R-help - January 2019 - Date View

Thursday, January 31, 2019 2 emails

David Winsemius Extract the coordinates of a Polylines Andy Beet nlme::gls potential bug

Wednesday, January 30, 2019 14 emails

William Dunlap periodicity Bert Gunter periodicity Marc Schwartz periodicity Bert Gunter periodicity William Dunlap periodicity Sarah Goslee periodicity Nick Wray periodicity Paul Bernal Setting xreg parameter to generate forecasts of mlp models Alan Feuerbacher Newbie Question on R versus Matlab/Octave versus C Alan Feuerbacher Newbie Question on R versus Matlab/Octave versus C javad bayat Extract the coordinates of a Polylines Martin Møller Skarbiniks Pedersen Newbie Question on R versus Matlab/Octave versus C Cory Whitney ethnobotanyR v0.1.3 Elahe chalabi create a network for a small text df

Tuesday, January 29, 2019 16 emails

Jeff Newmiller Newbie Question on R versus Matlab/Octave versus C Alan Feuerbacher how to ref data directly from bls.gov using their api Alan Feuerbacher Newbie Question on R versus Matlab/Octave versus C Alan Feuerbacher Newbie Question on R versus Matlab/Octave versus C Jim Lemon troubleshooting data structure to run krippendorff's alpha Alan Feuerbacher Newbie Question on R versus Matlab/Octave versus C Alan Feuerbacher Newbie Question on R versus Matlab/Octave versus C Jim Lemon troubleshooting data structure to run krippendorff's alpha Bhubaneswor Dhakal R code for fixed effect multinomial logistic regression and experimental data Hanna Heckendorf Help: mediation with multiply imputed data Bert Gunter how to ref data directly from bls.gov using their api Evans, Richard K. (GRC-H000) how to ref data directly from bls.gov using their api Hallie Kamesch troubleshooting data structure to run krippendorff's alpha Frank E Harrell Jr Significant Update to Hmisc Package Gabor Grothendieck Newbie Question on R versus Matlab/Octave versus C PIKAL Petr Your input

Monday, January 28, 2019 23 emails

Sunday, January 27, 2019 13 emails

Jeff Newmiller troubleshooting data structure to run krippendorff's alpha PIKAL Petr Requested r code and references for doing network analysis with experimental data Jeff Newmiller positive deviance plot for Binomial distribution Jaromil Frossard permuco: permutation tests and multiple comparisons. Jeff Newmiller cumulative data monthly Bhubaneswor Dhakal Requested r code and references for doing network analysis with experimental data Diego Avesani cumulative data monthly Lorenzo Isella Purr and Basic Functional Programming Tasks Jeff Newmiller cumulative data monthly Rui Barradas cumulative data monthly Hallie Kamesch troubleshooting data structure to run krippendorff's alpha Jeff Newmiller cumulative data monthly Diego Avesani cumulative data monthly

Saturday, January 26, 2019 6 emails

Jeff Newmiller Create a new list from selected items in another list Ek Esawi Create a new list from selected items in another list Jeff Newmiller TIme Zone error William Dunlap TIme Zone error Christofer Bogaso TIme Zone error Ivan Krylov Function in default parameter value closing over variables defined later in the enclosing function

Friday, January 25, 2019 9 emails

javad bayat Extract the coordinates of a Polylines greg holly positive deviance plot for Binomial distribution Valerio Leone Sciabolazza how to run a multinomial logistic regression with fixed effects jim holtman Purr and Basic Functional Programming Tasks jim holtman Purr and Basic Functional Programming Tasks Lorenzo Isella Purr and Basic Functional Programming Tasks Jeff Reichman Tukey Test akshay kulkarni lm model...... AbouEl-Makarim Aboueissa Tukey Test

Thursday, January 24, 2019 7 emails

AbouEl-Makarim Aboueissa Tukey Test Richard M. Heiberger Tukey Test Rolf Turner Tukey Test Bert Gunter Tukey Test reichm@@j m@iii@g oii sbcgiob@i@@et Tukey Test Jeff Newmiller Function in default parameter value closing over variables defined later in the enclosing function Ivan Krylov Function in default parameter value closing over variables defined later in the enclosing function

