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R-SIG-mixed-models November 2011

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lmer model specification
1 msg
jude girard lmer model specification Nov 30, 2011
Varying slopes in a multilevel model with a between subjects treatment
1 msg
Derek Dunfield Varying slopes in a multilevel model with a between subjects treatment Nov 30, 2011
Hi
1 msg
Douglas Bates Hi Nov 30, 2011
Error when installing the glmmADMB package
2 msgs
Juan Santos Error when installing the glmmADMB package Nov 30, 2011
Ben Bolker Error when installing the glmmADMB package Nov 30, 2011
taking in account results of a gmml in despite, of error warning about memory?
1 msg
ONKELINX, Thierry taking in account results of a gmml in despite, of error warning about memory? Nov 30, 2011
taking in account results of a gmml in despite, of error warning about memory?
1 msg
Chris Howden taking in account results of a gmml in despite, of error warning about memory? Nov 29, 2011
taking in account results of a gmml in despite, of error warning about memory?
1 msg
Chris Howden taking in account results of a gmml in despite, of error warning about memory? Nov 29, 2011
Error in nlmer gradient must be of size...
5 msgs
Luciano Selzer Error in nlmer gradient must be of size... Nov 9, 2011
Luciano Selzer Error in nlmer gradient must be of size... Nov 9, 2011
Luciano Selzer Error in nlmer gradient must be of size... Nov 9, 2011
Ben Bolker Error in nlmer gradient must be of size... Nov 12, 2011
Luciano Selzer Error in nlmer gradient must be of size... Nov 29, 2011
ANCOVA with repeated measures
5 msgs
Ricardo Solar ANCOVA with repeated measures Nov 28, 2011
Ben Bolker ANCOVA with repeated measures Nov 29, 2011
Ricardo Solar ANCOVA with repeated measures Nov 29, 2011
Ben Bolker ANCOVA with repeated measures Nov 29, 2011
Ricardo Solar ANCOVA with repeated measures Nov 29, 2011
taking in account results of a gmml in despite of error warning about memory?
4 msgs
glenda mendieta taking in account results of a gmml in despite of error warning about memory? Nov 28, 2011
Ben Bolker taking in account results of a gmml in despite of error warning about memory? Nov 28, 2011
Chris Howden taking in account results of a gmml in despite of error warning about memory? Nov 28, 2011
ONKELINX, Thierry taking in account results of a gmml in despite of error warning about memory? Nov 29, 2011
Count GLMM ms and R code
1 msg
David Atkins Count GLMM ms and R code Nov 28, 2011
linear mixed model
1 msg
Kret, Mariska linear mixed model Nov 28, 2011
Population fit with glm works fine: totally off with glmer
2 msgs
Ben Bolker Population fit with glm works fine: totally off with glmer Nov 26, 2011
Dieter Menne Population fit with glm works fine: totally off with glmer Nov 28, 2011
errors with lme4
2 msgs
Ben Bolker errors with lme4 Nov 26, 2011
Ben Bolker errors with lme4 Nov 26, 2011
Population fit with glm works fine: totally off with glmer
1 msg
Dieter Menne Population fit with glm works fine: totally off with glmer Nov 26, 2011
papers about using MCMC in ecological study
1 msg
Koster, Jeremy (kosterjy) papers about using MCMC in ecological study Nov 25, 2011
papers about using MCMC in ecological study
1 msg
Jakub Szymkowiak papers about using MCMC in ecological study Nov 25, 2011
Data nested and spatial auto-correlation
1 msg
Izaias Fernandes Data nested and spatial auto-correlation Nov 25, 2011
UNSOLVED: Re: lme4 or other open source mixed model package code equivalent to asreml-R
6 msgs
John Clark UNSOLVED: Re: lme4 or other open source mixed model package code equivalent to asreml-R Nov 17, 2011
David Duffy UNSOLVED: Re: lme4 or other open source mixed model package code equivalent to asreml-R Nov 17, 2011
Ben Bolker UNSOLVED: Re: lme4 or other open source mixed model package code equivalent to asreml-R Nov 18, 2011
David Duffy UNSOLVED: Re: lme4 or other open source mixed model package code equivalent to asreml-R Nov 19, 2011
David Duffy Comparison of lme4, geepack for binary correlated variables Nov 20, 2011
Ben Bolker UNSOLVED: Re: lme4 or other open source mixed model package code equivalent to asreml-R Nov 24, 2011
errors with lme4
1 msg
Ben Bolker errors with lme4 Nov 24, 2011
glmer and glmmPQL
2 msgs
Raquel Benavides glmer and glmmPQL Nov 23, 2011
ONKELINX, Thierry glmer and glmmPQL Nov 24, 2011
matched pair analysis?
