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R-SIG-mixed-models March 2014

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R-sig-mixed-models Digest, Vol 87, Issue 34
3 msgs
Malcolm Fairbrother R-sig-mixed-models Digest, Vol 87, Issue 34 Mar 24, 2014
Jarrod Hadfield R-sig-mixed-models Digest, Vol 87, Issue 34 Mar 25, 2014
Malcolm Fairbrother R-sig-mixed-models Digest, Vol 87, Issue 34 Mar 31, 2014
[Lme4-authors] Underdispersion in GLMM
1 msg
Ben Bolker Underdispersion in GLMM Mar 31, 2014
summary fn zero-inflated MCMC models.
2 msgs
Hodsoll, John summary fn zero-inflated MCMC models. Mar 31, 2014
Jarrod Hadfield summary fn zero-inflated MCMC models. Mar 31, 2014
gee, geese and glmer
1 msg
Yang, Qiong gee, geese and glmer Mar 31, 2014
R-sig-mixed-models Digest, Vol 87, Issue 48
1 msg
Koen Neijenhuijs R-sig-mixed-models Digest, Vol 87, Issue 48 Mar 31, 2014
lsmeans for multiple response variables
2 msgs
Paul Tanger lsmeans for multiple response variables Mar 29, 2014
Ben Bolker lsmeans for multiple response variables Mar 30, 2014
Message error
3 msgs
Cintia Akemi Oi Message error Mar 28, 2014
Neil Collier Message error Mar 29, 2014
Ben Bolker Message error Mar 30, 2014
GPU computing with lme4
2 msgs
Koen Neijenhuijs GPU computing with lme4 Mar 29, 2014
Ben Bolker GPU computing with lme4 Mar 29, 2014
A mixed effects model for variances of binomial probability as a response
6 msgs
nimrod.rubinstein A mixed effects model for variances of binomial probability as a response Mar 26, 2014
Ramon Diaz-Uriarte A mixed effects model for variances of binomialprobability as a responsee Mar 27, 2014
nimrod.rubinstein A mixed effects model for variances of binomialprobability as a responsee Mar 27, 2014
Ramon Diaz-Uriarte A mixed effects model for variances of binomialprobability as a responsee Mar 27, 2014
nimrod.rubinstein A mixed effects model for variances of binomialprobability as a responsee Mar 28, 2014
nimrod.rubinstein A mixed effects model for variances of binomialprobability as a responsee Mar 28, 2014
set up of priors in MCMCglmm for phylogenetic mixed models
1 msg
Jörg Albrecht set up of priors in MCMCglmm for phylogenetic mixed models Mar 28, 2014
Prediction from a multinomial model in MCMCglmm
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Szymek Drobniak Prediction from a multinomial model in MCMCglmm Mar 28, 2014
set up of priors in MCMCglmm for different error families
1 msg
Jörg Albrecht set up of priors in MCMCglmm for different error families Mar 28, 2014
Temporal correlation structure in mixed model
4 msgs
Worthington, Thomas A Temporal correlation structure in mixed model Mar 27, 2014
Ben Bolker Temporal correlation structure in mixed model Mar 27, 2014
Worthington, Thomas A Temporal correlation structure in mixed model Mar 27, 2014
Worthington, Thomas A Temporal correlation structure in mixed model Mar 27, 2014
Wrong convergence warnings with glmer in lme4 version 1.1-6??
3 msgs
Tom Davis Wrong convergence warnings with glmer in lme4 version 1.1-6?? Mar 26, 2014
Ben Bolker Wrong convergence warnings with glmer in lme4 version 1.1-6?? Mar 26, 2014
Ben Bolker Wrong convergence warnings with glmer in lme4 version 1.1-6?? Mar 27, 2014
comparison maximum likelihood and restricted maximum likelihood
2 msgs
Adianto Pangaribuan comparison maximum likelihood and restricted maximum likelihood Mar 26, 2014
Ben Bolker comparison maximum likelihood and restricted maximum likelihood Mar 27, 2014
Random effects of logistic regression: bias towards the mean?
1 msg
Tom Lentz Random effects of logistic regression: bias towards the mean? Mar 27, 2014
Help with a mixed model analysis
2 msgs
Rodrigo Junqueira Pereira Help with a mixed model analysis Mar 26, 2014
Ben Bolker Help with a mixed model analysis Mar 26, 2014
compare maximum likelihood and restricted maximum likelihood
2 msgs
Adianto Pangaribuan compare maximum likelihood and restricted maximum likelihood Mar 21, 2014
Ben Bolker compare maximum likelihood and restricted maximum likelihood Mar 26, 2014
A mixed effects model for variances of binomial probability as a response
1 msg
nimrod.rubinstein A mixed effects model for variances of binomial probability as a response Mar 26, 2014
A mixed effects model for variances of binomial probability as a response
1 msg
nimrod.rubinstein A mixed effects model for variances of binomial probability as a response Mar 26, 2014
Random effects of logistic regression: bias towards the mean?