Wednesday, January 23, 2019 28 emails

Aleksandre Gavashelishvili Vectorizing a for-loop for cross-validation in R Ashim Kapoor Unable to compute Confidence Intervals from output from MARSS package greg holly Error "sufficient values in manual scale. 10 needed but only 7 provided" Jeff Newmiller Error "sufficient values in manual scale. 10 needed but only 7 provided" greg holly Error "sufficient values in manual scale. 10 needed but only 7 provided" Ista Zahn read_xl question Langsrud, Øyvind MANOVA for collinear responses with rotation testing (ffmanova) + Synthetic data (RegSDC) Eric Berger Vectorizing a for-loop for cross-validation in R Bill Poling Unable to compute Confidence Intervals from output from MARSS package Bill Poling Unable to compute Confidence Intervals from output from MARSS package Duncan Murdoch Packages Charles C. Berry Vectorizing a for-loop for cross-validation in R Neal Fultz Packages Thomas Subia read_xl question AbouEl-Makarim Aboueissa Packages Jan T. Kim Function in default parameter value closing over variables defined later in the enclosing function Duncan Murdoch Packages AbouEl-Makarim Aboueissa Packages David L Carlson calculating quintile values of numeric data? Duncan Murdoch Function in default parameter value closing over variables defined later in the enclosing function Duncan Murdoch Function in default parameter value closing over variables defined later in the enclosing function Bill Poling large number of scrollable histograms.... akshay kulkarni large number of scrollable histograms.... Jan T. Kim Function in default parameter value closing over variables defined later in the enclosing function Aleksandre Gavashelishvili Vectorizing a for-loop for cross-validation in R Ivan Krylov Function in default parameter value closing over variables defined later in the enclosing function PIKAL Petr large number of scrollable histograms.... Alexandros Kouretsis calculating quintile values of numeric data? Alexandros Kouretsis

Tuesday, January 22, 2019 9 emails

akshay kulkarni large number of scrollable histograms.... Jeff Newmiller calculating quintile values of numeric data? Ashim Kapoor Unable to compute Confidence Intervals from output from MARSS package Kelly Thompson calculating quintile values of numeric data? Jeff Newmiller large number of scrollable histograms.... Enrico Schumann large number of scrollable histograms.... Eric Berger large number of scrollable histograms.... PIKAL Petr large number of scrollable histograms.... akshay kulkarni large number of scrollable histograms....

Monday, January 21, 2019 12 emails

Boris Steipe Mismatch distribution Myriam Croze Mismatch distribution Sebastian Heyneman R: plot partial effects Boris Steipe Mismatch distribution Bert Gunter Mismatch distribution Myriam Croze Mismatch distribution Richard Sherman Choropleth using ggplot2 John Fox adding a hex sticker to a package Bert Gunter adding a hex sticker to a package Terry Therneau adding a hex sticker to a package S Ellison Printing a list of simultaneous equations Elahe chalabi Prediction model in Shiny App

Sunday, January 20, 2019 11 emails

Jeff Newmiller Opening R Jeff Newmiller data transformation David L Carlson Opening R Richard M. Heiberger data transformation David L Carlson data transformation Adrian Johnson data transformation Adrian Johnson data transformation Peter Waltman Was there a change to R ver. 3.5.2 so that it now treats warnings during installs as errors? Martin Morgan Was there a change to R ver. 3.5.2 so that it now treats warnings during installs as errors? Duncan Murdoch Was there a change to R ver. 3.5.2 so that it now treats warnings during installs as errors? Eric Berger Opening R

Saturday, January 19, 2019 4 emails

Peter Waltman Was there a change to R ver. 3.5.2 so that it now treats warnings during installs as errors? Sydney Torbett Opening R Michael Friendly Tinn-R: new website under https protocol / fortune nomination Michael Friendly Printing a list of simultaneous equations

Friday, January 18, 2019 14 emails

Jose Claudio Faria Tinn-R: new website under https protocol Hans W Borchers CRAN package NlcOptim query Michael Dewey A priori contrast for binomial GLM John Fox importing data error question Sorkin, John Printing a list of simultaneous equations Martin Maechler I can't get seq to behave how I think it should Jeff Newmiller Printing a list of simultaneous equations Caroline Nested mixed effectts question S Ellison Printing a list of simultaneous equations John Fox importing data error question Sorkin, John Printing a list of simultaneous equations S Ellison Colors on box plots in ggplot Phillip Alday Nested mixed effectts question Rula Domínguez A priori contrast for binomial GLM

