R-devel - September 2009 - Date View

Wednesday, September 30, 2009 24 emails

Peng Yu How to compile R with command completion? Simon Urbanek How to compile R with command completion? Duncan Murdoch buglet in is.na? Peng Yu How to compile R with command completion? Nicholas Lewin-Koh buglet in is.na? Peter Dalgaard buglet in is.na? Duncan Murdoch buglet in is.na? Nicholas Lewin-Koh buglet in is.na? Matias Silva Installation problem from R 2.8.x William Dunlap Installation problem from R 2.8.x Uwe Ligges Installation problem from R 2.8.x zong-pei.han at imm.ox.ac.uk Installation problem from R 2.8.x Simon Urbanek How to compile R with command completion? Simon Urbanek R 2.9.2 crashes when sorting latin1-encoded strings Peng Yu How to compile R with command completion? Simon Urbanek Problems connecting to httpd help server with some browsers Neil Tiffin unable to load shared library (Symbol not found: _PQbackendPID) Stefan Evert R 2.9.2 crashes when sorting latin1-encoded strings Romain Francois How do I access class slots from C? Romain Francois How do I access class slots from C? Abhijit Bera How do I access class slots from C? Abhijit Bera How do I access class slots from C? Thomas Friedrichsmeier Problems connecting to httpd help server with some browsers Romain Francois How do I access class slots from C?

Tuesday, September 29, 2009 24 emails

Abhijit Bera How do I access class slots from C? Dirk Eddelbuettel unable to load shared library (Symbol not found: _PQbackendPID) Jeff D. Hamann unable to load shared library (Symbol not found: _PQbackendPID) Jeffrey Horner Problems connecting to httpd help server with some browsers rsparapa at mcw.edu build issues on Solaris (PR#13975) Simon Urbanek Problems connecting to httpd help server with some browsers Heather Turner model.matrix troubles with AlgDesign Thomas Friedrichsmeier Problems connecting to httpd help server with some browsers Dirk Eddelbuettel How do I access class slots from C? David Winsemius enabling core dumps Simon Urbanek How do I access class slots from C? Ulrike Grömping model.matrix troubles with AlgDesign Duncan Murdoch Downloading R-2.10.0 Heather Turner model.matrix troubles with AlgDesign Martin Morgan How do I access class slots from C? Simon Urbanek How do I access class slots from C? Romain Francois How do I access class slots from C? Mamun Rashid Problem installing RMAGEML package Abhijit Bera How do I access class slots from C? John Nolan Probability of data values form empirical distribution Lina Rusyte Probability of data values form empirical distribution Uwe Ligges build time dependency Uwe Ligges Downloading R-2.10.0 Romain Francois build time dependency

Monday, September 28, 2009 14 emails

Seth Falcon build time dependency Gordon K Smyth documentation cross references under R 2.10.0dev for Windows Gabor Grothendieck Downloading R-2.10.0 Romain Francois build time dependency Uwe Ligges build time dependency Michael Ramati lattice's mai/mar analog Corrado Topi Windows Laptop specification query Brian Ripley Windows Laptop specification query Corrado Topi Windows Laptop specification query Lina Rusyte Starting values in “arima.sim” function Torsten Hothorn mboost_1.1-3 blackboost_fit (PR#13972) Brian Ripley Windows Laptop specification query Ulrike Grömping model.matrix troubles with AlgDesign Romain Francois build time dependency

Sunday, September 27, 2009 8 emails

Gordon K Smyth documentation cross references under R 2.10.0dev for Windows Sean O'Riordain Windows Laptop specification query Keith Satterley Windows Laptop specification query Uwe Ligges build time dependency Uwe Ligges mboost_1.1-3 blackboost_fit (PR#13972) Uwe Ligges xaxs disactivated when asp=1 in plots (PR#13971) Jens Oehlschlägel bug or feature in read.table? Baptiste Auguie puzzle with drawDetails for a class derived from a gTree

Saturday, September 26, 2009 6 emails

William Dunlap Compatibility of external C code across platforms Duncan Murdoch Rtools210 missing jpeg-7? Murray Efford Compatibility of external C code across platforms Brian Ripley Compatibility of external C code across platforms bullshit at mail.ru mboost_1.1-3 blackboost_fit (PR#13972) Hiroyuki Kawakatsu Rtools210 missing jpeg-7?

