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R-help September 2014

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"missings=function(x) x[x==998|x==999]<-NA" doesn't work...

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"timeDate" package: Read dates from xls or txt

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'mv: preserving permissions for `all.R': Operation not supported' when installing R 3.1.0 via compiling source code in CentOS

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..nlme: start values necessary even though using self-start function?..

2 msgs

.C and .Fortran

2 msgs

8 fast or 4 very fast cores?

4 msgs

<NA> from cut.Date

3 msgs

A new environment within the main function

4 msgs

ANN ARIMA or ANN ES Examples ?

1 msg

ANOVA and permutation tests : beware of traps

3 msgs

About the unit of shapefile and raster

1 msg

Adjusted R2 for Multivariate Regression Trees (MRT)

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Adjusted R2 for Multivariate Regression Trees (MRT) (ignore the previous message)

2 msgs

Affinity Analysis at Product Category Level

1 msg

Agreement accuracy

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Announce: Lahman baseball database archive package, v 3.0

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Bayesian multivariate linear regression

1 msg

Best Distribution

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Bug in rep() function

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Building R for better performance

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Built R package with example

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Bus stop sequence matching problem

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CRAN (and crantastic) updates this week

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CRAN submission of Hmisc 3.14-5

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CRAN update: rms 4.2-1

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Can't seem to get lapply to work.

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Changepoint analysis--is it possible to attribute changpoints to explanatory variables?

2 msgs

Chen.Deo test

1 msg

Cluster -- Agnes function

3 msgs

Combining two data frames

3 msgs

Confused by dlnorm - densities do not match histogram

1 msg

Control color palette and legend in filled.contour

2 msgs

Convert time zone to difference from Coordinated

1 msg

Convert time zone to difference from Coordinated Universal Time

2 msgs

Converting factor data into Date-time format

2 msgs

Converting xy plot arguments into a point argument and fixed x-axis scaling

2 msgs

Copying tables from R to Excel

7 msgs

Correlation Matrix with a Covariate

4 msgs

Could someone recommend a package for time series?

5 msgs

Course Halifax: Introduction to Linear mixed effects models, GLMM and MCMC with R

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Course Lisbon: Introduction to Linear mixed effects models, GLMM and MCMC with R

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Covariance between two dichotomous variables

2 msgs

CoxME: Family relatedness

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Custom Function Not Completely working

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Data frame which includes a non-existent date

3 msgs

Defining vectors with per-determined correlations

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Depth vs Temp graph for different transects

3 msgs

Detect expired RSQLiteConnection?

4 msgs

Dynamic regex/sub changes to function

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EXTENTS DO NOT OVERLAP

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Efficient frontier

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Error : '.path.package' is defunct.

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Error Reading from Connection

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Error in predict.lm() for models with no intercept?

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Error in predict.lm() for models without intercept?

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Error in quantile.default(resids) : missing values and NaN's not allowed if 'na.rm' is FALSE

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Error in rownames

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Error in ur.df function

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Error with RJDBC when trying dbUnloadDriver()

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Extract model from deriv3 or nls

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Failure with .Rprofile on Mac OS X

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Four available places on GLMM course in Banff

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GLM Help

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Generating unordered, with replacement, samples

8 msgs

Help on tidy_source

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Help with R solve

3 msgs

Help with continuous color plot

5 msgs

Help with conversion of variable labels (Hmisc and Epicalc)

3 msgs

Help with regression

3 msgs

Histogram from a single column of a data frame

3 msgs

How can I create colors correspond to the number of a variable?

3 msgs

How do I install a Windows package built from source?

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How do I really, I mean really, unload a package?

5 msgs

How to combine character month and year columns into one column

6 msgs

How to get JRI package

3 msgs

How to get data from elastic search

1 msg

How to get rid of my for loop

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How to get source code of a package

4 msgs

How to identify outliers with values five times 99th percentile

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How to plot a similar graph

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How to plot soil moisture data as a contour plot

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How to test for open pdf file on Windows before calling cairo_pdf ?

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How to use multi paragraph comment like /* and */ in cpp?

5 msgs

How to use multi paragraph comment like /* and */ in cpp?

7 msgs

If statement not working in a for loop when making it independent

1 msg

If statement not working in a for loop when making it independent

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Ifelse statement on a factor level data frame

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Import data from Excel to R

8 msgs

Installing nloptr in UNIX environ

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Inverse Student t-value

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Is it possible to have different animations saved together with the saveSWF command?