1 msg
Tom Lentz Random effects of logistic regression: bias towards the mean? Mar 25, 2014
nested random factor
4 msgs
sandrine le squin nested random factor Mar 19, 2014
Seth Bigelow nested random factor Mar 19, 2014
Ben Bolker nested random factor Mar 19, 2014
sandrine le squin nested random factor Mar 25, 2014
Random effects of logistic regression: bias towards the mean?
2 msgs
Tom Lentz Random effects of logistic regression: bias towards the mean? Mar 25, 2014
Tibor Kiss Random effects of logistic regression: bias towards the mean? Mar 25, 2014
Multiple random and cross-classified factors specification and caveats in a generalized linear model (with MCMCglmm)
1 msg
Ned Dochtermann Multiple random and cross-classified factors specification and caveats in a generalized linear model (with MCMCglmm) Mar 24, 2014
Question of Brasil
1 msg
Ben Bolker Question of Brasil Mar 23, 2014
MCMCglmm predictions
5 msgs
Shamil Sadigov MCMCglmm predictions Mar 20, 2014
Jarrod Hadfield MCMCglmm predictions Mar 20, 2014
Ben Pelzer lmer option nAGQ=0 Mar 21, 2014
Ben Bolker lmer option nAGQ=0 Mar 21, 2014
Ben Pelzer lmer option nAGQ=0 Mar 21, 2014
Predicted values in MCMCglmm family="threshold"
3 msgs
Shamil Sadigov Predicted values in MCMCglmm family="threshold" Mar 21, 2014
Jarrod Hadfield Predicted values in MCMCglmm family="threshold" Mar 21, 2014
Jarrod Hadfield Predicted values in MCMCglmm family="threshold" Mar 21, 2014
ADMB course Montpellier ISEC
1 msg
Ben Bolker ADMB course Montpellier ISEC Mar 21, 2014
Multilevel with spatial effects
2 msgs
Linus Holtermann Multilevel with spatial effects Mar 21, 2014
Martí Casals Multilevel with spatial effects Mar 21, 2014
Recall:
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Rose, Charles E. (CDC/OID/NCHHSTP) Recall: Mar 21, 2014
(no subject)
1 msg
Rose, Charles E. (CDC/OID/NCHHSTP) (no subject) Mar 21, 2014
repeated measures random effects structure
2 msgs
Kevin Burls repeated measures random effects structure Mar 20, 2014
Lionel repeated measures random effects structure Mar 21, 2014
comparison estimation maximum likelihood and restricted maximum likelihood
1 msg
Douglas Bates comparison estimation maximum likelihood and restricted maximum likelihood Mar 20, 2014
gee, geese and glmer
1 msg
Vincent Dorie gee, geese and glmer Mar 18, 2014
gee, geese and glmer
1 msg
Ben Bolker gee, geese and glmer Mar 18, 2014
gee, geese and glmer
1 msg
Vincent Dorie gee, geese and glmer Mar 18, 2014
gee, geese and glmer
2 msgs
Ben Bolker gee, geese and glmer Mar 18, 2014
Vincent Dorie gee, geese and glmer Mar 18, 2014
gee, geese and glmer
1 msg
Ben Bolker gee, geese and glmer Mar 18, 2014
Convergence failure with glmer().
2 msgs
Rolf Turner Convergence failure with glmer(). Mar 17, 2014
Ben Bolker Convergence failure with glmer(). Mar 18, 2014
MCMCglmm update (2.18)
1 msg
Jarrod Hadfield MCMCglmm update (2.18) Mar 18, 2014
gee, geese and glmer
2 msgs
Ben Bolker gee, geese and glmer Mar 17, 2014
David Duffy gee, geese and glmer Mar 17, 2014
Easily perform your own Genome-wide Epigenetic analyses
1 msg
Karolyn Giang Easily perform your own Genome-wide Epigenetic analyses Mar 17, 2014
Release Dates lme4 Version
10 msgs
Viechtbauer Wolfgang (STAT) Release Dates lme4 Version Mar 11, 2014
Ben Bolker Release Dates lme4 Version Mar 11, 2014
Viechtbauer Wolfgang (STAT) Release Dates lme4 Version Mar 11, 2014
Ben Bolker Release Dates lme4 Version Mar 14, 2014
Rolf Turner Release Dates lme4 Version Mar 14, 2014
Vincent Dorie Release Dates lme4 Version Mar 14, 2014
Ben Bolker Release Dates lme4 Version Mar 16, 2014
Vincent Dorie Release Dates lme4 Version Mar 16, 2014
Ben Bolker Release Dates lme4 Version Mar 16, 2014
Rolf Turner Release Dates lme4 Version Mar 16, 2014
GLMM Question
1 msg
Ben Bolker GLMM Question Mar 14, 2014
gee, geese and glmer
1 msg
Ben Bolker gee, geese and glmer Mar 13, 2014
Bernoulli glmm question.
