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GAMM4: In mer_finalize(ans) : false convergence (8)
2 messages · saba, Ben Bolker
saba <saba.ghotbi at ...> writes:
Hi I have read your comment on ( In mer_finalize(ans)), and some questions raised for me. It would be your kind if advise me about all or some of them:
I'm not sure who you're addressing (this is a mailing list), but I'll try.
In introducing the random effect is it important that repeated measurements exist per individuals? And why?
It depends on the model. If the dispersion parameter is estimated (as in a linear mixed model fitted with lmer or a Gamma or Gaussian model fitted with glmer), then a one-measurement-per-individual experimental design will probably end up confounding the dispersion parameter (or residual variance in the case of lmer fits) with the random effect. Hopefully you'll get an error or a warning message in this case, but it is possible to trick lme4. If the dispersion parameter is fixed (binomial/Poisson GLMMs) then an observation-level random effect is a useful way to model overdispersion. See http://glmm.wikidot.com/faq
Does R consider the repeated values in a group and calculate the variances?
Not sure what you mean here. You may want to read e.g. Pinheiro and Bates 2000, or some other text on mixed models, for the basic theory of what mixed-model software is estimating.
Best regards saba