Friday, September 25, 2009 12 emails

Murray Efford Compatibility of external C code across platforms Douglas Bates R + C + Lapack toy regression example francois_birgand at ncsu.edu xaxs disactivated when asp=1 in plots (PR#13971) Hervé Pagès crash with NAs in subscripted assignment of a raw vector Jean lobry Wish for stripchart to handle pch %in% 21:25 with bg Peter Dalgaard Problem with dgamma function. Charles Danko Problem with dgamma function. Baptiste Auguie unexpected behavior of `[<-` method for class unit.arithmetic Hadley Wickham Collision between difftime and ggplot2. Allen S. Rout Collision between difftime and ggplot2. Romain Francois build time dependency Baptiste Auguie unexpected behavior of `[<-` method for class unit.arithmetic

Thursday, September 24, 2009 17 emails

Seth Falcon crash with NAs in subscripted assignment of a raw vector Paul Murrell unexpected behavior of `[<-` method for class unit.arithmetic Hervé Pagès crash with NAs in subscripted assignment of a raw vector Thomas Petzoldt speedup approxfun (code suggestion) Baptiste Auguie unexpected behavior of `[<-` method for class unit.arithmetic Vinh Nguyen R + C + Lapack toy regression example Vinh Nguyen R + C + Lapack toy regression example Duncan Murdoch Crash due to extreme example Saptarshi Guha Crash due to extreme example Douglas Bates R + C + Lapack toy regression example Duncan Murdoch R v2.10.0: Doc clarification for cross references and where are we heading? Duncan Murdoch R v2.10.0: Doc clarification for cross references and where are we heading? Romain Francois R v2.10.0: Doc clarification for cross references and where are we heading? Duncan Murdoch Crash due to extreme example Duncan Murdoch R v2.10.0: Doc clarification for cross references and where are we heading? Romain Francois R v2.10.0: Doc clarification for cross references and where are we heading? Duncan Murdoch R v2.10.0: Doc clarification for cross references and where are we heading?

Wednesday, September 23, 2009 15 emails

Romain Francois R v2.10.0: Doc clarification for cross references and where are we heading? Hadley Wickham R v2.10.0: Doc clarification for cross references and where are we heading? Gabor Grothendieck R v2.10.0: Doc clarification for cross references and where are we heading? Duncan Murdoch R v2.10.0: Doc clarification for cross references and where are we heading? Henrik Bengtsson R v2.10.0: Doc clarification for cross references and where are we heading? Duncan Murdoch Crash due to extreme example Saptarshi Guha Crash due to extreme example Rich Calaway Bug 13937 (setRepositories() doesn't allow graceful cancellation from GUI menu) (PR#13969) Rich Calaway Bug 13937 (setRepositories() doesn't allow graceful cancellation from GUI menu) (PR#13968) Rich Calaway warnings handled oddly in functions with browser calls (PR#13967) David Winsemius enabling core dumps David Winsemius Strange behaviour with global variable in C David Winsemius Strange behaviour with global variable in C Jose Claudio Faria A couple of suggestions: source function (package base) Vinh Nguyen R + C + Lapack toy regression example

Tuesday, September 22, 2009 28 emails

Monday, September 21, 2009 9 emails

Romain Francois cannot build R-devel (>= r49747) Jose Claudio Faria A couple of suggestions: source function (package base) Martin Morgan DYLIB_EXT vs. SHLIB_EXT? andreas.westfeld at htw-dresden.de .Random.seed not found (PR#13963) dennisr at wi.mit.edu Ubuntu Hardy python-rpy package missing _rpy2092 (PR#13962) Mark Kimpel 2.10.0 Under development (unstable) (2009-09-15 r49711) just built segfaults on Debian Squeeze Simon Urbanek R with Java Nadine Bethke R with Java [...] Nadine Bethke R with Java

Sunday, September 20, 2009 1 email

Saptarshi Guha Return a list from a .Call but segfaults

Saturday, September 19, 2009 3 emails

Saptarshi Guha Return a list from a .Call but segfaults Saptarshi Guha Return a list from a .Call but segfaults cstrato Package crashes R under Windows Vista

Friday, September 18, 2009 16 emails

Gabor Grothendieck what should names(x) be padded with when length(x) is increased? William Dunlap what should names(x) be padded with when length(x) is increased? Duncan Murdoch Package crashes R under Windows Vista Charlie Sharpsteen inconsistency in attaching attributes to NULL William Dunlap inconsistency in attaching attributes to NULL cstrato Package crashes R under Windows Vista (Ted Harding) basename returns "." not in filename (PR#13958) Simon Urbanek basename returns "." not in filename (PR#13958) Simon Urbanek basename returns "." not in filename (PR#13958) Jens Oehlschlägel basename returns "." not in filename (PR#13958) Duncan Murdoch 2.10.0 Under development (unstable) (2009-09-15 r49711) just built segfaults on Debian Squeeze Simon Urbanek basename returns "." not in filename (PR#13958) Peter Dalgaard basename returns "." not in filename (PR#13958) Uwe Ligges winbuilder down Jens Oehlschlägel basename returns "." not in filename (PR#13958) liam.gretton at leicester.ac.uk Reading clipboard with read.delim("clipboard") crash (PR#13957)

