R-help - July 2014 - Date View

Thursday, July 31, 2014 40 emails

Jeff Newmiller Rmixmod Memory Leak arun how to extract word before /// in a data frame contain many thousands rows. rsnell at xplornet.com hist3D (output control) Stephen HK Wong how to extract word before /// in a data frame contain many thousands rows. Spencer Graves Working with the Animation package in R Keith S Weintraub XLConnect on Linux Mint Maya William Dunlap Multiple plots and postscripts using split function Javier Guillen Configuring Rserve for remote access on Windows Server Jeff Newmiller Multiple plots and postscripts using split function Ista Zahn XLConnect on Linux Mint Maya Greg Snow interactive labeling/highlighting on multiple xy scatter plots Don McKenzie Multiple plots and postscripts using split function David L Carlson Multiple plots and postscripts using split function Ben Sully Writing to gzcon with rawConnection Yihui Xie a knitr question David Winsemius keep information on the number of warnings Luis Borda de Agua keep information on the number of warnings Shi, Tao interactive labeling/highlighting on multiple xy scatter plots John Kane Eager To Learn And Contribute! Arnaud Gaboury Regex - subsetting parts of a file name. John Kane Need(?) way to create a "picture" (or "plot") of a data.frame Sarah Goslee Regex - subsetting parts of a file name. S Ellison Regex - subsetting parts of a file name. arun Regex - subsetting parts of a file name. David Winsemius Need(?) way to create a "picture" (or "plot") of a data.frame fd Multiple plots and postscripts using split function Charles Determan Jr simulation dichotomous data John McKown Need(?) way to create a "picture" (or "plot") of a data.frame Keith S Weintraub XLConnect on Linux Mint Maya Marc Schwartz separate numbers from chars in a string Duncan Murdoch Need(?) way to create a "picture" (or "plot") of a data.frame Jim Lemon Need(?) way to create a "picture" (or "plot") of a data.frame Duncan Murdoch Need(?) way to create a "picture" (or "plot") of a data.frame John McKown Need(?) way to create a "picture" (or "plot") of a data.frame Duncan Murdoch a knitr question Ista Zahn a knitr question Graham Williams fancyRpartPlot and the title at the bottom of the plot.... Rolf Turner a knitr question Arnaud Gaboury Regex - subsetting parts of a file name. Uwe Ligges separate numbers from chars in a string

Wednesday, July 30, 2014 60 emails

Tuesday, July 29, 2014 37 emails

Fix Ace venn.diagram, error message: Incorrect number of elements Richard M. Heiberger a knitr question Erin Hodgess a knitr question Yihui Xie a knitr question 张天添 Out of example forecasting plot Peter Alspach a knitr question Erin Hodgess a knitr question Erin Hodgess a knitr question Shanae Clarke Help with splitting up values in a data set Sarah Goslee Help with splitting up values in a data set David L Carlson Post hoc comparissons Rolf Turner analyzing qualitative data sets Shi, Tao interactive labeling/highlighting on multiple xy scatter plots Sarah Goslee venn.diagram, error message: Incorrect number of elements Reid, Doug (MNR) Post hoc comparissons Ista Zahn XLConnect on Linux Mint Maya Gayon Clarke Help with splitting up values in a data set Sun Shine analyzing qualitative data sets Sun Shine analyzing qualitative data sets Reed Spool Dependency Injection & Inversion of Control for Data Bert Gunter Dependency Injection & Inversion of Control for Data Jeff Newmiller Dependency Injection & Inversion of Control for Data William Dunlap Dependency Injection & Inversion of Control for Data Jeff Newmiller XLConnect on Linux Mint Maya Paul Bernal Trouble with function nnetar Reed Spool Dependency Injection & Inversion of Control for Data Richard M. Heiberger analyzing qualitative data sets Dave Leighton Copulas and spatial modeling Keith S Weintraub XLConnect on Linux Mint Maya Fix Ace venn.diagram, error message: Incorrect number of elements Ramnath Vaidyanathan interactive labeling/highlighting on multiple xy scatter plots Greg Snow interactive labeling/highlighting on multiple xy scatter plots Bert Gunter analyzing qualitative data sets Rich Shepard analyzing qualitative data sets Sun Shine analyzing qualitative data sets Wollschlaeger, Daniel Linear relative rate / excess relative risk models ottorino Is dataset "headsize" from MVA or HSAUR2 packages missing or am I missing something ?

Monday, July 28, 2014 28 emails

PIKAL Petr outputting R loop to a csv file David L Carlson outputting R loop to a csv file Vishal Chari Error in validObject(.Object) : while running rqpd package Jenny Jiang outputting R loop to a csv file Shi, Tao interactive labeling/highlighting on multiple xy scatter plots Duncan Mackay lattice, latticeExtra: Adding moving averages to double y plot Jeff Newmiller using foumula to calculate a column in dataframe Jeff Newmiller using foumula to calculate a column in dataframe Worthington, Thomas A Split PVClust plot Ferra Xu rgl.postscript doesn't show the colors correctly Michael Sumner Calculate depth from regular xyz grid for any coordinate within the grid MacQueen, Don Calculate depth from regular xyz grid for any coordinate within the grid Matthew working on a data frame Sarah Goslee lattice, latticeExtra: Adding moving averages to double y plot Duncan Mackay lattice, latticeExtra: Adding moving averages to double y plot Jeff Newmiller Function assignment ottorino Is dataset "headsize" from MVA or HSAUR2 packages missing or am I missing something ? Sarah Goslee Calculate depth from regular xyz grid for any coordinate within the grid Kulupp Calculate depth from regular xyz grid for any coordinate within the grid Joshua Wiley Is there a package for EFA with multiple groups? Pavneet Arora using foumula to calculate a column in dataframe Peter Dalgaard Differencing between 2 previous values Pavneet Arora Differencing between 2 previous values PIKAL Petr Differencing between 2 previous values Pavneet Arora Differencing between 2 previous values Florian Ryan Function assignment Frank S. Determine all specific same dates between two given dates Pierre Lindenbaum R and external C library " cannot open shared object file" while LD_LIBRARY_PATH is set

