiberger Packaging: Doubt in relation with "R CMD Rd2pdf packagename" Eva Prieto Castro Packaging: Doubt in relation with "R CMD Rd2pdf packagename" Keith S Weintraub How to "apply" correctly. Grünenfelder Corina Question regarding the package rugarch Ken Knoblauch How do I perform conditional annotation of lattice panel plots? PIKAL Petr help Baro NAs introduced by coercion warning, while plotting data PIKAL Petr NAs introduced by coercion warning, while plotting data Pavel Krivitsky with() and within() functions inside lapply() not seeing outside of its environment? jim holtman NAs introduced by coercion warning, while plotting data Baro NAs introduced by coercion warning, while plotting data javad bayat help Dániel Kehl NAs introduced by coercion warning, while plotting data Baro NAs introduced by coercion warning, while plotting data jim holtman NAs introduced by coercion warning, while plotting data Baro NAs introduced by coercion warning, while plotting data PIKAL Petr NAs introduced by coercion warning, while plotting data Baro NAs introduced by coercion warning, while plotting data Chen, George How do I perform conditional annotation of lattice panel plots? Frede Aakmann Tøgersen help Jie Tang how to plot the spectrum by log-log axis PIKAL Petr help

Monday, January 6, 2014 35 emails

Jie Tang how to plot the spectrum by log-log axis Jie Tang how to plot the spectrum by log-log axis Ista Zahn Removing unused parameter in qqplot Richard M. Heiberger Packaging: Doubt in relation with "R CMD Rd2pdf packagename" Pachapep Levelplots with non-continuous x-axis breaks Peter Maclean Removing unused parameter in qqplot Eva Prieto Castro Packaging: Doubt in relation with "R CMD Rd2pdf packagename" William Dunlap Is this a bug or am I making a mistake? Walter Anderson Is this a bug or am I making a mistake? Rajaraman V time series has no or less than 2 periods Dennis Fisher Encoding issue Rajaraman V time series has no or less than 2 periods Sarah Goslee Is this a bug or am I making a mistake? Walter Anderson Is this a bug or am I making a mistake? William Dunlap Signif. codes Sarah Goslee OT: regex golf Weijia Wang R ggplot vertical and horizontal line intercept at center vikram ranga replace "" to NA. PIKAL Petr help arun replace "" to NA. Hin-Tak Leung The URL for the replacement dll/so bundle - Re: 2 bugs in R's grDevices, and fixes. Hin-Tak Leung 2 bugs in R's grDevices, and fixes. javad bayat help 王筱琪 Signif. codes jim holtman replace "" to NA. Marc Schwartz replace "" to NA. David Winsemius R compatible with Office 2013 Katherine Gobin Reversing the Equation to find value of variable Berend Hasselman Reversing the Equation to find value of variable Frede Aakmann Tøgersen Reversing the Equation to find value of variable vikram ranga replace "" to NA. Katherine Gobin Reversing the Equation to find value of variable Sarah King R compatible with Office 2013 zhu yao p value of trends for odds ratios (or hazard ratios) Levent TERLEMEZ fancyRpartPlot and the title at the bottom of the plot....

Sunday, January 5, 2014 26 emails

PIKAL Petr help javad bayat help javad bayat help arun For Loop Help Duncan Murdoch For Loop Help dattel_palme [via R] delicate problem with permutation test and raster images David Winsemius help Mathew Nagendran For Loop Help Rui Barradas help Bert Gunter help Martin Morgan Error in dispersionPlot using cummeRbund David Winsemius very basic series correlation question Bert Gunter very basic series correlation question David Winsemius Extract part of string Robert Baer very basic series correlation question David Winsemius Extract part of string arun Extract part of string Yanxiang Shi Error in dispersionPlot using cummeRbund Yanxiang Shi Error in dispersionPlot using cummeRbund arun How to get the row index numbers in a matrix Hadley Wickham RSQLite: Tracking an error message to its source Michael Friendly p value of trends for odds ratios (or hazard ratios) Hadley Wickham RSQLite: Tracking an error message to its source javad bayat help Thyago Moraes Optimal Match - Matchit Ron Michael Extract part of string