Thursday, September 17, 2009 20 emails

Wednesday, September 16, 2009 24 emails

Mark Kimpel 2.10.0 Under development (unstable) (2009-09-15 r49711) just built segfaults on Debian Squeeze Duncan Murdoch 2.10.0 Under development (unstable) (2009-09-15 r49711) just built segfaults on Debian Squeeze Duncan Murdoch 2.10.0 Under development (unstable) (2009-09-15 r49711) just built segfaults on Debian Squeeze Mark Kimpel 2.10.0 Under development (unstable) (2009-09-15 r49711) just built segfaults on Debian Squeeze Mark Kimpel 2.10.0 Under development (unstable) (2009-09-15 r49711) just built segfaults on Debian Squeeze John Chambers S3 objects in S4 slots Duncan Murdoch 2.10.0 Under development (unstable) (2009-09-15 r49711) just built segfaults on Debian Squeeze Mark Kimpel 2.10.0 Under development (unstable) (2009-09-15 r49711) just built segfaults on Debian Squeeze Duncan Murdoch S3 objects in S4 slots P.V.Dunmore at massey.ac.nz Bogus warning in splinefun (PR#13954) Peter Dalgaard 2.10.0 Under development (unstable) (2009-09-15 r49711) just built segfaults on Debian Squeeze Simon Urbanek 2.10.0 Under development (unstable) (2009-09-15 r49711) just built segfaults on Debian Squeeze Mark Kimpel 2.10.0 Under development (unstable) (2009-09-15 r49711) just built segfaults on Debian Squeeze John Chambers S3 objects in S4 slots William Dunlap Building R package with .c sub-routine files David Winsemius Building R package with .c sub-routine files Abhijit Bera I want to get a reference to this time series object Martin Morgan I want to get a reference to this time series object Martin Maechler r-forge.r-project.org down? Joris @ VU r-forge.r-project.org down? Romain Francois I want to get a reference to this time series object Abhijit Bera I want to get a reference to this time series object Romain Francois I want to get a reference to this time series object Abhijit Bera I want to get a reference to this time series object

Tuesday, September 15, 2009 12 emails

Martin Kober S3 objects in S4 slots Kjell Konis Building R package with .c sub-routine files Duncan Murdoch Building R package with .c sub-routine files David Winsemius Building R package with .c sub-routine files John Chambers S3 objects in S4 slots Martin Morgan S3 objects in S4 slots Abhijit Bera Clarifications please. Duncan Murdoch S3 objects in S4 slots Martin Maechler S3 objects in S4 slots Duncan Murdoch S3 objects in S4 slots Martin Kober S3 objects in S4 slots Abhijit Bera Clarifications please.

Monday, September 14, 2009 1 email

Vadim Ogranovich Save all objects in all environment stack

Saturday, September 12, 2009 8 emails

Saptarshi Guha Access to integer value of BUILTINSXP/SPECIALSXP John C Nash Why license filtering is important (was non-GPL ...) Saptarshi Guha Access to integer value of BUILTINSXP/SPECIALSXP Dirk Eddelbuettel DESCRIPTION/OS_type and OS X Marc Schwartz DESCRIPTION/OS_type and OS X Dirk Eddelbuettel DESCRIPTION/OS_type and OS X Douglas Bates Non-GPL packages for R Martin Maechler S4 Generics and NAMESPACE : justified warning ?

Friday, September 11, 2009 19 emails

Thursday, September 10, 2009 21 emails

Gabor Grothendieck Needless updating of HTML package descriptions Duncan Murdoch Non-GPL packages for R Nicholas Lewin-Koh Non-GPL packages for R Nicholas Lewin-Koh (no subject) Spencer Graves Non-GPL packages for R Dirk Eddelbuettel Non-GPL packages for R Christos Hatzis importing/loading package without a namespace Martin Morgan importing/loading package without a namespace Christos Hatzis importing/loading package without a namespace bownes at gmail.com R_SHELL=/bin/bash causes issues (PR#13949) Luke Tierney Finding the environment of a promise Gabor Grothendieck Non-GPL packages for R John C Nash Non-GPL packages for R bownes at gmail.com 'make install' fails on Solaris (PR#13946) Bob Bownes 'make install' fails on Solaris (PR#13946) Brian Ripley 'make install' fails on Solaris (PR#13946) Brian Ripley 'make install' fails on Solaris (PR#13946) bownes at gmail.com 'make install' fails on Solaris (PR#13946) Bob Bownes 'make install' fails on Solaris (PR#13946) Duncan Murdoch findLineNum and setBreakpoint added Christophe Genolini Package that does not work until I re write the exactly the same code

