R-SIG-mixed-models - October 2020 - Subject View

(no subject)

2 msgs · Oct 1 – Oct 9

Marte Lilleeng (no subject) Oct 1, 2020 Ben Bolker (no subject) Oct 9, 2020

Assessing whether sigma for a random effects parameter is equal to 0

3 msgs · Oct 13 – Oct 14

Sammie Haskin Assessing whether sigma for a random effects parameter is equal to 0 Oct 13, 2020 Ben Bolker Assessing whether sigma for a random effects parameter is equal to 0 Oct 13, 2020 David Duffy Assessing whether sigma for a random effects parameter is equal to 0 Oct 14, 2020

Can DHARMa be used with natural splines in the glmer formula?

1 msg · Oct 8

SuzyR Brun Can DHARMa be used with natural splines in the glmer formula? Oct 8, 2020

Convergence in glmmTMB but not glmer

9 msgs · Oct 20 – Oct 21

Converting lme4 model syntax into corresponding regression equation

3 msgs · Oct 3 – Oct 4

Simon Harmel Converting lme4 model syntax into corresponding regression equation Oct 3, 2020 Ben Bolker Converting lme4 model syntax into corresponding regression equation Oct 3, 2020 Pierre de Villemereuil Converting lme4 model syntax into corresponding regression equation Oct 4, 2020

Drop the correlation bet. random effects to find those with small variance

1 msg · Oct 7

Phillip Alday Drop the correlation bet. random effects to find those with small variance Oct 7, 2020

Dropping correlations bet. random-effects in lme4 syntax

8 msgs · Oct 2 – Oct 7

ICC from lmer with back transform

3 msgs · Oct 30 – Oct 30

fabien leboeuf ICC from lmer with back transform Oct 30, 2020 Pierre de Villemereuil ICC from lmer with back transform Oct 30, 2020 Pierre de Villemereuil ICC from lmer with back transform Oct 30, 2020

Installation of glmmTMB

5 msgs · Oct 20 – Oct 20

Bingsong Zhang Installation of glmmTMB Oct 20, 2020 Phillip Alday Installation of glmmTMB Oct 20, 2020 Bingsong Zhang Installation of glmmTMB Oct 20, 2020 Ben Bolker Installation of glmmTMB Oct 20, 2020 Bingsong Zhang Installation of glmmTMB Oct 20, 2020

Marginal effect plot for an interaction effect from GLMM following a beta-distribution (glmmTMB)

4 msgs · Oct 19 – Oct 19

Jan anye Velimsky Marginal effect plot for an interaction effect from GLMM following a beta-distribution (glmmTMB) Oct 19, 2020 Ben Bolker Marginal effect plot for an interaction effect from GLMM following a beta-distribution (glmmTMB) Oct 19, 2020 John Fox Marginal effect plot for an interaction effect from GLMM following a beta-distribution (glmmTMB) Oct 19, 2020 Daniel Lüdecke Marginal effect plot for an interaction effect from GLMM following a beta-distribution (glmmTMB) Oct 19, 2020

Not really interested in correlations or random effects variances

2 msgs · Oct 2 – Oct 2

Michele Scandola Not really interested in correlations or random effects variances Oct 2, 2020 Phillip Alday Not really interested in correlations or random effects variances Oct 2, 2020

Open PhD position on mixed effect models at University of Geneva

1 msg · Oct 28

Olivier Renaud Open PhD position on mixed effect models at University of Geneva Oct 28, 2020

Predict for glmer

1 msg · Oct 9

Ben Bolker Predict for glmer Oct 9, 2020

Pulling specific parameters from models to prevent exhausting memory.

3 msgs · Oct 17 – Oct 18

Ades, James Pulling specific parameters from models to prevent exhausting memory. Oct 17, 2020 Voeten, C.C. Pulling specific parameters from models to prevent exhausting memory. Oct 18, 2020 Ades, James Pulling specific parameters from models to prevent exhausting memory. Oct 18, 2020

Reporting den of df for f like AOV table using Sattertwaite's method

1 msg · Oct 18

Salahadin Lotfi Reporting den of df for f like AOV table using Sattertwaite's method Oct 18, 2020

Variance of the fixed effects lme4

3 msgs · Oct 26 – Oct 26

Simon Harmel Variance of the fixed effects lme4 Oct 26, 2020 Phillip Alday Variance of the fixed effects lme4 Oct 26, 2020 Paul Johnson Variance of the fixed effects lme4 Oct 26, 2020

What "pseudoreplication" or "degrees of freedom inflation" is in multilevel models?

