Bioc-devel March 2014
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Monday, March 31, 2014 3 emails
Sunday, March 30, 2014 1 email
Saturday, March 29, 2014 5 emails
Friday, March 28, 2014 5 emails
Valerie Obenchain
GenomicAlignments: using asMates=TRUE and yieldSize with paired-end BAM files
Michael Lawrence
flank function with start argument a named vector
Michael Lawrence
rtracklayer: Export to bigwig with unused seqlevels
Leonard Goldstein
flank function with start argument a named vector
Julian Gehring
rtracklayer: Export to bigwig with unused seqlevels
Thursday, March 27, 2014 9 emails
Diana LOW (IMCB)
Git-svn bridge
Hervé Pagès
GenomicAlignments: using asMates=TRUE and yieldSize with paired-end BAM files
Hervé Pagès
Conflicting definitions for function redefined as S4 generics
Valerie Obenchain
GenomicAlignments: using asMates=TRUE and yieldSize with paired-end BAM files
Valerie Obenchain
GenomicAlignments: using asMates=TRUE and yieldSize with paired-end BAM files
James W. MacDonald
Apparent error in illuminaHumanv4.db
Taku Tokuyasu
Apparent error in illuminaHumanv4.db
Elena Grassi
Roar - detecting 3'UTR shortening with standard RNAseq data
Ulrich Bodenhofer
Conflicting definitions for function redefined as S4 generics
Wednesday, March 26, 2014 8 emails
rcaloger
To Bioc Team: OneChannelGUI error
Dan Tenenbaum
To Bioc Team: OneChannelGUI error
rcaloger
To Bioc Team: OneChannelGUI error
Hervé Pagès
Conflicting definitions for function redefined as S4 generics
Michael Lawrence
Conflicting definitions for function redefined as S4 generics
Gabriel Becker
Conflicting definitions for function redefined as S4 generics
Michael Lawrence
Conflicting definitions for function redefined as S4 generics
Ulrich Bodenhofer
Conflicting definitions for function redefined as S4 generics
Tuesday, March 25, 2014 8 emails
Monday, March 24, 2014 6 emails
Sunday, March 23, 2014 1 email
Saturday, March 22, 2014 3 emails
Friday, March 21, 2014 9 emails
Hervé Pagès
report a minor bug in GenomicRanges
Michael Lawrence
restrictToSNV for VCF
Hervé Pagès
restrictToSNV for VCF
Michael Lawrence
restrictToSNV for VCF
Michael Love
GenomicAlignments: using asMates=TRUE and yieldSize with paired-end BAM files
Martin Morgan
restrictToSNV for VCF
Ou, Jianhong
report a minor bug in GenomicRanges
Hervé Pagès
report a minor bug in GenomicRanges
Ou, Jianhong
report a minor bug in GenomicRanges
Thursday, March 20, 2014 3 emails
Wednesday, March 19, 2014 13 emails
Michael Lawrence
restrictToSNV for VCF
Sean Davis
restrictToSNV for VCF
Valerie Obenchain
restrictToSNV for VCF
Michael Lawrence
restrictToSNV for VCF
Vincent Carey
restrictToSNV for VCF
Michael Lawrence
restrictToSNV for VCF
Michael Lawrence
restrictToSNV for VCF
Stephanie M. Gogarten
restrictToSNV for VCF
Valerie Obenchain
GenomicAlignments: using asMates=TRUE and yieldSize with paired-end BAM files
Valerie Obenchain
GenomicAlignments: using asMates=TRUE and yieldSize with paired-end BAM files
Michael Love
GenomicAlignments: using asMates=TRUE and yieldSize with paired-end BAM files
Valerie Obenchain
GenomicAlignments: using asMates=TRUE and yieldSize with paired-end BAM files
Michael Love
GenomicAlignments: using asMates=TRUE and yieldSize with paired-end BAM files
Tuesday, March 18, 2014 6 emails
Monday, March 17, 2014 11 emails
Michael Lawrence
parsing embedded FASTA data
Hervé Pagès
parsing embedded FASTA data
Michael Lawrence
parsing embedded FASTA data
Valerie Obenchain
concat problem with CharacterList in mcols of GRanges
Hervé Pagès
concat problem with CharacterList in mcols of GRanges
Dan Tenenbaum
The importance of bumping (incrementing) package version numbers
Antti Honkela
Unreproducible build check warning
Hervé Pagès
Unreproducible build check warning
Valerie Obenchain
Unreproducible build check warning
Valerie Obenchain
concat problem with CharacterList in mcols of GRanges
Antti Honkela
Unreproducible build check warning
Sunday, March 16, 2014 3 emails
Saturday, March 15, 2014 1 email
Friday, March 14, 2014 3 emails
Thursday, March 13, 2014 3 emails
Wednesday, March 12, 2014 20 emails
Michael Love
'droplevels' argument in `[` method for SummarizedExperiment?
Steve Lianoglou
'droplevels' argument in `[` method for SummarizedExperiment?
Michael Lawrence
'droplevels' argument in `[` method for SummarizedExperiment?
Martin Morgan
'droplevels' argument in `[` method for SummarizedExperiment?
Ryan
'droplevels' argument in `[` method for SummarizedExperiment?
Marc Carlson
RE : AnnotationDbi and select function
Wolfgang Huber
'droplevels' argument in `[` method for SummarizedExperiment?
Marc Carlson
RE : AnnotationDbi and select function
Servant Nicolas
RE : AnnotationDbi and select function
Marc Carlson
AnnotationDbi and select function
James W. MacDonald
AnnotationDbi and select function
Servant Nicolas
AnnotationDbi and select function
Andrzej Oleś
BiocStyle and fonts
Martin Morgan
BiocStyle and fonts
Laurent Gatto
BiocStyle and fonts
Andrzej Oleś
BiocStyle and fonts
Kasper Daniel Hansen
BiocStyle and fonts
Michael Lawrence
file registry - feedback
Laurent Gatto
BiocStyle and fonts
Andrzej Oleś
BiocStyle and fonts
Tuesday, March 11, 2014 18 emails
Leonard Goldstein
readGAlignmentPairs function broken?
Hervé Pagès
file registry - feedback
Michael Lawrence
file registry - feedback
Michael Lawrence
file registry - feedback
Valerie Obenchain
file registry - feedback
Laurent Gatto
BiocStyle and fonts
Martin Morgan
BiocStyle and fonts
Hervé Pagès
file registry - feedback
Hervé Pagès
file registry - feedback
Laurent Gatto
BiocStyle and fonts
Valerie Obenchain
file registry - feedback
Hector Corrada Bravo
file registry - feedback
Valerie Obenchain
file registry - feedback
Michael Lawrence
file registry - feedback
Michael Lawrence
file registry - feedback
Vincent Carey
file registry - feedback
Gabriel Becker
file registry - feedback
Michael Lawrence
file registry - feedback