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R-SIG-mixed-models July 2011

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Analysing insecticide biossays using lmer

1 msg
pierrick.labbe at univ-montp2.fr Analysing insecticide biossays using lmer Jul 1, 2011

Bayesian Hierarchical Model - Estimating Rho (correlation between intercepts and slopes)

2 msgs
Xavier Harrison Bayesian Hierarchical Model - Estimating Rho (correlation between intercepts and slopes) Jul 11, 2011 Jarrod Hadfield Bayesian Hierarchical Model - Estimating Rho (correlation between intercepts and slopes) Jul 11, 2011

Cholmod warning

3 msgs
Iker Vaquero Alba Cholmod warning Jul 24, 2011 Douglas Bates Cholmod warning Jul 24, 2011 Iker Vaquero Alba Cholmod warning Jul 24, 2011

Compare goodness of fit between models

2 msgs
Sverre Stausland Compare goodness of fit between models Jul 20, 2011 David Duffy Compare goodness of fit between models Jul 21, 2011

Confusion about contrasts

2 msgs
Marius Confusion about contrasts Jul 17, 2011 Reinhold Kliegl Confusion about contrasts Jul 17, 2011

Doubts regarding lmer's fitted model form

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Krishnaraj Ajay Gharpure Doubts regarding lmer's fitted model form Jul 12, 2011

Fitting piecewise linear models with lmer

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Alex Fitting piecewise linear models with lmer Jul 19, 2011

GLS - Plotting Graphs with 95% conf interval

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SamiC GLS - Plotting Graphs with 95% conf interval Jul 12, 2011

Help with anova result for model comparison

2 msgs
Catarina Miranda Help with anova result for model comparison Jul 8, 2011 Ben Bolker Help with anova result for model comparison Jul 8, 2011

How can parameter estimates be extracted from a LMEM which includes VarIdent and corAR1?

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Lisa Stevens How can parameter estimates be extracted from a LMEM which includes VarIdent and corAR1? Jul 15, 2011 Christopher Philipson How can parameter estimates be extracted from a LMEM which includes VarIdent and corAR1? Jul 17, 2011

How do you report lmer results?

3 msgs
Luke Duncan How do you report lmer results? Jul 27, 2011 Ben Bolker How do you report lmer results? Jul 28, 2011 Andy Fugard How do you report lmer results? Jul 28, 2011

How to select (and nest) covariates in a crossed design model?

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Mari Laine How to select (and nest) covariates in a crossed design model? Jul 15, 2011 Dennis Murphy How to select (and nest) covariates in a crossed design model? Jul 15, 2011 Mari Laine How to select (and nest) covariates in a crossed design model? Jul 15, 2011

Including groups as levels and groups as dummies simultaneously

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David Llanos Including groups as levels and groups as dummies simultaneously Jul 18, 2011

Interesting Paper(s)

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Viechtbauer Wolfgang (STAT) Interesting Paper(s) Jul 15, 2011

LME and overall treatment contrasts / estimates

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Mark Bilton LME and overall treatment contrasts / estimates Jul 15, 2011

MCMCglmm and phylogeny - huge variance problem

6 msgs
Szymek Drobniak MCMCglmm and phylogeny - huge variance problem Jul 6, 2011 Jarrod Hadfield MCMCglmm and phylogeny - huge variance problem Jul 6, 2011 Szymek Drobniak MCMCglmm and phylogeny - huge variance problem Jul 6, 2011 Jarrod Hadfield MCMCglmm and phylogeny - huge variance problem Jul 6, 2011 Jarrod Hadfield MCMCglmm and phylogeny - huge variance problem Jul 6, 2011 Szymek Drobniak MCMCglmm and phylogeny - huge variance problem Jul 7, 2011

MCMCglmm: correslation between variables two variables in repeated measure?

3 msgs
Ndjido Ardo BAR MCMCglmm: correslation between variables two variables in repeated measure? Jul 3, 2011 Jarrod Hadfield MCMCglmm: correslation between variables two variables in repeated measure? Jul 3, 2011 Ben Bolker MCMCglmm: correslation between variables two variables in repeated measure? Jul 4, 2011

MCMCglmm_2.13

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Jarrod Hadfield MCMCglmm_2.13 Jul 25, 2011 Malcolm Fairbrother MCMCglmm_2.13 Jul 27, 2011 Jarrod Hadfield MCMCglmm_2.13 Jul 28, 2011 Malcolm Fairbrother MCMCglmm_2.13 Jul 28, 2011 Jarrod Hadfield MCMCglmm_2.13 Jul 29, 2011

Matched-Pair Cluster Randomized Trials

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Mathieu Maheu-Giroux Matched-Pair Cluster Randomized Trials Jul 15, 2011 Dennis Murphy Matched-Pair Cluster Randomized Trials Jul 15, 2011

Matrix affecting lme4

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Ben Bolker Matrix affecting lme4 Jul 11, 2011

