R-SIG-mixed-models - February 2016 - Thread View

R lme() - MEEM error (singularity in Backsolve) due to user-specified contrasts amount (?)

3 msgs Feb 29

Daniel Preciado R lme() - MEEM error (singularity in Backsolve) due to user-specified contrasts amount (?) Feb 29, 2016

Ben Bolker R lme() - MEEM error (singularity in Backsolve) due to user-specified contrasts amount (?) Feb 29, 2016

Saving object into a Matrix/List

2 msgs Feb 29

OLANO NO Nicolas (Exterieur.DCL) Saving object into a Matrix/List Feb 29, 2016

Marko Bachl Saving object into a Matrix/List Feb 29, 2016

Replicating type III anova tests for glmer/GLMM

14 msgs Feb 28

Francesco Romano Replicating type III anova tests for glmer/GLMM Feb 23, 2016

Phillip Alday Replicating type III anova tests for glmer/GLMM Feb 23, 2016

Francesco Romano Replicating type III anova tests for glmer/GLMM Feb 23, 2016

Phillip Alday Replicating type III anova tests for glmer/GLMM Feb 23, 2016

Emmanuel Curis Replicating type III anova tests for glmer/GLMM Feb 23, 2016

John Fox Replicating type III anova tests for glmer/GLMM Feb 23, 2016

Emmanuel Curis Replicating type III anova tests for glmer/GLMM Feb 23, 2016

John Fox Replicating type III anova tests for glmer/GLMM Feb 23, 2016

Francesco Romano Replicating type III anova tests for glmer/GLMM Feb 23, 2016

John Fox Replicating type III anova tests for glmer/GLMM Feb 23, 2016

Emmanuel Curis Replicating type III anova tests for glmer/GLMM Feb 24, 2016

John Fox Replicating type III anova tests for glmer/GLMM Feb 24, 2016

Emmanuel Curis Replicating type III anova tests for glmer/GLMM Feb 26, 2016

John Fox Replicating type III anova tests for glmer/GLMM Feb 28, 2016

Interpreting three-way interaction with categorical predictors and binary outcome (GLMER)

3 msgs Feb 26

Francesco Romano Interpreting three-way interaction with categorical predictors and binary outcome (GLMER) Feb 26, 2016

Emmanuel Curis Interpreting three-way interaction with categorical predictors and binary outcome (GLMER) Feb 26, 2016

Francesco Romano Interpreting three-way interaction with categorical predictors and binary outcome (GLMER) Feb 26, 2016

Generating partial plots from glmmADMB models with splines

1 msg Feb 25

Gitu wa Mbui Generating partial plots from glmmADMB models with splines Feb 25, 2016

For what can I use a correlation of fixed effects from (g)lmer?

2 msgs Feb 24

Malcolm Fairbrother For what can I use a correlation of fixed effects from (g)lmer? Feb 24, 2016

svm For what can I use a correlation of fixed effects from (g)lmer? Feb 24, 2016

Troublesome example of lmer fitting an overidentified model; Stata bad too.

2 msgs Feb 24

Paul Johnson Troublesome example of lmer fitting an overidentified model; Stata bad too. Feb 24, 2016

Douglas Bates Troublesome example of lmer fitting an overidentified model; Stata bad too. Feb 24, 2016

Replicating type III anova tests for glmer/GLM

1 msg Feb 23

Lenth, Russell V Replicating type III anova tests for glmer/GLM Feb 23, 2016

glmmADMB error: no PSV file found

1 msg Feb 23

Moore, Peggy glmmADMB error: no PSV file found Feb 23, 2016

glmmadmb Negative binomial dispersion parameter

2 msgs Feb 23

Highland Statistics Ltd glmmadmb Negative binomial dispersion parameter Feb 23, 2016

Paul Johnson glmmadmb Negative binomial dispersion parameter Feb 23, 2016

glmmadmb Negative binomial dispersion parameter

1 msg Feb 23

Highland Statistics Ltd glmmadmb Negative binomial dispersion parameter Feb 23, 2016

