Message-ID: <8B55112E-C516-4D19-B243-4309D667EACA@dcn.davis.ca.us>
Date: 2019-01-15T21:51:52Z
From: Jeff Newmiller
Subject: Error with install.packages using R v 3.5.1 and 3.5.2
In-Reply-To: <CABAC6SYWCxKwtDVKqrW+Gh6itj-vPQ4c8sGRTZitB=FokH4NdA@mail.gmail.com>
Please ask questions about Bioconductor on the Bioconductor forum [1].
Chances are that you need to re-install Bioconductor because packages are installed in two-digit version-specific libraries... e.g. R 3.4 and R 3.5 do not share packages.
[1] https://support.bioconductor.org
On January 15, 2019 11:51:16 AM PST, Emily Wan <reesw at channing.harvard.edu> wrote:
>Hi -
>I am working with R on a Window Server 2012 R2 - I had originally
>installed
>R (v3.5.1) in September/October 2018 and have used multiple packages
>without incident. However, last week, when attempting to install
>additional
>packages (using install.packages() or Bioconductor's
>BiocManager::install()
>wrapper), I kept on receiving the following error message:
>
>Error in if (any(diff)) { : missing value where TRUE/FALSE needed
>
>I have searched the prior threads on this topic (including the issue
>reported with R v3.4.0 which required a patch), rebooted my server, and
>actually uninstalled R v3.5.1 and upgraded to v3.5.2 but am still
>receiving
>the same error message when I attempt to install *any* package.
>Please let me know what additional details I can provide to assist with
>troubleshooting. Thank you.
--
Sent from my phone. Please excuse my brevity.