Thursday, January 17, 2019 27 emails

Wednesday, January 16, 2019 24 emails

John Fox importing data error question John Fox importing data error question reichm@@j m@iii@g oii sbcgiob@i@@et Confusion Table reichm@@j m@iii@g oii sbcgiob@i@@et Confusion Table Jeff Newmiller Confusion Table Peter Langfelder Confusion Table reichm@@j m@iii@g oii sbcgiob@i@@et Confusion Table Kevin Wamae create groups from data with duplicates, such that each group has a duplicate represented once Bert Gunter R Companion to Linear Statistical Models by KNNL 우지희 importing data error question AbouEl-Makarim Aboueissa R Companion to Linear Statistical Models by KNNL Emily Wan Error with install.packages using R v 3.5.1 and 3.5.2 Jeff Newmiller R help: fviz_nbclust’ is not available (for R version 3.5.2) N Meriam R help: fviz_nbclust’ is not available (for R version 3.5.2) Henrik Bengtsson Error with install.packages using R v 3.5.1 and 3.5.2 Jeff Newmiller R help: fviz_nbclust’ is not available (for R version 3.5.2) Sarah Goslee R help: fviz_nbclust’ is not available (for R version 3.5.2) Jeff Newmiller Error with install.packages using R v 3.5.1 and 3.5.2 Peter Dalgaard NA rows appeared in data.frame N Meriam R help: fviz_nbclust’ is not available (for R version 3.5.2) Emily Wan Error with install.packages using R v 3.5.1 and 3.5.2 John Fox importing data error question Eric Berger Operator Overloading in R Mahnoor Malik Operator Overloading in R

Tuesday, January 15, 2019 13 emails

PIKAL Petr NA rows appeared in data.frame Ernest Han NA rows appeared in data.frame Jeff Newmiller Error with install.packages using R v 3.5.1 and 3.5.2 Rick Van Camp Rserve - Request assistance with installation, confirmation thereof and starting (R 3.5.1 on 64-bit Win7 Pro) Emily Wan Error with install.packages using R v 3.5.1 and 3.5.2 David L Carlson Banner using R Caroline Nested mixed effectts question Peter Dalgaard Calculating F values for lme function Luca Meyer Banner using R Bert Gunter Calculating F values for lme function Jeff Newmiller Calculating F values for lme function Hans W Borchers CRAN package NlcOptim query Sigbert Klinke do.call, browser and traceback

Monday, January 14, 2019 12 emails

John Fox importing data error question 우지희 importing data error question William Michels loading the xlsx library John Fox importing data error question Eric Berger Extrapolate x values from a defined y sequence lionel sicot Extrapolate x values from a defined y sequence S Ellison NA rows appeared in data.frame S Ellison Tinn-R: new web site aveek CRAN package NlcOptim query Eric Berger CRAN package NlcOptim query aveek CRAN package NlcOptim query PIKAL Petr NA rows appeared in data.frame

Sunday, January 13, 2019 2 emails

우지희 importing data error question Axel Urbiz mgcv::bam with monotonic constraints

Saturday, January 12, 2019 11 emails

Peter Langfelder randomForest out of bag prediction Bert Gunter randomForest out of bag prediction Michael Mayer randomForest out of bag prediction Medic SURVDIFF() Witold E Wolski randomForest out of bag prediction David Winsemius SURVDIFF() varin sacha Visreg package : Legend to large and 3 ways-interactions possible ? varin sacha mgcv : 3-way interaction and 3D-plots ? Rui Barradas NA rows appeared in data.frame Medic SURVDIFF() Ernest Han NA rows appeared in data.frame

Friday, January 11, 2019 15 emails

Jim Lemon Overlapping legend in a circular dendrogram Jose Claudio Faria Tinn-R: new web site Rui Barradas loading the xlsx library N Meriam Overlapping legend in a circular dendrogram Bert Gunter Overlapping legend in a circular dendrogram N Meriam Overlapping legend in a circular dendrogram Jeff Newmiller loading the xlsx library Bernard McGarvey loading the xlsx library N Meriam Overlapping legend in a circular dendrogram Siegfried Köstlmeier New package qrandom: True random numbers John Fox importing data error question Greg Dropkin bsts posterior distributions Ivan Krylov User Interfaces for R PIKAL Petr importing data error question 우지희 importing data error question