Sunday, July 27, 2014 28 emails

Saturday, July 26, 2014 17 emails

rsherry8 Using R to Compute Covariance Peter Dalgaard Function assignment David Winsemius Using R to Compute Covariance Peter Dalgaard Using R to Compute Covariance MacQueen, Don Function assignment rsherry8 Using R to Compute Covariance Jeff Newmiller Redefining reference class makes persistent object partly unreadable John McKown R and external C library " cannot open shared object file" while LD_LIBRARY_PATH is set Jeff Newmiller Function assignment John McKown R and external C library " cannot open shared object file" while LD_LIBRARY_PATH is set Uwe Ligges Determine all specific same dates between two given dates Uwe Ligges Need help in finding ppval function and xirr function of matlab in R Florian Ryan Function assignment Arnaud Michel Plotrix and twoord.plot with date on x-axe Arnaud Michel Plotrix and twoord.plot with date on x-axe Jim Lemon Plotrix and twoord.plot with date on x-axe Arnaud Michel Plotrix and twoord.plot with date on x-axe

Friday, July 25, 2014 27 emails

Ross Boylan Redefining reference class makes persistent object partly unreadable David L Carlson Turn Rank Ordering Into Numerical Scores By Transposing A Data Frame MacQueen, Don Converting Lat Lon data in coordinates in R Simon Kiss Turn Rank Ordering Into Numerical Scores By Transposing A Data Frame Bruce.W Morlan Reproducibility issue in gbm (32 vs 64 bit) Marc Schwartz SASxport function read.xport gives error "object 'w' not found" William Dunlap working on a data frame Matthew working on a data frame garrett honke Multiple imputation, multinomial response & random effects Frank S. Determine all specific same dates between two given dates Pierre Lindenbaum R and external C library " cannot open shared object file" while LD_LIBRARY_PATH is set John McKown Problem using ggplot2 with the legend of a stacked bar chart PIKAL Petr R function returning a list of variable(s) conditional on the value of an option? David McPearson R function returning a list of variable(s) conditional on the value of an option? Jocelyn Ireson-Paine SASxport function read.xport gives error "object 'w' not found" Sowmya Rudregowda Need help in finding ppval function and xirr function of matlab in R John McKown Problem using ggplot2 with the legend of a stacked bar chart marcel Austenfeld Set Conditional Breakpoint with setBreakpoint Function carol white selection of probes, probesets mapping to the same gene Luke Hartigan R function returning a list of variable(s) conditional on the value of an option? Duncan Murdoch Set Conditional Breakpoint with setBreakpoint Function Christian Hennig clustering with hclust marcel Austenfeld Set Conditional Breakpoint with setBreakpoint Function Ayushi Pandey svm implementation using RTextTools Julien Million Retrieve Axis coordinates from map Marianna Bolognesi clustering with hclust Jeff Newmiller Converting Lat Lon data in coordinates in R

Thursday, July 24, 2014 40 emails

suparna mitra Converting Lat Lon data in coordinates in R Ahmed Nagi Prooblem using RMpi on OSX moutain lion Peter Alspach working on a data frame kw1958 XLConnect on Linux Mint Maya John McKown XLConnect on Linux Mint Maya Matthew working on a data frame Keith S Weintraub XLConnect on Linux Mint Maya David Winsemius Retrieve Axis coordinates from map Peter Alspach Retrieve Axis coordinates from map Sarah Goslee working on a data frame Eduardo M. A. M. Mendes R-3.1.1 - R CMD INSTALL problem Jeff Newmiller R-3.1.1 - R CMD INSTALL problem Eduardo M. A. M. Mendes R-3.1.1 - R CMD INSTALL problem Matthew working on a data frame Julien Million Retrieve Axis coordinates from map Peter Alspach Using apply() with functions I wrote Pfeiffer, Steven Using apply() with functions I wrote Bert Gunter Using apply() with functions I wrote Henrik Bengtsson R CMD BATCH *without* saving output William Dunlap R CMD BATCH *without* saving output Ferra Xu Kernel smoothing density function Pfeiffer, Steven Using apply() with functions I wrote Nick Matzke R CMD BATCH *without* saving output Nick Matzke R CMD BATCH *without* saving output Sarah Goslee Creating Functions in R Peter Maclean Technological/Logistic Substitution Model Nick Matzke R CMD BATCH *without* saving output Simon Urbanek Cairo package error: "unable to load..." Pavneet Arora Creating Functions in R super A question about call() jim holtman Creating Functions in R David L Carlson Creating Functions in R Sarah Goslee Creating Functions in R Keith Jewell Windows R doesn't recognize shortcuts ? Simon Urbanek Cairo package error: "unable to load..." Pavneet Arora Creating Functions in R Duncan Murdoch A question about call() PIKAL Petr Fast function for each row of a data.table Martina Carrete MCMCglmm question Jeff Newmiller A question about call()