Fitting LMMs using the MixedModels package for Julia

2 msgs Feb 23

Douglas Bates Fitting LMMs using the MixedModels package for Julia Feb 23, 2016

glmmadmb Negative binomial dispersion parameter

3 msgs Feb 23

Marte Lilleeng glmmadmb Negative binomial dispersion parameter Feb 23, 2016

Mollie Brooks glmmadmb Negative binomial dispersion parameter Feb 23, 2016

Paul Johnson glmmadmb Negative binomial dispersion parameter Feb 23, 2016

glmmadmb beta - error

1 msg Feb 23

Highland Statistics Ltd glmmadmb beta - error Feb 23, 2016

glmmADMB error: no PSV file found

2 msgs Feb 23

Moore, Peggy glmmADMB error: no PSV file found Feb 5, 2016

Kathy glmmADMB error: no PSV file found Feb 23, 2016

Replicating type III anova tests for glmer/GLMM

4 msgs Feb 23

Francesco Romano Replicating type III anova tests for glmer/GLMM Feb 22, 2016

Henrik Singmann Replicating type III anova tests for glmer/GLMM Feb 23, 2016

John Fox Replicating type III anova tests for glmer/GLMM Feb 23, 2016

Ben Bolker Replicating type III anova tests for glmer/GLMM Feb 23, 2016

glmmadmb beta - error

5 msgs Feb 23

Highland Statistics Ltd glmmadmb beta - error Feb 23, 2016

Ludovico Frate glmmadmb beta - error Feb 23, 2016

Highland Statistics Ltd glmmadmb beta - error Feb 23, 2016

Ludovico Frate glmmadmb beta - error Feb 23, 2016

Highland Statistics Ltd glmmadmb beta - error Feb 23, 2016

glmmadmb beta - error

1 msg Feb 23

Ludovico Frate glmmadmb beta - error Feb 23, 2016

How to correctly specify a mixed model

2 msgs Feb 22

christos mammides How to correctly specify a mixed model Feb 22, 2016

Ben Bolker How to correctly specify a mixed model Feb 22, 2016

For what can I use a correlation of fixed effects from (g)lmer?

1 msg Feb 22

svm For what can I use a correlation of fixed effects from (g)lmer? Feb 22, 2016

glmmADMB error: Invalid index for array

2 msgs Feb 22

Moore, Peggy glmmADMB error: Invalid index for array Feb 22, 2016

Ben Bolker glmmADMB error: Invalid index for array Feb 22, 2016

horseshoe priors in MCMCglmm?

2 msgs Feb 22

Jonathan Judge horseshoe priors in MCMCglmm? Feb 21, 2016

Jarrod Hadfield horseshoe priors in MCMCglmm? Feb 22, 2016

Genoa course: Introduction to Zero Inflated Models

1 msg Feb 22

Highland Statistics Ltd Genoa course: Introduction to Zero Inflated Models Feb 22, 2016

glmmADMB

2 msgs Feb 20

Tock Chua glmmADMB Feb 15, 2016

Ben Bolker glmmADMB Feb 20, 2016

glmer error (maxstephalfit) PIRLS step-halvings failed to reduce deviance in pwrssUpdate)

2 msgs Feb 20

moses selebatso glmer error (maxstephalfit) PIRLS step-halvings failed to reduce deviance in pwrssUpdate) Feb 19, 2016

Ben Bolker glmer error (maxstephalfit) PIRLS step-halvings failed to reduce deviance in pwrssUpdate) Feb 20, 2016

new R user struggling with error and convergence issues

5 msgs Feb 20

Jennifer Yourkavitch new R user struggling with error and convergence issues Feb 15, 2016

Ben Bolker new R user struggling with error and convergence issues Feb 15, 2016

Jennifer Yourkavitch new R user struggling with error and convergence issues Feb 17, 2016

Ben Bolker new R user struggling with error and convergence issues Feb 20, 2016

Specifying a model with a link function in MCMCglmm

6 msgs Feb 19

Sam H Specifying a model with a link function in MCMCglmm Feb 17, 2016

Jarrod Hadfield Specifying a model with a link function in MCMCglmm Feb 18, 2016

Sam H Specifying a model with a link function in MCMCglmm Feb 18, 2016

Greg Snow Specifying a model with a link function in MCMCglmm Feb 18, 2016

Jarrod Hadfield Specifying a model with a link function in MCMCglmm Feb 18, 2016

Jarrod Hadfield Specifying a model with a link function in MCMCglmm Feb 19, 2016

Comparing variance components

2 msgs Feb 18

Dean Castillo Comparing variance components Feb 17, 2016

Jarrod Hadfield Comparing variance components Feb 18, 2016

"Non-positive definite approximate variance-covariance" output

3 msgs Feb 18

Jacob Bukoski "Non-positive definite approximate variance-covariance" output Feb 17, 2016

Douglas Bates "Non-positive definite approximate variance-covariance" output Feb 17, 2016

Jacob Bukoski "Non-positive definite approximate variance-covariance" output Feb 18, 2016