2 msgs
Ryan King matched pair analysis? Nov 20, 2011
David Duffy matched pair analysis? Nov 23, 2011
[ADMB Users] negative binomial mixed model with crossed and random effects
2 msgs
Sharif S. Aly negative binomial mixed model with crossed and random effects Nov 23, 2011
Ben Bolker negative binomial mixed model with crossed and random effects Nov 23, 2011
Very large HPDintervals, mcmcsamp, lmer
4 msgs
Colin Wahl Very large HPDintervals, mcmcsamp, lmer Nov 21, 2011
ONKELINX, Thierry Very large HPDintervals, mcmcsamp, lmer Nov 22, 2011
Ben Bolker Very large HPDintervals, mcmcsamp, lmer Nov 22, 2011
Julio Alejandro Di Rienzo Very large HPDintervals, mcmcsamp, lmer Nov 23, 2011
lme4 package
1 msg
Mahmoud Torabi lme4 package Nov 23, 2011
unreplicated repeated measures
2 msgs
Jinsong Zhao unreplicated repeated measures Nov 23, 2011
Jinsong Zhao unreplicated repeated measures Nov 23, 2011
fitted/resid method for lme4a does not work correctly with na.action
1 msg
gregor.hochschild at gmx.de fitted/resid method for lme4a does not work correctly with na.action Nov 23, 2011
4 binary DVs, subjects nested within schools
1 msg
Yvonnick Noel 4 binary DVs, subjects nested within schools Nov 23, 2011
4 binary DVs, subjects nested within schools
7 msgs
Paul Johnson 4 binary DVs, subjects nested within schools Nov 22, 2011
Chris Howden 4 binary DVs, subjects nested within schools Nov 22, 2011
John Maindonald 4 binary DVs, subjects nested within schools Nov 22, 2011
Paul Johnson 4 binary DVs, subjects nested within schools Nov 22, 2011
John Maindonald 4 binary DVs, subjects nested within schools Nov 22, 2011
Chris Howden 4 binary DVs, subjects nested within schools Nov 22, 2011
David Duffy 4 binary DVs, subjects nested within schools Nov 22, 2011
error loading lme4a (and b)
5 msgs
Robert Kushler error loading lme4a (and b) Nov 21, 2011
Renaud Lancelot error loading lme4a (and b) Nov 21, 2011
Dennis Murphy error loading lme4a (and b) Nov 22, 2011
Robert Kushler error loading lme4a (and b) Nov 22, 2011
Thomas Petzoldt error loading lme4a (and b) Nov 22, 2011
how to look at the effect of a variable I need to control for
3 msgs
glenda mendieta how to look at the effect of a variable I need to control for Nov 18, 2011
Andrew Miles how to look at the effect of a variable I need to control for Nov 18, 2011
glenda mendieta how to look at the effect of a variable I need to control for/ random effects Nov 22, 2011
random factor selection
2 msgs
Kirstin-Friederike Heise random factor selection Nov 20, 2011
Ben Bolker random factor selection Nov 20, 2011
problem with lme4a on mac: libRlapack.dylib not found
2 msgs
gregor.hochschild at gmx.de problem with lme4a on mac: libRlapack.dylib not found Nov 19, 2011
David Winsemius problem with lme4a on mac: libRlapack.dylib not found Nov 20, 2011
GLMM with Poisson
2 msgs
Zofia Ecaterina Taranu GLMM with Poisson Nov 16, 2011
Ben Bolker GLMM with Poisson Nov 18, 2011
repeated measurement using mixed model
3 msgs
Jinsong Zhao repeated measurement using mixed model Nov 17, 2011
Christoph Scherber repeated measurement using mixed model Nov 18, 2011
Jinsong Zhao repeated measurement using mixed model Nov 18, 2011
does this lme model work?