5 msgs
Rolf Turner Bernoulli glmm question. Mar 12, 2014
Marko Bachl Bernoulli glmm question. Mar 13, 2014
Tibor Kiss Bernoulli glmm question. Mar 13, 2014
espesser Bernoulli glmm question. Mar 13, 2014
Rolf Turner Bernoulli glmm question. Mar 13, 2014
gee, geese and glmer
7 msgs
Ben Bolker gee, geese and glmer Mar 8, 2014
Yang, Qiong gee, geese and glmer Mar 10, 2014
Ming-Huei Chen gee, geese and glmer Mar 10, 2014
Martin Maechler gee, geese and glmer Mar 11, 2014
Ben Bolker gee, geese and glmer Mar 11, 2014
Yang, Qiong gee, geese and glmer Mar 13, 2014
Ben Bolker gee, geese and glmer Mar 13, 2014
meta-regression using nlme with study-specific weights
1 msg
Dylan Craven meta-regression using nlme with study-specific weights Mar 13, 2014
Modeling precision and recall with GLMMs
8 msgs
Ramon Diaz-Uriarte Modeling precision and recall with GLMMs Mar 11, 2014
Jake Westfall Modeling precision and recall with GLMMs Mar 11, 2014
Jake Westfall Modeling precision and recall with GLMMs Mar 11, 2014
Ramon Diaz-Uriarte Modeling precision and recall with GLMMs Mar 12, 2014
Ramon Diaz-Uriarte Modeling precision and recall with GLMMs Mar 12, 2014
Daniel Wright Modeling precision and recall with GLMMs Mar 12, 2014
Jake Westfall Modeling precision and recall with GLMMs Mar 12, 2014
Ramon Diaz-Uriarte Modeling precision and recall with GLMMs Mar 12, 2014
Curved residuals vs fitted plot
6 msgs
Victoria Wickens Curved residuals vs fitted plot Mar 7, 2014
Paul Johnson Curved residuals vs fitted plot Mar 7, 2014
Victoria Wickens Curved residuals vs fitted plot Mar 10, 2014
Victoria Wickens Curved residuals vs fitted plot Mar 11, 2014
Paul Johnson Curved residuals vs fitted plot Mar 12, 2014
Victoria Wickens Curved residuals vs fitted plot Mar 12, 2014
formatting lmer with nested fixed and random effects
1 msg
Javan Bauder formatting lmer with nested fixed and random effects Mar 12, 2014
problem with lme4
4 msgs
Saussac Mathilde problem with lme4 Mar 11, 2014
Ben Bolker problem with lme4 Mar 11, 2014
Steve Walker problem with lme4 Mar 11, 2014
Saussac Mathilde problem with lme4 Mar 12, 2014
simultaneous nonlinear mixed effect equations
1 msg
Mateus Freua simultaneous nonlinear mixed effect equations Mar 11, 2014
Bug in lme4: attr(mod@frame, "na.action") is not re-initialized to NULL
5 msgs
Alexandre Courtiol Bug in lme4: attr(mod@frame, "na.action") is not re-initialized to NULL Mar 11, 2014
Steve Walker Bug in lme4: attr(mod@frame, "na.action") is not re-initialized to NULL Mar 11, 2014
Alexandre Courtiol Bug in lme4: attr(mod@frame, "na.action") is not re-initialized to NULL Mar 11, 2014
Ben Bolker Bug in lme4: attr(mod@frame, "na.action") is not re-initialized to NULL Mar 11, 2014
Ben Bolker Bug in lme4: attr(mod@frame, "na.action") is not re-initialized to NULL Mar 11, 2014
Mixed Effects with Cox model (multiple events)
2 msgs
Maria Helena Mourino Silva Nunes Mixed Effects with Cox model (multiple events) Mar 11, 2014
Ben Bolker Mixed Effects with Cox model (multiple events) Mar 11, 2014
Course: Beginner's Guide to MCMC, mixed models and GLMM with R
1 msg
Highland Statistics Ltd Course: Beginner's Guide to MCMC, mixed models and GLMM with R Mar 10, 2014
problem with lme4
1 msg
Saussac Mathilde problem with lme4 Mar 10, 2014
likelihood-ratio tests in conflict with coefficiants in maximal random effect model
1 msg
Shravan Vasishth likelihood-ratio tests in conflict with coefficiants in maximal random effect model Mar 7, 2014
negative binomial distribution mixture model
2 msgs
Fabian negative binomial distribution mixture model Mar 6, 2014
Ben Bolker negative binomial distribution mixture model Mar 7, 2014