Wednesday, July 23, 2014 35 emails

Brian Ripley Cairo package error: "unable to load..." super A question about call() super A question about call() Ashutosh Nanda Problems with Installing RMySQL Package (Windows, R: 3.1.0 (64 bit), using RStudio) Leonardo Gama Cairo package error: "unable to load..." Aurélien Philippot Fast function for each row of a data.table John Fox Expressing a multinomial GLM as a series of binomial GLMs Uwe Ligges corresponding replicated el of one matrix in another matrix or vector carol white corresponding replicated el of one matrix in another matrix or vector arun filter one entry, in dependence of date Uwe Ligges corresponding replicated el of one matrix in another matrix or vector arun corresponding replicated el of one matrix in another matrix or vector Christoph Scherber Expressing a multinomial GLM as a series of binomial GLMs carol white corresponding replicated el of one matrix in another matrix or vector Khurram Nadeem Importing random subsets of a data file James White Importing random subsets of a data file Greg Snow Importing random subsets of a data file David Winsemius Importing random subsets of a data file Michael Friendly shading cells in a latex table by value Sarah Goslee Importing random subsets of a data file Khurram Nadeem Importing random subsets of a data file Duncan Murdoch shading cells in a latex table by value Sarah Goslee Dx accuracy measures from raw data Anoop Shah Dx accuracy measures from raw data ONKELINX, Thierry Trying to change a qplot() to a ggplot()+ John McKown Trying to change a qplot() to a ggplot()+ John McKown Trying to change a qplot() to a ggplot()+ ce Windows R doesn't recognize shortcuts ? Michael Friendly shading cells in a latex table by value Duncan Murdoch Windows R doesn't recognize shortcuts ? ce Windows R doesn't recognize shortcuts ? Joe W. Byers Application design. Brian Ripley R_HOME setting on Linux Richard Chandler-Mant R_HOME setting on Linux npan1990 . Feature Selection and Regression

Tuesday, July 22, 2014 29 emails

Sowmya Rudregowda need help for ppval() and xirr() in R Byron Dom dx accuracy measures from raw data Charles C. Berry Expressing a multinomial GLM as a series of binomial GLMs David Winsemius packages across different versions of R Jennifer Gruhn Randomly sample data frame points relative to raster grid cells Matt Sundquist plotly John Fox Expressing a multinomial GLM as a series of binomial GLMs Ronald Kölpin Maximum likelihood estimation (stats4::mle) Greg Snow Application design. Marino David Partition of sums of squares (ANOVA) Bert Gunter Partition of sums of squares (ANOVA) Marino David Partition of sums of squares (ANOVA) John Fox repeated anova Paul Miller Survival Analysis with an Historical Control Charles C. Berry Expressing a multinomial GLM as a series of binomial GLMs Bert Gunter 1st el of a list of vectors Jeff Newmiller Code formatting question - too ugly? John Fox how to put two plots of scatterplotMatrix side by side in one plot? Christoph Scherber Expressing a multinomial GLM as a series of binomial GLMs John McKown Code formatting question - too ugly? Adams, Jean Weight, weight - do tell me Peter Dalgaard Maximum likelihood estimation (stats4::mle) Peter Dalgaard I need help in seeing the code Lynn Govaert repeated anova Katharina Mersmann lattice -xyplot MLSC how to put two plots of scatterplotMatrix side by side in one plot? Highland Statistics Ltd 2 remaining seats on stats course at Murdoch University arun 1st el of a list of vectors Julian Schulze Multiple Imputation of longitudinal data in MICE and statistical analyses of object type mids

Monday, July 21, 2014 43 emails

PIKAL Petr I need help in seeing the code Sarah Goslee I need help in seeing the code Hervé Pagès 1st el of a list of vectors Hervé Pagès odd, even indices of a vector Darius Mulia I need help in seeing the code Bert Gunter odd, even indices of a vector Richard M. Heiberger 1st el of a list of vectors Richard M. Heiberger odd, even indices of a vector David Winsemius Maximum likelihood estimation (stats4::mle) Richard M. Heiberger Application design. John McKown Application design. John Fox Help with SEM package - model significance Bernardo Santos Help with SEM package - model significance Rolf Turner Semi Markov warnings ( for dummies) array chip standard error of survfit.coxph() array chip standard error of survfit.coxph() Brian Diggs roxygen2 David Winsemius Include plotting symbals pch 16 and 17 into captions / text in pdf graph carol white odd, even indices of a vector William Dunlap duplicated rows of a matrix carol white 1st el of a list of vectors carol white duplicated rows of a matrix Robert Lynch anova.lme William Dunlap duplicated rows of a matrix Ronald Kölpin Maximum likelihood estimation (stats4::mle) Greg Snow help with column substaction with a twist array chip standard error of survfit.coxph() Samantha PameLa deviance as a goodness of fit in GLM Kristynn Sullivan Generating nonlinear Poisson time series data Fowler, Mark two questions - function help and 32vs64 bit sessions Wilson, Jenny Error message for corAR1() Rajibul Mian Estimation of Zero Inflated Over dispersed Beta Binomial Using glamADMB() Andrews, Chris Survival Analysis with an Historical Control Lenth, Russell V Weight, weight - do tell me Duncan Murdoch two questions - function help and 32vs64 bit sessions carol white duplicated rows of a matrix M.A. Pet Semi Markov warnings ( for dummies) Fowler, Mark two questions - function help and 32vs64 bit sessions Rainer M Krug Include plotting symbals pch 16 and 17 into captions / text in pdf graph Brian Ripley packages across different versions of R Charles Thuo packages across different versions of R Sarah Goslee plotly Shane Carey plotly

Sunday, July 20, 2014 14 emails

PIKAL Petr Plot the means with simultaneous horizontal and vertical error bars Duncan Murdoch Vector of Numbers Not Output to Screen David Winsemius Vector of Numbers Not Output to Screen MacQueen, Don spplot help Anoop Shah dx accuracy measures from raw data Ubernerdy help with column substaction with a twist John McKown help with column substaction with a twist 张天添 How to determine if GARCH model has 'false convergence' Duncan Murdoch Vector of Numbers Not Output to Screen jim holtman help with column substaction with a twist Ubernerdy help with column substaction with a twist javad bayat spplot help Kevin Kunzmann roxygen2 Vishal Chari (no subject)