R-sig-mixed-models Digest, Vol 110, Issue 16

1 msg Feb 17

Sandra Hamel R-sig-mixed-models Digest, Vol 110, Issue 16 Feb 17, 2016

glmmADMB error: Invalid index for array

1 msg Feb 16

Moore, Peggy glmmADMB error: Invalid index for array Feb 16, 2016

Comparing variance components

7 msgs Feb 16

Doran, Harold Comparing variance components Feb 16, 2016

Wen Huang Comparing variance components Feb 16, 2016

Bert Gunter Comparing variance components Feb 16, 2016

Thompson,Paul Comparing variance components Feb 16, 2016

Wen Huang Comparing variance components Feb 16, 2016

Jarrod Hadfield Comparing variance components Feb 16, 2016

Mixed Models

5 msgs Feb 16

Jessica Witt Mixed Models Feb 16, 2016

Neil French Collier Mixed Models Feb 16, 2016

Ben Bolker Mixed Models Feb 16, 2016

Emmanuel Curis Mixed Models Feb 16, 2016

Paul Debes Mixed Models Feb 16, 2016

hurdle modfels in glmmadmb

1 msg Feb 16

Ben Bolker hurdle modfels in glmmadmb Feb 16, 2016

Help on random regression model with correlated measures on consecutive days

1 msg Feb 14

Manuel Ramon Help on random regression model with correlated measures on consecutive days Feb 14, 2016

glmmADMB error: Invalid index for array

2 msgs Feb 14

Moore, Peggy glmmADMB error: Invalid index for array Feb 12, 2016

Ben Bolker glmmADMB error: Invalid index for array Feb 14, 2016

Random effects in GAMs

3 msgs Feb 12

Julian Chen Random effects in GAMs Feb 12, 2016

Philippi, Tom Random effects in GAMs Feb 12, 2016

Julian Chen Random effects in GAMs Feb 12, 2016

A model for repeated treatments and repeated outcomes

1 msg Feb 12

Daniel Rubi A model for repeated treatments and repeated outcomes Feb 12, 2016

A model for repeated treatments and repeated outcomes

2 msgs Feb 12

Daniel Rubi A model for repeated treatments and repeated outcomes Feb 11, 2016

Peter Claussen A model for repeated treatments and repeated outcomes Feb 12, 2016

long format and residual covariance matrix in MCMCglmm

1 msg Feb 12

David Villegas Ríos long format and residual covariance matrix in MCMCglmm Feb 12, 2016

Plotting effects in original units

2 msgs Feb 12

Mariano Devoto Plotting effects in original units Feb 12, 2016

John Fox Plotting effects in original units Feb 12, 2016

Reporting coefficients from model averaged GAM (M) models with smoothed terms

1 msg Feb 12

Gitu wa Mbui Reporting coefficients from model averaged GAM (M) models with smoothed terms Feb 12, 2016

Low rank fixed effect design matrix LMER package

2 msgs Feb 11

suraj keshri Low rank fixed effect design matrix LMER package Feb 10, 2016

Ben Bolker Low rank fixed effect design matrix LMER package Feb 11, 2016

Model sintax unbalanced design

1 msg Feb 11

Lorenzo Vignali Model sintax unbalanced design Feb 11, 2016

A model for repeated treatments and repeated outcomes

2 msgs Feb 10

Daniel Rubi A model for repeated treatments and repeated outcomes Feb 8, 2016

Thierry Onkelinx A model for repeated treatments and repeated outcomes Feb 10, 2016

syntax for nested random factors in lme

2 msgs Feb 9

Kathleen Côté syntax for nested random factors in lme Feb 8, 2016

Jake Westfall syntax for nested random factors in lme Feb 9, 2016

[ADMB Users] getting standardized coefficients in admb

4 msgs Feb 9

Ben Bolker getting standardized coefficients in admb Feb 7, 2016

Ellen Robertson getting standardized coefficients in admb Feb 9, 2016

Ben Bolker getting standardized coefficients in admb Feb 9, 2016

Ellen Robertson getting standardized coefficients in admb Feb 9, 2016

Plotting means and error bars for fixed effects in a ME model

4 msgs Feb 8

Ché Lucero Plotting means and error bars for fixed effects in a ME model Feb 7, 2016

Paul Johnson Plotting means and error bars for fixed effects in a ME model Feb 7, 2016

Ché Lucero Plotting means and error bars for fixed effects in a ME model Feb 7, 2016

Dan Mirman Plotting means and error bars for fixed effects in a ME model Feb 8, 2016

F and P values for random factors

4 msgs Feb 5

Mahendra Dia F and P values for random factors Feb 4, 2016

Alex Fine F and P values for random factors Feb 5, 2016

Philippi, Tom F and P values for random factors Feb 5, 2016

Mahendra Dia F and P values for random factors Feb 5, 2016

R code for segmented mixed models with random changepoints

1 msg Feb 5

vito muggeo R code for segmented mixed models with random changepoints Feb 5, 2016

Use predict() after lmer() (library lme4)

1 msg Feb 3

Thierry Onkelinx Use predict() after lmer() (library lme4) Feb 3, 2016

MCMCglmm predictions using new data error

1 msg Feb 1

Jarrod Hadfield MCMCglmm predictions using new data error Feb 1, 2016

R-SIG-mixed-models February 2016