Saturday, January 4, 2014 21 emails

Jeff Newmiller RSQLite: Tracking an error message to its source Yihui Xie robust definition of \code{} for a knitr-produced document Andrew Hoerner RSQLite: Tracking an error message to its source David Winsemius change the reference level in plot(summary(cph-fit)) zhu yao change the reference level in plot(summary(cph-fit)) Peter Turner very basic series correlation question Ista Zahn RSQLite: Tracking an error message to its source zhu yao p value of trends for odds ratios (or hazard ratios) Andrew Hoerner RSQLite: Tracking an error message to its source Peter Dalgaard p value of trends for odds ratios (or hazard ratios) Benjamin Telkamp APA two-way bar-chart Ben Smit CAPER pgls() anova not working with variable as factor Dr. Thomas W. MacFarland APA two-way bar-chart Ben Bolker zero-inflated negative binomial model with random effects Milan Bouchet-Valat R crashes with memory errors on a 256GB machine (and system shoes only 60GB usage) Santiago Guallar zero-inflated negative binomial model with random effects Peter Dalgaard p value of trends for odds ratios (or hazard ratios) Uwe Ligges p value of trends for odds ratios (or hazard ratios) Benjamin Telkamp APA two-way bar-chart Jim Lemon APA two-way bar-chart Andrew Hoerner RSQLite: Tracking an error message to its source

Friday, January 3, 2014 26 emails

Thursday, January 2, 2014 44 emails

David Winsemius A question in rms package Richard M. Heiberger Any R-package geared towards Endorsement Frequencies? (Ted Harding) Tracking what R actually executes Hervé Pagès Subsetting vector with preserved order arun Subsetting vector with preserved order Duncan Murdoch Help with {tables} package Duncan Murdoch Tracking what R actually executes Dennis Fisher Tracking what R actually executes arun How to verify char variables contain at least one value Lars Bishop Help with {tables} package Milan Bouchet-Valat R crashes with memory errors on a 256GB machine (and system shoes only 60GB usage) arun looping function through list Arne Henningsen Discrete-continuous equation system in R Gerrit Eichner How to verify char variables contain at least one value Max Kuhn R crashes with memory errors on a 256GB machine (and system shoes only 60GB usage) Ben Bolker R crashes with memory errors on a 256GB machine (and system shoes only 60GB usage) arun looping function through list arun looping function through list arun For loop for frequency counting Agony A question in rms package Ista Zahn Any R-package geared towards Endorsement Frequencies? Lila Lorne Any R-package geared towards Endorsement Frequencies? Göran Broström seq_len and loops arun Create a unique group id Norbi Gurracho Create a unique group id Ista Zahn Any R-package geared towards Endorsement Frequencies? arun Create a unique group id arun compare two rows in same column in data farme raz compare two rows in same column in data farme Lila Lorne Any R-package geared towards Endorsement Frequencies? arun How to remove rows in a matrix having 0 as value in columns per condition arun Create a unique group id PIKAL Petr Create a unique group id Reinhard Hössinger Discrete-continuous equation system in R Peter Dalgaard Where did lost variables go, with example Gabor Grothendieck Data parsing question: adding characters within a string of characters Vivek Das How to remove rows in a matrix having 0 as value in columns per condition Duncan Murdoch Data parsing question: adding characters within a string of characters Norbi Gurracho Create a unique group id Frede Aakmann Tøgersen Data parsing question: adding characters within a string of characters PIKAL Petr Where did lost variables go, with example Luca Meyer How to verify char variables contain at least one value John Basic misunderstanding, or problem with my installation? John Where did lost variables go

Wednesday, January 1, 2014 22 emails

Gerrit Eichner How to verify char variables contain at least one value Jim Lemon How to verify char variables contain at least one value Xebar Saram R crashes with memory errors on a 256GB machine (and system shoes only 60GB usage) Luca Meyer How to verify char variables contain at least one value Joshua Banta Data parsing question: adding characters within a string of characters Bert Gunter Question: reproducibility of random sampling with replacement Jeff Newmiller Question: reproducibility of random sampling with replacement Rui Barradas Question: reproducibility of random sampling with replacement Rolf Turner Question: reproducibility of random sampling with replacement Chee Chen Question: reproducibility of random sampling with replacement arun looping through columns in a matrix or data frame William Dunlap seq_len and loops arun to modify a dataframe Rui Barradas to modify a dataframe Bert Gunter to modify a dataframe Arnaud Michel to modify a dataframe arun expression in xlab for a plot arun expression in xlab for a plot Andras Farkas expression in xlab for a plot Frank E Harrell Jr howto join matrices produced by rcorr() Barry Rowlingson Basic misunderstanding, or problem with my installation? Helena Baptista mgcv - markeov random field option

Tuesday, December 31, 2013 6 emails

Nordlund, Dan (DSHS/RDA) Basic misunderstanding, or problem with my installation? Göran Broström seq_len and loops Göran Broström cumulative incidence for mstate in Survival package in R Jim Lemon Working with Date Christofer Bogaso Working with Date Takatsugu Kobayashi Request for help regarding RWeka

R-help January 2014