likelihood-ratio tests in conflict with coefficiants in maximal random effect model
2 msgs
Shravan Vasishth likelihood-ratio tests in conflict with coefficiants in maximal random effect model Mar 7, 2014
Roger Levy likelihood-ratio tests in conflict with coefficiants in maximal random effect model Mar 7, 2014
Splines in MCMCglmm
2 msgs
Linus Holtermann Splines in MCMCglmm Mar 6, 2014
Jarrod Hadfield Splines in MCMCglmm Mar 6, 2014
formula random terms in lmer function
2 msgs
Senegaf formula random terms in lmer function Mar 6, 2014
Ben Bolker formula random terms in lmer function Mar 6, 2014
thoughts about Stroup 2014
1 msg
Ben Bolker thoughts about Stroup 2014 Mar 5, 2014
plot observed vs fitted with model with NAs in data
5 msgs
Paul Tanger plot observed vs fitted with model with NAs in data Mar 4, 2014
ONKELINX, Thierry plot observed vs fitted with model with NAs in data Mar 5, 2014
Paul Tanger plot observed vs fitted with model with NAs in data Mar 5, 2014
Ben Bolker plot observed vs fitted with model with NAs in data Mar 5, 2014
Paul Tanger plot observed vs fitted with model with NAs in data Mar 5, 2014
likelihood-ratio tests in conflict with coefficiants in maximal random effect model
5 msgs
Roger Levy likelihood-ratio tests in conflict with coefficiants in maximal random effect model Mar 3, 2014
Emilia Ellsiepen likelihood-ratio tests in conflict with coefficiants in maximal random effect model Mar 4, 2014
Roger Levy likelihood-ratio tests in conflict with coefficiants in maximal random effect model Mar 4, 2014
Emilia Ellsiepen likelihood-ratio tests in conflict with coefficiants in maximal random effect model Mar 5, 2014
Roger Levy likelihood-ratio tests in conflict with coefficiants in maximal random effect model Mar 5, 2014
MCMCglmm variance estimates Poisson distribution
7 msgs
Hodsoll, John MCMCglmm variance estimates Poisson distribution Mar 4, 2014
Jarrod Hadfield MCMCglmm variance estimates Poisson distribution Mar 4, 2014
Hodsoll, John MCMCglmm variance estimates Poisson distribution Mar 4, 2014
Jarrod Hadfield MCMCglmm variance estimates Poisson distribution Mar 4, 2014
Hodsoll, John MCMCglmm variance estimates Poisson distribution Mar 4, 2014
Jarrod Hadfield MCMCglmm variance estimates Poisson distribution Mar 5, 2014
Hodsoll, John MCMCglmm variance estimates Poisson distribution Mar 5, 2014
Complete separation example
4 msgs
Vincent Dorie Complete separation example Mar 4, 2014
Jarrod Hadfield Complete separation example Mar 4, 2014
Vincent Dorie Complete separation example Mar 4, 2014
Ben Bolker Complete separation example Mar 4, 2014
likelihood-ratio tests in conflict with coefficiants in maximal random effect model
2 msgs
Emilia Ellsiepen likelihood-ratio tests in conflict with coefficiants in maximal random effect model Mar 3, 2014
Martin Maechler likelihood-ratio tests in conflict with coefficiants in maximal random effect model Mar 4, 2014
likelihood-ratio tests in conflict with coefficiants in maximal random effect model
1 msg
Emilia Ellsiepen likelihood-ratio tests in conflict with coefficiants in maximal random effect model Mar 3, 2014
MCMCglmm: predictions for posterior predictive checks
4 msgs
Ramon Diaz-Uriarte MCMCglmm: predictions for posterior predictive checks Mar 1, 2014
Jarrod Hadfield MCMCglmm: predictions for posterior predictive checks Mar 1, 2014
Jarrod Hadfield MCMCglmm: predictions for posterior predictive checks Mar 1, 2014
Ramon Diaz-Uriarte MCMCglmm: predictions for posterior predictive checks Mar 1, 2014
prediction from glmer.nb
1 msg
Ben Bolker prediction from glmer.nb Mar 1, 2014
namer self starting function
1 msg
Daniel Hocking namer self starting function Feb 28, 2014