Mixed model with counts data

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David Duffy Mixed model with counts data Jul 4, 2011

Model specification for usual data structure

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Benjamin J. Ciotti Model specification for usual data structure Jul 7, 2011

Multilevel multivariate meta-regression

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Vincenzo Barbaro Multilevel multivariate meta-regression Jul 5, 2011 Bernd Weiss Multilevel multivariate meta-regression Jul 5, 2011 Mike Cheung Multilevel multivariate meta-regression Jul 5, 2011 Mike Cheung Multilevel multivariate meta-regression Jul 5, 2011

Problem with library(lme4a)

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Ben Bolker Problem with library(lme4a) Jul 9, 2011 Ben Bolker Problem with library(lme4a) Jul 9, 2011 Ben Bolker Problem with library(lme4a) Jul 9, 2011 zListserv Problem with library(lme4a) Jul 12, 2011 zListserv Problem with library(lme4a) Jul 12, 2011 zListserv Problem with library(lme4a) Jul 12, 2011 Hadley Wickham Problem with library(lme4a) Jul 12, 2011 zListserv Problem with library(lme4a) Jul 13, 2011

R-Forge lme4/lme4a installation on Windows 7

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Simon Delisle-Boulianne R-Forge lme4/lme4a installation on Windows 7 Jul 20, 2011 Dieter Menne R-Forge lme4/lme4a installation on Windows 7 Jul 21, 2011 David Winsemius R-Forge lme4/lme4a installation on Windows 7 Jul 21, 2011 Dennis Murphy R-Forge lme4/lme4a installation on Windows 7 Jul 21, 2011

RLRsim masked VarCorr

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Mollie Brooks RLRsim masked VarCorr Jul 25, 2011 ONKELINX, Thierry RLRsim masked VarCorr Jul 26, 2011

Repeated measures ANOVA using lmer, nlme, and geepack

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Paul Miller Repeated measures ANOVA using lmer, nlme, and geepack Jul 28, 2011

Resume terminated lmer fit if verbose=TRUE?

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Michael Lawrence Resume terminated lmer fit if verbose=TRUE? Jul 27, 2011 Ben Bolker Resume terminated lmer fit if verbose=TRUE? Jul 27, 2011 Doran, Harold Resume terminated lmer fit if verbose=TRUE? Jul 27, 2011 Ben Bolker Resume terminated lmer fit if verbose=TRUE? Jul 27, 2011 Iker Vaquero Alba Resume terminated lmer fit if verbose=TRUE? Jul 27, 2011 Doran, Harold Resume terminated lmer fit if verbose=TRUE? Jul 27, 2011 Michael Lawrence Resume terminated lmer fit if verbose=TRUE? Jul 27, 2011 Ben Bolker Resume terminated lmer fit if verbose=TRUE? Jul 27, 2011 Dennis Murphy Resume terminated lmer fit if verbose=TRUE? Jul 27, 2011 Michael Lawrence Resume terminated lmer fit if verbose=TRUE? Jul 27, 2011 Michael Lawrence Resume terminated lmer fit if verbose=TRUE? Jul 27, 2011

Specifying a (simple?) two level model

3 msgs
Hans Ekbrand Specifying a (simple?) two level model Jul 1, 2011 Hans Ekbrand Specifying a (simple?) two level model Jul 1, 2011 ONKELINX, Thierry Specifying a (simple?) two level model Jul 1, 2011

Test and account for overdispersion in GLMM - lme4 & glmmML packages.

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Lucas Marie-Orleach Test and account for overdispersion in GLMM - lme4 & glmmML packages. Jul 20, 2011

What is the state of th "Development version"?

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Dieter Menne What is the state of th "Development version"? Jul 22, 2011 Douglas Bates What is the state of th "Development version"? Jul 22, 2011 Dieter Menne What is the state of th "Development version"? Jul 22, 2011 Douglas Bates What is the state of th "Development version"? Jul 22, 2011 Kurt Hornik What is the state of th "Development version"? Jul 23, 2011 Dieter Menne What is the state of th "Development version"? Jul 25, 2011

a question about glht function

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Lao Meng a question about glht function Jul 26, 2011

alternative to gams for smoothed terms? - modelling approach suggestions please

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Rafael Mares alternative to gams for smoothed terms? - modelling approach suggestions please Jul 26, 2011

estimating evidence: practical bridge / importance sampling code?