1 msg
Alen Hajnal does this lme model work? Nov 18, 2011
account for temporal correlation
2 msgs
matteo dossena account for temporal correlation Nov 18, 2011
Ben Bolker account for temporal correlation Nov 18, 2011
weighted mixed model regression
2 msgs
AC Del Re weighted mixed model regression Nov 18, 2011
Ben Pelzer lmer (non)convergence and verbose results Nov 18, 2011
weighted mixed model regression
2 msgs
Ahmad Rabiee weighted mixed model regression Nov 17, 2011
Dennis Murphy weighted mixed model regression Nov 18, 2011
mixed zero-inflated poisson regression
7 msgs
Ivar Herfindal mixed zero-inflated poisson regression Nov 14, 2011
ONKELINX, Thierry mixed zero-inflated poisson regression Nov 14, 2011
Ivar Herfindal mixed zero-inflated poisson regression Nov 14, 2011
Jarrod Hadfield mixed zero-inflated poisson regression Nov 14, 2011
Denise Rocha mixed zero-inflated poisson regression Nov 16, 2011
Jarrod Hadfield mixed zero-inflated poisson regression Nov 16, 2011
Ivar Herfindal mixed zero-inflated poisson regression Nov 17, 2011
goodness of fit
2 msgs
FMH goodness of fit Nov 17, 2011
FMH R2 for a mixed model with AR(1) error structure Nov 17, 2011
Granger's causality test
1 msg
rafleon at highstat.cl Granger's causality test Nov 16, 2011
Anova and random effects
1 msg
Flores-de-Gracia, Eric Anova and random effects Nov 16, 2011
Variance structure and random effects using lme, , what's the difference?
1 msg
Highland Statistics Ltd Variance structure and random effects using lme, , what's the difference? Nov 16, 2011
function in R to test the goodness of fit of a linear mixed-effects model
2 msgs
FMH function in R to test the goodness of fit of a linear mixed-effects model Nov 16, 2011
Maria Susana Alvarado Barrientos function in R to test the goodness of fit of a linear mixed-effects model Nov 16, 2011
Variance structure and random effects using lme, what's the difference?
1 msg
Maria Susana Alvarado Barrientos Variance structure and random effects using lme, what's the difference? Nov 16, 2011
goodness of fit
1 msg
FMH goodness of fit Nov 16, 2011
reference on unidentifiability of observation-level variance in Bernoulli variables?
3 msgs
Ben Bolker reference on unidentifiability of observation-level variance in Bernoulli variables? Nov 15, 2011
Kent Holsinger reference on unidentifiability of observation-level variance in Bernoulli variables? Nov 16, 2011
iwhite@staffmail.ed.ac.uk reference on unidentifiability of observation-level variance in Bernoulli variables? Nov 16, 2011
reference on unidentifiability of, observation-level variance in Bernoulli variables?
1 msg
Highland Statistics Ltd reference on unidentifiability of, observation-level variance in Bernoulli variables? Nov 16, 2011
Help with nested model in lme
2 msgs
Chris Habeck Help with nested model in lme Nov 15, 2011
Ben Bolker Help with nested model in lme Nov 15, 2011
mixed zero-inflated poisson regression
1 msg
Mollie Brooks mixed zero-inflated poisson regression Nov 15, 2011
Spatial correlation in lme
1 msg
Highland Statistics Ltd Spatial correlation in lme Nov 15, 2011
lme4:glmer with nested and longitudinal data?
2 msgs
hijita at gmx.net lme4:glmer with nested and longitudinal data? Nov 14, 2011
Ben Bolker lme4:glmer with nested and longitudinal data? Nov 14, 2011
Spatial correlation in lme
2 msgs
Jeffrey_Warren at fws.gov Spatial correlation in lme Nov 14, 2011
Ben Bolker Spatial correlation in lme Nov 14, 2011
different results for fixed terms
1 msg
Cristian Pasquaretta different results for fixed terms Nov 14, 2011
R-sig-mixed-models mailing list submission
1 msg
Kim Geraldine Mortega R-sig-mixed-models mailing list submission Nov 14, 2011
R: mixed zero-inflated poisson regression
1 msg
Highland Statistics Ltd R: mixed zero-inflated poisson regression Nov 14, 2011
advice on model selection and use of BLUPs needed
1 msg
Kirstin-Friederike Heise advice on model selection and use of BLUPs needed Nov 14, 2011
mixed zero-inflated poisson regression
1 msg
Highland Statistics Ltd mixed zero-inflated poisson regression Nov 14, 2011
mixed zero-inflated poisson regression (Ivar Herfindal)
1 msg
Julie Black mixed zero-inflated poisson regression (Ivar Herfindal) Nov 14, 2011
GLMM with negatively skewed data distribution
3 msgs
Balázs Lestár GLMM with negatively skewed data distribution Nov 12, 2011
Reinhold Kliegl GLMM with negatively skewed data distribution Nov 12, 2011
Balázs Lestár GLMM with negatively skewed data distribution Nov 13, 2011
Estimating IRT models by using nlme() function
1 msg
Joshua Wiley Estimating IRT models by using nlme() function Nov 11, 2011
updated Zhang et al 2011 reanalysis
1 msg
Ben Bolker updated Zhang et al 2011 reanalysis Nov 9, 2011
can linear mixed model's fisher information matrix be invertible?