Saturday, July 19, 2014 15 emails

Dario Strbenac Vector of Numbers Not Output to Screen Veronica Andreo help with script to get starting date of blooms Hadley Wickham String comparison, trailing blanks make a difference. John McKown String comparison, trailing blanks make a difference. Adib Shafi understanding the parameters of 'spca' function of 'elasticnet' package Ingo Wardinski using postscript() for multiple individual files William Dunlap using postscript() for multiple individual files Andras Farkas nlxb CI Ingo Wardinski using postscript() for multiple individual files William Dunlap How to bin x,y,z vectors into matrix? Sarah Goslee How to bin x,y,z vectors into matrix? Mark Miller How to bin x,y,z vectors into matrix? Duncan Murdoch using postscript() for multiple individual files Jim Lemon help with script to get starting date of blooms Ingo Wardinski using postscript() for multiple individual files

Friday, July 18, 2014 36 emails

Thursday, July 17, 2014 26 emails

Dario Strbenac Vector of Numbers Not Output to Screen Bert Gunter Vector of Numbers Not Output to Screen Rolf Turner Vector of Numbers Not Output to Screen David Winsemius Vector of Numbers Not Output to Screen ALBERTO VIEIRA FERREIRA MONTEIRO Equivalent of chartr to numeric Megan Bartlett Correlating multiple effect sizes within a study to study-level predictors: metafor package ALBERTO VIEIRA FERREIRA MONTEIRO Equivalent of chartr to numeric Emmanuel Blondel (GMAIL) Reading SDMX Files in R Gang Chen Mapping from one vector to another Jeff Newmiller Vector of Numbers Not Output to Screen Rui Barradas Vector of Numbers Not Output to Screen Jeff Newmiller information Jeff Newmiller Mapping from one vector to another Sarah Goslee Vector of Numbers Not Output to Screen Gang Chen Mapping from one vector to another PIKAL Petr Mapping from one vector to another Sarah Goslee Mapping from one vector to another William Dunlap Mapping from one vector to another Gang Chen Mapping from one vector to another Ingrid Charvet Definition of the shape paramter in PERT (mc2d) Joe W. Byers download.file: unsuppported url scheme Raghuraman Ramachandran Help with Download of a comma separated file in zip format Fábio Magalhães Help with Download of a comma separated file in zip format Jessica Timms Model for lm keeps producing an error Michael Dewey Correlating multiple effect sizes within a study to study-level predictors: metafor package Raghuraman Ramachandran Help with Download of a comma separated file in zip format

Wednesday, July 16, 2014 39 emails

Tuesday, July 15, 2014 30 emails

Ludovic Brossard request of information about creating DLL from R to be used in other languages/programs Jeff Newmiller request of information about creating DLL from R to be used in other languages/programs William Dunlap Error with named definition argument to match.call David Winsemius Error with named definition argument to match.call William Dunlap Error with named definition argument to match.call David Winsemius Mac OSX Mavericks 10.9.3 Big Problem - New User David Winsemius Error with named definition argument to match.call Ludovic.Brossard request of information about creating DLL from R to be used in other languages/programs Adams, Jean List of Lists in For Loop Electron Musketeer Help with Download of a comma separated file in zip format Richard M. Heiberger Determine the order of Time series Jeff Newmiller request of information about creating DLL from R to be used in other languages/programs Ista Zahn Help with Download of a comma separated file in zip format Jeff Newmiller Help with Download of a comma separated file in zip format Peter Langfelder Cutting hierarchical cluster tree at specific height fails David L Carlson Cutting hierarchical cluster tree at specific height fails S Ellison how to remove outliers Richard M. Heiberger Determine the order of Time series Ludovic Brossard request of information about creating DLL from R to be used in other languages/programs Electron Musketeer Help with Download of a comma separated file in zip format jlh.membership Cutting hierarchical cluster tree at specific height fails Jeff Newmiller Reading SQL data - all at once, or "as needed"? John McKown Reading SQL data - all at once, or "as needed"? Eduardo Esteves Meaningfulness of applying the delta method (sensu alr3)... Velimir Gordic Granger causality test using VECM in R Fowler, Mark two questions - function help and 32vs64 bit sessions Monaly Mistry canonical correlation Bert Gunter how to remove outliers Johannes Moser Restricted fitting of two-component mixture distribution in R possible? Johannes Radinger Set file path in Biomod2

Monday, July 14, 2014 33 emails

Brian Ripley Update fail PIKAL Petr List of Lists by for Loop Ryan Dallavia Mac OSX Mavericks 10.9.3 Big Problem - New User Jeff Newmiller Mac OSX Mavericks 10.9.3 Big Problem - New User Hasan Diwan how to remove outliers Jim Lemon two questions - function help and 32vs64 bit sessions John Update fail Ryan Dallavia Mac OSX Mavericks 10.9.3 Big Problem - New User Megan Bartlett Correlating multiple effect sizes within a study to study-level predictors: metafor package Michael Friendly canonical correlation Kevin Wright New details about Cochran and Cox's chocolate cake data 张天添 Determine the order of Time series Munjal Patel List of Lists by for Loop Munjal Patel List of Lists in For Loop dragomir nedeltchev Dimensionality of Higher-Order Moments of rmgarch Jeff Newmiller two questions - function help and 32vs64 bit sessions Simon Wood gamm4 and lme4 error jlh.membership Zeta-squared transformation use R? Fowler, Mark two questions - function help and 32vs64 bit sessions Marta valdes lopez how to remove outliers David Stevens Merge rows j verzani R GUI for undergraduate lab class? Jeff Newmiller sqldf problems Gabor Grothendieck sqldf problems Dr. Thomas W. MacFarland R] R GUI for undergraduate lab class? Viechtbauer Wolfgang (STAT) Correlating multiple effect sizes within a study to study-level predictors: metafor package Michael Dewey Correlating multiple effect sizes within a study to study-level predictors: metafor package Uwe Ligges Scatterplot3D in r Juan Daniel García sqldf problems Johannes Radinger Cutting hierarchical cluster tree at specific height fails Michael Dewey Zeta-squared transformation use R? Abhinaba Roy Multiple Correspondence Analysis S Ellison Grouped Boxplot