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Is there a log file on Window keeping track of the history of package installation (when was a package installed and what package was installed)?

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Is there an ID3 implementation in R?

6 msgs

Issue labelling datapoints in xyplot with two Y-axis

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Issue with a function

4 msgs

Issues with fa() function in "psych"

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KDE routines for data that is aggregated

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Linear regression of 0/1 response ElemStatLearn (Fig. 2.1 the elements of statistical learning)

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Lines instead of points in a scatterplot

7 msgs

Linkage disequilibrium plot

1 msg

Logging and writing error messages to a dataframe

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Loop does not work: Error in else statement

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Loop does not work: Error in else statement (II)

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Making a table

1 msg

Margins to fill matrix

6 msgs

Masked from package

8 msgs

Match beginning and end of string (grepl)

2 msgs

Median of streaming data

13 msgs

Mixed sorting/ordering of strings acknowledging roman numerals?

2 msgs

Need help with R in Boston area this Friday-Sunday paid gig

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New R package ``bvarsv''

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Obtain 00Index.html

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Obtain coefficients of several nlme objects

1 msg

Operator proposal: %between%

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Optometrists and Ophthalmologists dataset

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Overwriting a procedure

6 msgs

Package 'compositions' and R-3.1.0 [UPDATE]

1 msg

Package 'compositions', function acomp() With Missing Data

1 msg

Parliament Seats Graph

7 msgs

Performance (speed) of ggplot

4 msgs

Plot Lines instead of colour bands in R

2 msgs

Plotting Categorical/Numerical Data?

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Plotting boundary lines from shapefiles overtop a map of Canada

9 msgs

Problem when estimating through "dlm" package

1 msg

Problems bootstrapping multigroup SEM

3 msgs

Problems with bstats::white.test()

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Propensity Score Matching with Restrictions (Matching package)

1 msg

Pseudo R squared for quantile regression with replicates

4 msgs

Pseudo R squared for quantile regression with replicates

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Psych package

1 msg

Quantile

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Question about searchTwitter{twitteR}

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R "write" strange behavior in huge file

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R Inter Process Communication tools/packages ?

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R for chemistry

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R's memory limitation and Hadoop

7 msgs

R, Big Data and books

4 msgs

R/Ubuntu, “package ‘stats’ in options(”defaultPackages“) was not found”

9 msgs

R2WINBUGS Error message

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RGEOS ERROR

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RGtk2 drawing area as cairo device - no points

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RJavaClassLoader and system classloader

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RMOA data stream modelling using MOA (Massive Online Analysis)

1 msg

ReadMM does not support array format

1 msg

Reading text file with fortran format

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Regarding R package spatstat

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Revolutions blog roundup: August 2014

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Robust Standard Error in R

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Rép : ANOVA and permutation tests : beware of traps

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Savitzky-Golay Smoother

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See the numeric codes of a factor

8 msgs

Sentence Splitting using R's openNLP library is not efficient

1 msg

Simulating from a Weibull distribution

5 msgs

Solving equations

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SpectrumBackground

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Subset a column with specific characters

2 msgs

Testing general hypotheses on regression coefficients

10 msgs

Text Mining in Non English Speaking Countries

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The newest version of Rstudio Desktop v0.98.1049 couldn't be installed

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To Add a variable from Df1 to Df2 which have a same common variable

1 msg

To Add a variable from Df1 to Df2 which have a same common variable

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Training a model using glm

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Turn Rank Ordering Into Numerical Scores By Transposing A Data Frame

4 msgs

URLdecode problems

3 msgs

Unexpected behavior when giving a value to a new variable based on the value of another variable

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Unexpected behaviour of plyr::ddply

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Unique values in dataframe columns

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Univariate results from MANOVA with Adonis?

1 msg

Updates to R Core and R Foundation Membership

1 msg

Using "survey" package with ACS PUMS

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Using R in our commercial business application

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Using R to get updated access token on FB Graph API?

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Using factor levels as coordinates with geom_rect

2 msgs

Using read.csv.sql() to read in specific columns

2 msgs

Using sqldf() to read in .fwf files

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Why does debugging print() change output of function?

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Why does debugging print() change output of function?