2 msgs · Oct 2 – Oct 2

Michele Scandola What "pseudoreplication" or "degrees of freedom inflation" is in multilevel models? Oct 2, 2020 Philippi, Tom What "pseudoreplication" or "degrees of freedom inflation" is in multilevel models? Oct 2, 2020

Why lme4 doesn't throw an error for illegitimate an model

8 msgs · Oct 7 – Oct 7

Simon Harmel Why lme4 doesn't throw an error for illegitimate an model Oct 7, 2020 Simon Harmel Why lme4 doesn't throw an error for illegitimate an model Oct 7, 2020 Phillip Alday Why lme4 doesn't throw an error for illegitimate an model Oct 7, 2020 Simon Harmel Why lme4 doesn't throw an error for illegitimate an model Oct 7, 2020 Simon Harmel Why lme4 doesn't throw an error for illegitimate an model Oct 7, 2020 Phillip Alday Why lme4 doesn't throw an error for illegitimate an model Oct 7, 2020 Simon Harmel Why lme4 doesn't throw an error for illegitimate an model Oct 7, 2020 Ben Bolker Why lme4 doesn't throw an error for illegitimate an model Oct 7, 2020

aggregation of count data

1 msg · Oct 16

Don Cohen aggregation of count data Oct 16, 2020

blmer(), minimum amount of prior to get a model to converge

6 msgs · Oct 2 – Oct 4

Simon Harmel blmer(), minimum amount of prior to get a model to converge Oct 2, 2020 Vincent Dorie blmer(), minimum amount of prior to get a model to converge Oct 3, 2020 Ben Bolker blmer(), minimum amount of prior to get a model to converge Oct 3, 2020 Vincent Dorie blmer(), minimum amount of prior to get a model to converge Oct 4, 2020 Simon Harmel blmer(), minimum amount of prior to get a model to converge Oct 4, 2020 Ben Bolker blmer(), minimum amount of prior to get a model to converge Oct 4, 2020

confidence intervals with mvrnorm - upper value equal to inf

8 msgs · Oct 10 – Oct 19

glmmTMB installation

4 msgs · Oct 14 – Oct 15

Bingsong Zhang glmmTMB installation Oct 14, 2020 Bingsong Zhang glmmTMB installation Oct 15, 2020 Andrew Johnson glmmTMB installation Oct 15, 2020 Ben Bolker glmmTMB installation Oct 15, 2020

glmmTMB questions

4 msgs · Oct 8 – Oct 8

Bingsong Zhang glmmTMB questions Oct 8, 2020 Ben Bolker glmmTMB questions Oct 8, 2020 Philippi, Tom glmmTMB questions Oct 8, 2020 Bingsong Zhang glmmTMB questions Oct 8, 2020

lme4

2 msgs · Oct 9 – Oct 11

Peter R Law lme4 Oct 9, 2020 Ben Bolker lme4 Oct 11, 2020

lme4: Obtaining the SE of difference in two fixed-effects

2 msgs · Oct 29 – Oct 29

Lenth, Russell V lme4: Obtaining the SE of difference in two fixed-effects Oct 29, 2020 Ben Bolker lme4: Obtaining the SE of difference in two fixed-effects Oct 29, 2020

lme4: Obtaining the SE of difference in two fixed-effects slope

2 msgs · Oct 28 – Oct 29

Simon Harmel lme4: Obtaining the SE of difference in two fixed-effects slope Oct 28, 2020 Thierry Onkelinx lme4: Obtaining the SE of difference in two fixed-effects slope Oct 29, 2020

lme4: plotting profile density (not Zeta) manually not by lattice

8 msgs · Oct 25 – Oct 27

more on nbinom1 vs 2

2 msgs · Oct 22 – Oct 22

Don Cohen more on nbinom1 vs 2 Oct 22, 2020 Ben Bolker more on nbinom1 vs 2 Oct 22, 2020

na.action = na.augment for random effects in lme4?

3 msgs · Oct 11 – Oct 11

Andrew Robinson na.action = na.augment for random effects in lme4? Oct 11, 2020 Phillip Alday na.action = na.augment for random effects in lme4? Oct 11, 2020 Ben Bolker na.action = na.augment for random effects in lme4? Oct 11, 2020

next on aggregation, nbinom1, nbinom2

1 msg · Oct 24

Don Cohen next on aggregation, nbinom1, nbinom2 Oct 24, 2020

next question about random effects (and where to post)