Sunday, July 13, 2014 18 emails

Babak Bastan Scatterplot3D in r jlh.membership Zeta-squared transformation use R? Raghuraman Ramachandran canonical correlation Monaly Mistry canonical correlation Marc Schwartz Norton Virus program indicates that R3.1.1 is not reliable jim holtman Norton Virus program indicates that R3.1.1 is not reliable Jeff Newmiller Norton Virus program indicates that R3.1.1 is not reliable jim holtman 3.1.1-win.exe download jim holtman Norton Virus program indicates that R3.1.1 is not reliable John Fox canonical correlation Monaly Mistry canonical correlation John Fox canonical correlation John Fox canonical correlation Upananda Pani non causality test and wavelet decompostion Graham Williams Basket Analysis in R: extract rules Graham Williams Decision Tree Christoph Scherber R GUI for undergraduate lab class? Raghuraman Ramachandran canonical correlation

Saturday, July 12, 2014 20 emails

Nicholas Lange gamm4 and lme4 error Ranjan Maitra R GUI for undergraduate lab class? Monaly Mistry canonical correlation David Winsemius multiplicative error Richard M. Heiberger R GUI for undergraduate lab class? Roy Mendelssohn - NOAA Federal R GUI for undergraduate lab class? Louise Stevenson R GUI for undergraduate lab class? Raghuraman Ramachandran lm and 450k data Luke Tierney lapply returns NULL ? Baba Bukar Metropolis-within Gibbs sampling ce lapply returns NULL ? Jeff Newmiller lapply returns NULL ? Rui Barradas lapply returns NULL ? David Stevens Merge rows Jessica Timms lm and 450k data Uwe Ligges lapply returns NULL ? ce lapply returns NULL ? Miles Yang Zeta-squared transformation use R? Kevin Kunzmann multiplicative error Jim Lemon Merge rows

Friday, July 11, 2014 24 emails

Jeff Newmiller Zeta-squared transformation use R? Miles Yang Zeta-squared transformation use R? Anirudh Kondaveeti Finding sparse cuts in a graph Megan Bartlett Correlating multiple effect sizes within a study to study-level predictors: metafor package Bert Gunter CI for nlme predictions William Dunlap Problems with read.table and data structure David L Carlson Problems with read.table and data structure Sarah Goslee Merge rows Marc Schwartz Problems with read.table and data structure Marc Schwartz Problems with read.table and data structure Robert Lynch CI for nlme predictions Sébastien Bihorel Information about font Sarah Goslee Merge rows Ryan de Vera Merge rows John Fox Cansisc: Error in eigen(eHe, symmetric = TRUE) David L Carlson Cutting hierarchical cluster tree at specific height fails Tim Richter-Heitmann Problems with read.table and data structure Millo Giovanni (no subject) Jorge I Velez Grouped Boxplot Andrews, Chris Median expected survival Timothy W. Cook Paper on Analytics using R Federico Razzoli Installing RMySQL on Debian Johannes Radinger Cutting hierarchical cluster tree at specific height fails Hadley Wickham list of valid R encodings.in source(...,encoding=)

Thursday, July 10, 2014 42 emails

David Winsemius Installing RMySQL on Debian John Paper on Analytics using R anupam sinha Grouped Boxplot Katherine Gobin Paper on Analytics using R Abhinaba Roy Decision Tree Chris Feigl Build and install of Rstudio on ARMv7/Linux freezes John Fox linearHypothesis() ERROR-Message Duncan Mackay quantmod: How could I change the name in chartSeries Phan, Truong Q R Studio v3.0.3 for Windows 32bits is too slow Chris Feigl Porting GHC neccessary to install RStudio on ARM/Linux? Chris Feigl Installing RStudio for ARM architecture Kenn Konstabel R on Windows crashes when source'ing UTF-8 file Federico Razzoli Installing RMySQL on Debian Sarah Goslee Installing RMySQL on Debian Federico Razzoli Installing RMySQL on Debian William Dunlap table over a matrix dimension... Marc Schwartz table over a matrix dimension... Jonathan Greenberg table over a matrix dimension... Paul Miller Survival Analysis with an Historical Control William Dunlap find & remove sequences of at least N values for a specific value Maria Judith Carmona H Cansisc: Error in eigen(eHe, symmetric = TRUE) Duncan Murdoch R on Windows crashes when source'ing UTF-8 file John McKown list of valid R encodings.in source(...,encoding=) Adams, Jean Decision Tree PIKAL Petr function completing properly David L Carlson Cansisc: Error in eigen(eHe, symmetric = TRUE) Kenn Konstabel R on Windows crashes when source'ing UTF-8 file Terry Therneau Survival Analysis with an Historical Control atramon nScree Sébastien Bihorel Information about font Paul Miller Survival Analysis with an Historical Control Sébastien Bihorel Information about font jeff6868 find & remove sequences of at least N values for a specific value Kenn Konstabel R on Windows crashes when source'ing UTF-8 file Marcus Schwemmle Preserving topology when simplifying Spatial Polygons Jim Lemon function completing properly madhvi.gupta Error in installing package raccumulo for R version 3.1.0 Marco Barbàra Median expected survival Lars Bishop Median expected survival Katharina Mersmann linearHypothesis() ERROR-Message Peter Dalgaard R 3.1.1 is released Michael Friendly Cansisc: Error in eigen(eHe, symmetric = TRUE)