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Ryan King estimating evidence: practical bridge / importance sampling code? Jul 21, 2011

fixed effects clarification/confirmation (ZIP model)

3 msgs
Ned Dochtermann fixed effects clarification/confirmation (ZIP model) Jul 7, 2011 Jarrod Hadfield fixed effects clarification/confirmation (ZIP model) Jul 11, 2011 Ned Dochtermann fixed effects clarification/confirmation (ZIP model) Jul 11, 2011

handling overdispersion in poisson random effects models

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O'Reilly, Kathleen M handling overdispersion in poisson random effects models Jul 1, 2011 Jarrod Hadfield handling overdispersion in poisson random effects models Jul 1, 2011 David Duffy handling overdispersion in poisson random effects models Jul 1, 2011

including covariance pattern in a nlme model

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ONKELINX, Thierry including covariance pattern in a nlme model Jul 4, 2011

interactions with a smoothed term in a gam

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Rafael Mares interactions with a smoothed term in a gam Jul 14, 2011 Ben Bolker interactions with a smoothed term in a gam Jul 14, 2011 Rafael Mares interactions with a smoothed term in a gam Jul 14, 2011

lack of convergence

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Mike Gibson lack of convergence Jul 8, 2011 Douglas Bates lack of convergence Jul 8, 2011 Mike Gibson lack of convergence Jul 8, 2011 Highland Statistics Ltd lack of convergence Jul 9, 2011

lme predict function

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HARSHANA KIRIELLA lme predict function Jul 30, 2011

lme4 error: "Number of levels of a grouping factor . . ."

6 msgs
Gabrielle Miller-Messner lme4 error: "Number of levels of a grouping factor . . ." Jul 26, 2011 Martin Maechler lme4 error: "Number of levels of a grouping factor . . ." Jul 27, 2011 Ben Bolker lme4 error: "Number of levels of a grouping factor . . ." Jul 27, 2011 Brent Pedersen lme4 error: "Number of levels of a grouping factor . . ." Jul 27, 2011 Ben Bolker lme4 error: "Number of levels of a grouping factor . . ." Jul 27, 2011 Brent Pedersen lme4 error: "Number of levels of a grouping factor . . ." Jul 27, 2011

lme4a crash - adding factors to a non-linear derivative expression

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Christopher Philipson lme4a crash - adding factors to a non-linear derivative expression Jul 4, 2011

multicore lmer: any changes since 2007?

8 msgs
Michael Lawrence multicore lmer: any changes since 2007? Jul 5, 2011 Douglas Bates multicore lmer: any changes since 2007? Jul 6, 2011 Michael Lawrence multicore lmer: any changes since 2007? Jul 6, 2011 Ben Bolker multicore lmer: any changes since 2007? Jul 6, 2011 Douglas Bates multicore lmer: any changes since 2007? Jul 6, 2011 Liaw, Andy multicore lmer: any changes since 2007? Jul 6, 2011 Ben Bolker multicore lmer: any changes since 2007? Jul 6, 2011 Ben Bolker multicore lmer: any changes since 2007? Jul 6, 2011

predict in lmer()?

10 msgs
Ewart Thomas predict in lmer()? Jul 30, 2011 Ewart Thomas predict in lmer()? Jul 30, 2011 David Winsemius predict in lmer()? Jul 30, 2011 Dennis Murphy predict in lmer()? Jul 31, 2011 David Winsemius predict in lmer()? Jul 31, 2011 Ewart Thomas predict in lmer()? Jul 31, 2011 David Winsemius predict in lmer()? Jul 31, 2011 David Winsemius predict in lmer()? Jul 31, 2011 Douglas Bates predict in lmer()? Jul 31, 2011 David Winsemius predict in lmer()? Jul 31, 2011

question about VarCorr

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Jeffrey Harring question about VarCorr Jul 13, 2011

question about linear mixed model

4 msgs
Lao Meng question about linear mixed model Jul 18, 2011 Yuan-Ye Zhang question about linear mixed model Jul 19, 2011 Lao Meng question about linear mixed model Jul 21, 2011 Lao Meng question about linear mixed model Jul 27, 2011

question about the lme result

6 msgs
Lao Meng question about the lme result Jul 27, 2011 ONKELINX, Thierry question about the lme result Jul 27, 2011 Lao Meng question about the lme result Jul 27, 2011 ONKELINX, Thierry question about the lme result Jul 27, 2011 Lao Meng question about the lme result Jul 27, 2011 Lao Meng question about the lme result Jul 27, 2011

r-sig-mixed-models@r-project.org

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German Garcia r-sig-mixed-models@r-project.org Jul 14, 2011

spatial modelling Lectureship at the University of Bristol

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Malcolm Fairbrother spatial modelling Lectureship at the University of Bristol Jul 7, 2011

using lmer instead of 2-way repeated measure ANOVA for categorical response data

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Ben Bolker using lmer instead of 2-way repeated measure ANOVA for categorical response data Jul 4, 2011

using lmer instead of 2-way repeated measure ANOVA for categorical response data

3 msgs
Stefano Guidi using lmer instead of 2-way repeated measure ANOVA for categorical response data Jul 4, 2011 David Duffy using lmer instead of 2-way repeated measure ANOVA for categorical response data Jul 4, 2011 Robert Kushler using lmer instead of 2-way repeated measure ANOVA for categorical response data Jul 4, 2011