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Writing .csv file

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X11/Intrinsic.h preventing build on rhel

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adding rows

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apply block of if statements with menu function

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beta package for 3D PDF output

1 msg

bivariate ordered probit model

1 msg

cairo_pdf crashing R on Windows

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calculate Euclidean distances between populations in R with this data structure

1 msg

calculate Euclidean distances between populations in R with this data structure

4 msgs

chi-square test

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citation of a task view

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column names to row names

5 msgs

coplot: extract regression output

1 msg

could not plot my spatial species points on the raster data

2 msgs

create new column by replacing multiple unique values in existing column

1 msg

create new column by replacing multiple unique values in existing column

2 msgs

ddply question

1 msg

depth of labels of axis

12 msgs

division of col by the sum of the col

5 msgs

draw piecharts or histograms at the points of a scatterplot

2 msgs

error in rownames

7 msgs

extract GO results in xml format

1 msg

factor(300000, levels=1:300000) gives NA

3 msgs

find the data frames in list of objects and make a list of them

1 msg

fitting distribution

1 msg

frequencies of a discrete numeric variable, including zeros

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ggplot - boxplot and points split by two factors

3 msgs

ggplot y-axis labels are not continuous

5 msgs

gplot heatmaps: clustering according to rowsidecolors + key.xtickfun

3 msgs

hadley's book

4 msgs

help with splitting parts of data frame

2 msgs

help.start() has a faulty link

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how to get the rows that satisfy a specific condition

4 msgs

how to run Fleming-Harrington weighted log-rank test in R

2 msgs

if else statement in loop

4 msgs

incorrect number of dimensions

2 msgs

kripp.alpha - Getting Data into It

1 msg

legend with math (greek letters) symbols

3 msgs

log likelihood and optimize

1 msg

marketing-questionnaire with split-design

3 msgs

mice - undefined columns selected

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modify function in a package

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multi-threading

2 msgs

mvpart error in R 3.1.1 "s_to_rp" not available for .C()

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ncdf size error

6 msgs

need help

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optim for maximization

2 msgs

optim, L-BFGS-B | constrained bounds on parms?

5 msgs

package "ape" read.dna diploid input data

1 msg

package Parallel - accessing remote cores on Windows using plink (PuTTY)

4 msgs

package loadable in R 3.1.1 Rterm but not in emacs/ESS

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parameterization question

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plot

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plots on log="y" scale with smooths

2 msgs

predictNLS {propagate} bug for multiple predictors?

1 msg

puzzled by time zone quirk

5 msgs

quadprog::solve.QP sometimes returns NaNs

1 msg

quantile regression with complex survey data

1 msg

question regarding pcalg package

1 msg

r convert current date format from y-m-d to m/d/y

1 msg

read.table() 1Gb text dataframe

6 msgs

residuals of glm

2 msgs

rgl zooming to an arbitrary location

3 msgs

robCompositions: Using impCoda

1 msg

scaling of Amat still recommended for quadprog::solve.QP ?

1 msg

sequential input script dataframe process functionality

10 msgs

shiny datatables column filtering plugin

6 msgs

simulation data in SEM

6 msgs

simulation data with mixed variables

1 msg

snow/Rmpi without MPI.spawn?

7 msgs

some question about vector[-NULL]

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some question about vector[-NULL]

13 msgs

spatstat rmh problem

7 msgs

splitting data

6 msgs

splm package: Spatial weights matrix of the 103 Italian provinces

3 msgs

strange date format after extracting calendar data with RSQLite

1 msg

structural equation modeling in sem, error, The model has negative degrees of freedom = -3, and The model is almost surely misspecified...

2 msgs

subset ffdf does not accept bit vector anymore (package ffbase)

1 msg

svyby and vcov function problem (Survey Package)

1 msg

taking daily modes from hourly data

2 msgs

the properties of a DATA to run DBSCAN in R

3 msgs

ubuntu 14.04

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unable to move temporary installation when install some packages

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uninstalled and reinstalled R, now cannot install packages

1 msg

using edit to extract codes from vignette failed

7 msgs

using edit to extract codes from vignette failed

5 msgs

using pdf(file="") encount a Chinese garbled

3 msgs

weird install package error

2 msgs

what happened when copying a function definition into R prompt then press Enter?

1 msg

wilcox.test - difference between p-values of R and online calculators

1 msg

wilcox.test - difference between p-values of R and online calculators

7 msgs

writeRaster dataType changes

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