Wednesday, July 9, 2014 49 emails

Abhinaba Roy Decision Tree David Winsemius Information about font William quantmod: How could I change the name in chartSeries Sébastien Bihorel Information about font Maria Judith Carmona H Cansisc: Error in eigen(eHe, symmetric = TRUE) John Fox Cansisc: Error in eigen(eHe, symmetric = TRUE) Jeff Newmiller function completing properly Peter Dalgaard R Studio v3.0.3 for Windows 32bits is too slow Janet Choate function completing properly MacQueen, Don < symbols in a data frame Maria Judith Carmona H Cansisc: Error in eigen(eHe, symmetric = TRUE) John Fox Cansisc: Error in eigen(eHe, symmetric = TRUE) Rolf Turner R Studio v3.0.3 for Windows 32bits is too slow Adam Zeilinger Installing rgdal and rjags packages on a linux cluster Folkes, Michael using match to obtain non-sorted index values from non-sortedvector David Winsemius using match to obtain non-sorted index values from non-sortedvector Claudia Beleites < symbols in a data frame Folkes, Michael using match to obtain non-sorted index values from non-sortedvector David L Carlson using match to obtain non-sorted index values from non-sorted vector Folkes, Michael using match to obtain non-sorted index values from non-sorted vector Thomas Levine HPGL or PCL plotting device? Or otherwise plotting plots Sam Albers < symbols in a data frame Beatriz González Domínguez How to include factor levels into plot title? Bert Gunter < symbols in a data frame Marc Schwartz < symbols in a data frame Sarah Goslee < symbols in a data frame Sam Albers < symbols in a data frame Lorenzo Alfieri reorder a list Maria Judith Carmona H Cansisc: Error in eigen(eHe, symmetric = TRUE) Andrews, Chris Survival Analysis with an Historical Control William Dunlap reorder a list Jeff Newmiller R Studio v3.0.3 for Windows 32bits is too slow Sarah Goslee How to include factor levels into plot title? David L Carlson Cutting hierarchical cluster tree at specific height fails Beatriz González Domínguez How to include factor levels into plot title? David Smith Revolutions blog: June 2014 Roundup Alvaro Flores eclat problem Bert Gunter R Studio v3.0.3 for Windows 32bits is too slow Michael Hahsler eclat problem Thomas Levine HPGL or PCL plotting device? Or otherwise plotting plots Thomas Levine HPGL or PCL plotting device? Or otherwise plotting plots Johannes Radinger Cutting hierarchical cluster tree at specific height fails João Azevedo Patrício Transform a data.frame with "; " sep column and another one in a a new one with the same two column but with repetitions Michael Sumner How to process each element in 3 minute interval using a for loop in R? Carlo Giovanni Camarda matrix built by diagonal matrices with a given structure (2nd trial) Lorenzo Alfieri reorder a list Jack Wasey icd9 - a new R package Brian Ripley How to process each element in 3 minute interval using a for loop in R? Takatsugu Kobayashi How to process each element in 3 minute interval using a for loop in R?

Tuesday, July 8, 2014 41 emails

David Winsemius Error in file.exists(swf.file) : invalid 'file' argument Phan, Truong Q R Studio v3.0.3 for Windows 32bits is too slow arun reorder a list Jeff Newmiller Error in file.exists(swf.file) : invalid 'file' argument Scott Davis Error evaluating partitioning around medoids clustering method R clValid package Cheryl Johnson Error in file.exists(swf.file) : invalid 'file' argument Eva Prieto Castro Consulta paquetización con versión R 3.1.0 Farnoosh Sheikhi Seprate last name and first name into two columns Harish Nair unable to install rJava in centos R William Dunlap reorder a list Greg Snow reorder a list Greg Snow reorder a list Greg Snow reorder a list Frede Aakmann Tøgersen Consulta paquetización con versión R 3.1.0 Greg Snow reorder a list jim holtman reorder a list Lorenzo Alfieri reorder a list Martyn Byng PCA with a lot of zeros Jim Silverton PCA with a lot of zeros Paul Miller Survival Analysis with an Historical Control gktahon Extrapolation of rarefaction curve Alvaro Flores eclat problem Uwe Ligges eclat problem Uwe Ligges writing matrices of different rows in a file Göran Broström Predictions from "coxph" or "cph" objects Uwe Ligges (PLM- package) Residual-Plotting and missing Values Uwe Ligges R help Witold E Wolski sort order of a character sequence is different on windose and linux (linux result) Eva Prieto Castro Consulta paquetización con versión R 3.1.0 Eva Prieto Castro Consulta paquetización con versión R 3.1.0 Frede Aakmann Tøgersen Need some assistance in plotting distributions Eva Prieto Castro Consulta paquetización con versión R 3.1.0 Duncan Murdoch Consulta paquetización con versión R 3.1.0 Vivek Das Need some assistance in plotting distributions jim holtman Need some assistance in plotting distributions Soeren Groettrup Formating cell with xlsx package Vivek Das Need some assistance in plotting distributions Eva Prieto Castro Consulta paquetización con versión R 3.1.0 Artur Rataj A custom legend for three data frames in one plot Artur Rataj A custom legend for three data frames in one plot gktahon Plot does not show in R