Thursday, January 10, 2019 27 emails

Duncan Murdoch User Interfaces for R Bert Gunter (no subject) Sam Albers (no subject) rsherry8 Reading an excel file Albrecht Kauffmann Reading an excel file Bert Gunter Reading an excel file Hasan Diwan Reading an excel file Bernard McGarvey Reading an excel file Ivan Krylov User Interfaces for R N Meriam Overlapping legend in a circular dendrogram Sebastien Bihorel Diff'ing 2 strings David Winsemius Running list of drugs taken and dropped (via Reduce and accumulate = TRUE or by other means) William Dunlap Diff'ing 2 strings Bert Gunter Diff'ing 2 strings Duncan Murdoch Diff'ing 2 strings Sebastien Bihorel Diff'ing 2 strings Jeff Newmiller Diff'ing 2 strings Bert Gunter Seeking help for using optim for MLE in R Sebastien Bihorel Diff'ing 2 strings Paul Miller Running list of drugs taken and dropped (via Reduce and accumulate = TRUE or by other means) Eric Berger User Interfaces for R John Hillier Resampling 1 time series at another set of (known) irregularly spaced times Martin Møller Skarbiniks Pedersen Diff'ing 2 strings Ingmar Visser standard errors in depmixS4 beta version 1.4 on r-forge Naznin Sultana Seeking help for using optim for MLE in R Troels Ring Diff'ing 2 strings Gerrit Eichner Diff'ing 2 strings

Wednesday, January 9, 2019 12 emails

Martin Møller Skarbiniks Pedersen Diff'ing 2 strings Bert Gunter Resampling 1 time series at another set of (known) irregularly spaced times Jeff Newmiller Resampling 1 time series at another set of (known) irregularly spaced times John Hillier Resampling 1 time series at another set of (known) irregularly spaced times Sebastien Bihorel Diff'ing 2 strings Bernard McGarvey User Interfaces for R David L Carlson Warning message: NAs introduced by coercion Maria Eugenia Utgés External validation for a hurdle model (pscl) Hamed Ha Why does R do this? (Duncan Murdoch) PIKAL Petr Warning message: NAs introduced by coercion PIKAL Petr Warning message: NAs introduced by coercion PIKAL Petr Mailinglist

Tuesday, January 8, 2019 34 emails

PIKAL Petr error in plotting model from kernlab N Meriam R help: circular dendrogram N Meriam Warning message: NAs introduced by coercion Jeff Newmiller objects are masked _by_ '.GlobalEnv' Jeff Newmiller External validation for a hurdle model (pscl) David L Carlson Warning message: NAs introduced by coercion Jeff Newmiller Question Troels Ring objects are masked _by_ '.GlobalEnv' N Meriam Warning message: NAs introduced by coercion Rich Shepard Question Rich Shepard Question Marc Schwartz Question Priyanka Purkayastha Recursive feature elimination keeping the weights constant Bert Gunter External validation for a hurdle model (pscl) Bert Gunter Question Rich Shepard Question Michael Dewey Warning message: NAs introduced by coercion Richard M. Heiberger Mailinglist Maria Eugenia Utgés External validation for a hurdle model (pscl) Luigi Marongiu error in plotting model from kernlab N Meriam Warning message: NAs introduced by coercion Rachel Thompson Mailinglist Rachel Thompson Mailinglist Rachel Thompson Mailinglist Rachel Thompson Mailinglist PIKAL Petr error in plotting model from kernlab PIKAL Petr Warning message: NAs introduced by coercion Sarah Goslee Question N Meriam Warning message: NAs introduced by coercion Duncan Murdoch Why does R do this? S. Mahmoud Nasrollahi Question PIKAL Petr Why does R do this? Thierry Onkelinx Why does R do this? Nick Wray Why does R do this?