1 msg
Borysław Paulewicz can linear mixed model's fisher information matrix be invertible? Nov 9, 2011
No data for 1 interaction combination: problem in R not in Genstat
2 msgs
stéphanie braun No data for 1 interaction combination: problem in R not in Genstat Nov 8, 2011
ONKELINX, Thierry No data for 1 interaction combination: problem in R not in Genstat Nov 9, 2011
Nlme prediction intervals confidence intervals multiple comparison query
1 msg
Philip Harrison Nlme prediction intervals confidence intervals multiple comparison query Nov 8, 2011
BLUPs as measures of phenotypic diversity
1 msg
John.Morrongiello at csiro.au BLUPs as measures of phenotypic diversity Nov 7, 2011
False convergence when running lmer with Zelig example for gamma.mixed
1 msg
Hugo Mildenberger False convergence when running lmer with Zelig example for gamma.mixed Nov 7, 2011
Zhang 2011 (re)analysis
1 msg
dave fournier Zhang 2011 (re)analysis Nov 7, 2011
Multivariate Linear Mixed Model in lme4
1 msg
Kevin Wright Multivariate Linear Mixed Model in lme4 Nov 7, 2011
mixed model basic question and mixed model equivalent of SAS estimate
2 msgs
John Clark mixed model basic question and mixed model equivalent of SAS estimate Nov 6, 2011
Douglas Bates mixed model basic question and mixed model equivalent of SAS estimate Nov 7, 2011
lmer adjusted means
1 msg
Allan Carson lmer adjusted means Nov 5, 2011
Question regarding glmer in lme4
3 msgs
Douglas Bates Question regarding glmer in lme4 Nov 4, 2011
Ben Bolker Question regarding glmer in lme4 Nov 4, 2011
Ben Bolker Question regarding glmer in lme4 Nov 5, 2011
Bootstrapping an lmer model
5 msgs
Christoph Scherber Bootstrapping an lmer model Nov 3, 2011
Hugo Mildenberger Bootstrapping an lmer model Nov 3, 2011
Christoph Scherber Bootstrapping an lmer model Nov 3, 2011
Douglas Bates Bootstrapping an lmer model Nov 3, 2011
Hugo Mildenberger Bootstrapping an lmer model Nov 4, 2011
lme vs lme4
2 msgs
Jim Maas lme vs lme4 Nov 4, 2011
David Atkins lme vs lme4 Nov 4, 2011
Help on example from Baayen, Davidson & Bates, 2008
1 msg
Margaret Wardle Help on example from Baayen, Davidson & Bates, 2008 Nov 4, 2011
verbose output / high correlation
1 msg
Ben Pelzer verbose output / high correlation Nov 4, 2011
lme4 or other open source mixed model package code equivalent to asreml-R
3 msgs
John Clark lme4 or other open source mixed model package code equivalent to asreml-R Nov 1, 2011
Kevin Wright lme4 or other open source mixed model package code equivalent to asreml-R Nov 2, 2011
Ben Bolker lme4 or other open source mixed model package code equivalent to asreml-R Nov 3, 2011
lme vs lme4
2 msgs
Jim Maas lme vs lme4 Nov 3, 2011
Ben Bolker lme vs lme4 Nov 3, 2011
Collinearity in lmer
2 msgs
Iker Vaquero Alba Collinearity in lmer Nov 3, 2011
Iker Vaquero Alba Collinearity in lmer Nov 3, 2011
Help!
2 msgs
Eric ADJAKOSSA Help! Nov 2, 2011
Doran, Harold Help! Nov 2, 2011
Needing help with a simple longitudinal model
1 msg
Ira Sharenow Needing help with a simple longitudinal model Nov 1, 2011
Some warning messages
1 msg
Likan Zhan Some warning messages Nov 1, 2011
seeking some advice on fixed vs random specification
6 msgs
Peter Claussen seeking some advice on fixed vs random specification Nov 1, 2011
david depew seeking some advice on fixed vs random specification Nov 1, 2011
Douglas Bates seeking some advice on fixed vs random specification Nov 1, 2011
Derek Dunfield seeking some advice on fixed vs random specification Nov 1, 2011
Douglas Bates seeking some advice on fixed vs random specification Nov 1, 2011
Robert A LaBudde seeking some advice on fixed vs random specification Nov 1, 2011
Zhang 2011 (re)analysis
2 msgs
Reinhold Kliegl Zhang 2011 (re)analysis Nov 1, 2011
Ben Bolker Zhang 2011 (re)analysis Nov 1, 2011
glmmPQL: Confidence intervals for predicted values
1 msg
Christoph Scherber glmmPQL: Confidence intervals for predicted values Nov 1, 2011