Monday, July 7, 2014 40 emails

Sunday, July 6, 2014 30 emails

Duncan Mackay Question regarding lattice::levelplot and distribution of colors Sunny Srivastava Question regarding lattice::levelplot and distribution of colors David Winsemius Question regarding lattice::levelplot and distribution of colors Joshua Wiley Box-cox transformation Ravi Varadhan Box-cox transformation Jim Lemon A custom legend for three data frames in one plot Sunny Srivastava Question regarding lattice::levelplot and distribution of colors Rolf Turner spatstat package: Simulating from fitted Matern cluster process model fails Mari package: RWinEdt question Duncan Murdoch package: RWinEdt question Uwe Ligges package: RWinEdt question Frank E Harrell Jr Using subplot (from Hmisc) along with par(mfrow) Mari package: RWinEdt question Clive Nicholas Expanding dataset on the values of one of its variables arun Expanding dataset on the values of one of its variables Frank E Harrell Jr Predictions from "coxph" or "cph" objects Clive Nicholas Expanding dataset on the values of one of its variables Artur Rataj A custom legend for three data frames in one plot moleps Using R to analyze multiple MRI studies Philipp Hunziker spatstat package: Simulating from fitted Matern cluster process model fails Duncan Murdoch sort order of a character sequence is different on windose and linux (linux result) Axel Urbiz Predictions from "coxph" or "cph" objects Witold E Wolski sort order of a character sequence is different on windose and linux (linux result) Duncan Murdoch sort order of a character sequence is different on windose and linux (linux result) Witold E Wolski sort order of a character sequence is different on windose and linux (linux result) Duncan Murdoch sort order of a character sequence is different on windose and linux (linux result) Witold E Wolski sort order of a character sequence is different on windose and linux (windows result) Witold E Wolski sort order of a character sequence is different on windose and linux (linux result) Göran Broström Predictions from "coxph" or "cph" objects Göran Broström Predictions from "coxph" or "cph" objects

Saturday, July 5, 2014 14 emails

Ben Bolker How to extract convergence code from lmer object? David Winsemius Predictions from "coxph" or "cph" objects David Winsemius Predictions from "coxph" or "cph" objects Axel Urbiz Predictions from "coxph" or "cph" objects MacQueen, Don Best practice: to factor or not to factor for float variables David Winsemius Predictions from "coxph" or "cph" objects Suzen, Mehmet Using R to analyze multiple MRI studies Greg Snow Using subplot (from Hmisc) along with par(mfrow) Viechtbauer Wolfgang (STAT) metafor package: changing decimal in forest plot to midline decimal Patrick Burns how does a valid subscript can produce an "subscript out of bounds" error? Peter Dalgaard how does a valid subscript can produce an "subscript out of bounds" error? Witold E Wolski how does a valid subscript can produce an "subscript out of bounds" error? Axel Urbiz Predictions from "coxph" or "cph" objects Sarah Goslee Calling Matrices from a Function

Friday, July 4, 2014 32 emails

John McKown Transform a data.frame with "; " sep column and another one in a a new one with the same two column but with repetitions David Winsemius Display a dataframe Duncan Murdoch how does a valid subscript can produce an "subscript out of bounds" error? Duncan Murdoch how does a valid subscript can produce an "subscript out of bounds" error? Witold E Wolski how does a valid subscript can produce an "subscript out of bounds" error? Witold E Wolski data.table merge question... Sebastian Schubert Best practice: to factor or not to factor for float variables Vijay goel Training and testing on Unbalanced Data Set arun Display a dataframe David Winsemius Best practice: to factor or not to factor for float variables Cheryl Johnson Calling Matrices from a Function Hadley Wickham Best practice: to factor or not to factor for float variables Anne-Marie B. Rugarch package: arfimaspec and arfimafit João Azevedo Patrício Transform a data.frame with "; " sep column and another one in a a new one with the same two column but with repetitions Gang Chen Display a dataframe PIKAL Petr Best practice: to factor or not to factor for float variables Gang Chen Display a dataframe arun Transform a data.frame with "; " sep column and another one in a a new one with the same two column but with repetitions PIKAL Petr applying operations within() a matrix's environment João Azevedo Patrício Transform a data.frame with "; " sep column and another one in a a new one with the same two column but with repetitions Juan Andres Hernandez How to extract convergence code from lmer object? gktahon How to apply data sets in Vennerable? Steve Bellan applying operations within() a matrix's environment Sebastian Schubert Best practice: to factor or not to factor for float variables Jim Lemon error:max not meaningful for factors Martin Guetlein sammon fails with duplicates error, but no duplicates there (MASS package) Peter Dalgaard Fisher Scoring v/s Coordinate Descent for MLE in R PIKAL Petr error:max not meaningful for factors PIKAL Petr Dataframes and text identifier columns Frede Aakmann Tøgersen sammon fails with duplicates error, but no duplicates there (MASS package) PIKAL Petr applying operations within() a matrix's environment Martin Guetlein sammon fails with duplicates error, but no duplicates there (MASS package)