Monday, January 7, 2019 16 emails

Richard M. Heiberger mgcv : 3-way interaction and 3D-plots ? David Winsemius mgcv : 3-way interaction and 3D-plots ? varin sacha mgcv : 3-way interaction and 3D-plots ? varin sacha Fit CMARS with R possible (Packages) ? Luigi Marongiu error in plotting model from kernlab David L Carlson Merge the data from multiple text files Jeff Newmiller Merge the data from multiple text files Jeff Newmiller error in plotting model from kernlab Highland Statistics Ltd Two statistics courses in Lisbon Priya Arasu Merge the data from multiple text files Luigi Marongiu error in plotting model from kernlab Lisa Snel How to perform Mixed Design ANOVA on MICE imputed dataset in R? Andras Farkas data frame transformation PIKAL Petr Mailinglist Hasan Diwan Mailinglist PIKAL Petr Mailinglist

Sunday, January 6, 2019 21 emails

K. Elo Mailinglist Jeff Newmiller Need help for logical expression roslinazairimah zakaria Need help for logical expression Richard M. Heiberger Mailinglist Rich Shepard Mailinglist Hasan Diwan Mailinglist Rachel Thompson Mailinglist Rachel Thompson Mailinglist Bert Gunter data frame transformation Christofer Bogaso Webshot failed to take snapshot in Ubuntu machine Bert Gunter data frame transformation Rui Barradas Mailinglist Rich Shepard Mailinglist Rachel Thompson Mailinglist Michael Dewey Mailinglist Rachel Thompson Mailinglist Rachel Thompson Mailinglist Jeff Newmiller Mailinglist K. Elo data frame transformation Andras Farkas data frame transformation Jim Lemon Mailinglist

Saturday, January 5, 2019 21 emails

Jim Lemon Mailinglist Jeff Newmiller Mailinglist David L Carlson Merge the data from multiple text files Stanislav Syekirin New package readABF for reading Axon Binary Files Dirk Eddelbuettel g++ error causes non-zero exit status for package installation Henrik Bengtsson g++ error causes non-zero exit status for package installation Dirk Eddelbuettel g++ error causes non-zero exit status for package installation Winfried Moser g++ error causes non-zero exit status for package installation David Winsemius Merge the data from multiple text files Dirk Eddelbuettel g++ error causes non-zero exit status for package installation Bert Gunter Diff'ing 2 strings William Dunlap g++ error causes non-zero exit status for package installation Priya Arasu Merge the data from multiple text files Bert Gunter Diff'ing 2 strings Rich Shepard CRAN updates Nadia Tsvetkov Sciplot bargraph.CI err.lty not working Dirk Eddelbuettel Failed to install RQuantLib in Ubuntu machine Dirk Eddelbuettel g++ error causes non-zero exit status for package installation Dirk Eddelbuettel CRAN updates Sebastien Bihorel Diff'ing 2 strings Rich Shepard CRAN updates

Friday, January 4, 2019 11 emails

Marc Schwartz Fit CMARS with R possible (Packages) ? Winfried Moser g++ error causes non-zero exit status for package installation Bert Gunter Fit CMARS with R possible (Packages) ? varin sacha Fit CMARS with R possible (Packages) ? Rachel Thompson Mailinglist Greg Snow Accessing Data Frame David Smith Revolutions blog: December 2018 roundup Bert Gunter How to perform Mixed Design ANOVA on MICE imputed dataset in R? William Dunlap Error in names(x) <- value: 'names' attribute must be the same length as the vector in gam function Lisa Snel How to perform Mixed Design ANOVA on MICE imputed dataset in R? Ista Zahn How to perform Mixed Design ANOVA on MICE imputed dataset in R?

Thursday, January 3, 2019 20 emails

Wednesday, January 2, 2019 10 emails

Jim Lemon Plotting rgb proportions in R Christofer Bogaso Failed to install RQuantLib in Ubuntu machine Duncan Murdoch Function for displaying arbitrary text as in 'help'. Nicolás San Martín Function for displaying arbitrary text as in 'help'. Nicolás San Martín Function for displaying arbitrary text as in 'help'. Jeff Newmiller Function for displaying arbitrary text as in 'help'. Duncan Murdoch Function for displaying arbitrary text as in 'help'. Duncan Murdoch Function for displaying arbitrary text as in 'help'. Bert Gunter Recursive Feature Elimination with SVM Nicolás San Martín Function for displaying arbitrary text as in 'help'.

Tuesday, January 1, 2019 7 emails

Priyanka Purkayastha Recursive Feature Elimination with SVM David Winsemius Recursive Feature Elimination with SVM Priyanka Purkayastha Recursive Feature Elimination with SVM Rolf Turner SE for all fixed factor effect in GLMM Rolf Turner SE for all fixed factor effect in GLMM David Winsemius Recursive Feature Elimination with SVM Priyanka Purkayastha Recursive Feature Elimination with SVM

R-help January 2019