Thursday, July 3, 2014 61 emails

arun Display a dataframe David Winsemius Using subplot (from Hmisc) along with par(mfrow) David Winsemius How to install Vennerable Steve Bellan applying operations within() a matrix's environment David L Carlson Display a dataframe Marc Schwartz access an element of a list without looping Gang Chen Display a dataframe Greg Snow access an element of a list without looping Spencer Graves intermittent errors in [.data.frame Cory Champagne Using subplot (from Hmisc) along with par(mfrow) carol white access an element of a list without looping Duncan Murdoch intermittent errors in [.data.frame John Kane Help with tables in R Spencer Graves intermittent errors in [.data.frame Ian Cromwell Analysis of censored cost data Matthew Keller odd behavior of seq() Peter Langfelder odd behavior of seq() jim holtman odd behavior of seq() Marc Schwartz odd behavior of seq() Matthew Keller odd behavior of seq() Adams, Jean How to install Vennerable Vijay goel Fisher Scoring v/s Coordinate Descent for MLE in R dstrick1 How to hide the vector number output in write.table function? Frede Aakmann Tøgersen How to hide the vector number output in write.table function? Tomas Lanczos RPostgreSQL, RS-DBI error dstrick1 How to hide the vector number output in write.table function? ce Order Book details in R Interactive Brokers Package moleps Using R to analyze multiple MRI studies David L Carlson Help with tables in R PIKAL Petr Residual-Plotting and na.exclude Basil Iannone correlation structures in gls models Tomas Lanczos RPostgreSQL, RS-DBI error Katharina Mersmann Residual-Plotting and na.exclude PIKAL Petr Help with tables in R Michael Dewey Compilation fails for package 'BayesTree' on R 3.0.1 for Windows Duncan Mackay Comparing two times with different format Dietlinde Schmidt metafor package: changing decimal in forest plot to midline decimal Worthington, Thomas A Checking whether a time series is stationary with irregular spaced data Barry Lambert Help with tables in R PIKAL Petr Help with tables in R Marte Hansen Comparing two times with different format gktahon How to install Vennerable Duncan Mackay Comparing two times with different format Marta valdes lopez error:max not meaningful for factors Duncan Murdoch Help with tables in R Jim Lemon Help with tables in R arun Sorting data.frame datewise in a descending order and geting datewise subtotl Brian Willis Dataframes and text identifier columns PIKAL Petr Comparing two times with different format Marte Hansen Comparing two times with different format Jeff Newmiller Help with tables in R Frede Aakmann Tøgersen parLapply on sqlQuery (from package RODBC) PIKAL Petr Dataframes and text identifier columns PIKAL Petr Help with tables in R veepsirtt Sorting data.frame datewise in a descending order and geting datewise subtotl PIKAL Petr Data frame with unequal lines per case Abhinaba Roy Problem in compiling a function veepsirtt Sorting data.frame datewise in a descending order and geting datewise subtotl Pascal Oettli Problem in compiling a function Javier Compilation fails for package 'BayesTree' on R 3.0.1 for Windows Abhinaba Roy Problem in compiling a function

Wednesday, July 2, 2014 31 emails

Pascal Oettli Problem in compiling a function Abhinaba Roy Problem in compiling a function Pat Jackson Data frame with unequal lines per case veepsirtt Sorting data.frame datewise in a descending order and geting datewise subtotl Barry Lambert Help with tables in R Jim Lemon error:max not meaningful for factors David Winsemius plot in generalized additive model (GAM) Worthington, Thomas A Checking whether a time series is stationary with irregular spaced data Frank E Harrell Jr survplot invert number at risk labels Marco Barbàra survplot invert number at risk labels Tevlin, Dylan parLapply on sqlQuery (from package RODBC) David Winsemius Data visualization: overlay columns of train/test/validation datasets Agostino Di Ciaula plot in generalized additive model (GAM) Supriya Jain Data visualization: overlay columns of train/test/validation datasets Christopher W. Ryan empty density plot for point pattern in spatstat David Winsemius plot in generalized additive model (GAM) Marc Jekel robust standard errors in maximum likelihood estimation; sandwich estimator for mle/mle2 Nordlund, Dan (DSHS/RDA) Getting data from Table in RStudio Basil Iannone correlation structures in gls cdevlin48 How do I call a C++ function (for k-means) within R? Agostino Di Ciaula plot in generalized additive model (GAM) Marta valdes lopez error:max not meaningful for factors David Winsemius plot in generalized additive model (GAM) Shanae Clarke Getting data from Table in RStudio arun Sorting data.frame datewise in a descending order and geting datewise subtotl Brian Willis Dataframes and text identifier columns Peter Dalgaard combining data from multiple read.delim() invocations. agostinodiciaula at tiscali.it plot in generalized additive model (GAM) Param Jeet Socket Connection in R super What is the group generic mean? Brian Ripley Socket Connection in R

Tuesday, July 1, 2014 37 emails

David Winsemius plot in generalized additive model (GAM) agostinodiciaula at tiscali.it plot in generalized additive model (GAM) arun Stringr / Regular Expressions advice Duncan Mackay x axis labelling David Winsemius plot in generalized additive model (GAM) David Winsemius Data visualization: overlay columns of train/test/validation datasets Supriya Jain Data visualization: overlay columns of train/test/validation datasets Jim Lemon x axis labelling Erin Hodgess an incredibly trivial question about nls Jan Graffelman Using RCMD INSTALL under Spanish version of windows. Rolf Turner an incredibly trivial question about nls Peter Langfelder an incredibly trivial question about nls Bert Gunter an incredibly trivial question about nls Bert Gunter combining data from multiple read.delim() invocations. Erin Hodgess an incredibly trivial question about nls David Winsemius Generating Patient Data John McKown combining data from multiple read.delim() invocations. Michael Peng x axis labelling David Winsemius 1-dinemsional point process David L Carlson combining data from multiple read.delim() invocations. VINCENT DEAN BOYCE Stringr / Regular Expressions advice Michael Millar x axis labelling Bert Gunter combining data from multiple read.delim() invocations. David L Carlson combining data from multiple read.delim() invocations. dstrick1 Using CSS package to extract text from html Andre Weeks R help Mitchell Maltenfort logistic regression for data with repeated measures Suzon Sepp logistic regression for data with repeated measures Katharina Mersmann (PLM- package) Residual-Plotting and missing Values Param Jeet Socket Connection in R jeeth ghambole Order Book details in R Interactive Brokers Package John McKown combining data from multiple read.delim() invocations. Uwe Ligges c() with POSIXlt objects and their timezone is lost Uwe Ligges Dead link in the help page of as.Date() Beatriz González Domínguez How to plot individual pdf files for each wrapped plot with ggplot2? Beatriz González Domínguez How to plot individual pdf files for each wrapped plot with ggplot2? adc plot in generalized additive model (GAM)

Monday, June 30, 2014 5 emails

Jorge I Velez From long to wide format Nordlund, Dan (DSHS/RDA) Getting data from Table in RStudio Jim Lemon yet another regular expression Rolf Turner Delaunay triangles with LONG/LAT + biomass Duncan Mackay yet another regular expression

R-help July 2014