Wednesday, September 9, 2009 18 emails

Peter Dalgaard 'make install' fails on Solaris (PR#13946) Brian Ripley 'make install' fails on Solaris (PR#13946) Mark Bravington Monkey patching +.POSIXt Hadley Wickham Monkey patching +.POSIXt bownes at gmail.com 'make install' fails on Solaris (PR#13946) Mark Bravington Monkey patching +.POSIXt Greg B. Hill Problem using model.frame with argument subset in own function Allen S. Rout Dependencies of packages' CHECK.... Duncan Murdoch Finding the environment of a promise Henrique Dallazuanna Finding the environment of a promise Simon Urbanek Finding the environment of a promise Hadley Wickham Finding the environment of a promise Hadley Wickham Monkey patching +.POSIXt Duncan Murdoch Finding the environment of a promise Yuri D'Elia Debugging R core Henrique Dallazuanna Finding the environment of a promise Hadley Wickham Finding the environment of a promise Christophe Genolini Package that does not work until I re write the exactly the same code

Tuesday, September 8, 2009 13 emails

Bob Bownes Simple ./config option to disable networking Fritz Scholz feature and bug in wilcox.test Patrick Aboyoun Difference between is(<<arg>>, "ANY") and extends(<<arg>>, "ANY") Patrick Aboyoun Reissue: Base "Object" class to use in S4 slot specification William Dunlap question about ... passed to two different functions Simon Urbanek Reissue: Base "Object" class to use in S4 slot specification Simon Urbanek Reissue: Base "Object" class to use in S4 slot specification Patrick Aboyoun Reissue: Base "Object" class to use in S4 slot specification Duncan Murdoch make check fails in r49613 Uwe Ligges make check fails in r49613 Hiroyuki Kawakatsu make check fails in r49613 Uwe Ligges make check fails in r49613 Hiroyuki Kawakatsu make check fails in r49613

Monday, September 7, 2009 11 emails

Guillaume Yziquel Usage of OCaml/R binding. Charles Geyer question about ... passed to two different functions Jim Regetz performance of vector subscripting via character index Andrew Piskorski Running two R instances at the same time paul.m.mcguire.jr at att.net OS X PDF bug (PR#13943) Peter Juhasz Running two R instances at the same time Andrew Piskorski Running two R instances at the same time Duncan Murdoch some (minor) Rd issue: line breaking in \S4method within \usage{} Peter Ruckdeschel some (minor) Rd issue: line breaking in \S4method within \usage{} Romain Francois R CMD INSTALL --clean Brian Ripley OS X PDF bug (PR#13943)

Sunday, September 6, 2009 7 emails

paul.m.mcguire.jr at att.net OS X PDF bug (PR#13943) Duncan Murdoch R v2.9.2 patched still referred to as RC Henrik Bengtsson R v2.9.2 patched still referred to as RC Duncan Murdoch question about ... passed to two different functions Charles Geyer question about ... passed to two different functions Brian Ripley question about --with-valgrind-instrumentation=level Charles Geyer question about --with-valgrind-instrumentation=level

Saturday, September 5, 2009 10 emails

Simon Urbanek Running two R instances at the same time Peter Juhasz Running two R instances at the same time Roger Koenker Viewing pdfs from inst/doc Uwe Ligges Dependencies of packages' CHECK.... Hadley Wickham Load a package without installing it Jay Emerson asking for suggestions: interface for a C++ class Andrew Piskorski Load a package without installing it David Winsemius Unexpected behaviour of "next line" in gdb Romain Francois returned value of R_tryEval David Winsemius Unexpected behaviour of "next line" in gdb

Friday, September 4, 2009 34 emails

Romain Francois Viewing pdfs from inst/doc Barry Rowlingson Viewing pdfs from inst/doc Roger Koenker Viewing pdfs from inst/doc Simon Urbanek asking for suggestions: interface for a C++ class Seth Falcon asking for suggestions: interface for a C++ class Yurii Aulchenko asking for suggestions: interface for a C++ class Guido van Steen Including a binary Python Interpreter into a binary R-package for MS Windows Allen S. Rout Dependencies of packages' CHECK.... Simon Urbanek enabling core dumps David Winsemius enabling core dumps Martin Morgan enabling core dumps David Winsemius enabling core dumps David Winsemius enabling core dumps Martin Morgan enabling core dumps David Winsemius enabling core dumps Vinh Nguyen building r packages for windows on a mac/linux David Winsemius enabling core dumps Simon Urbanek Rscript and default packages Martin Morgan Suggestion: Allow packages to add additional information to sessionInfo() Duncan Murdoch Rscript and default packages Romain Francois Rscript and default packages Gabor Grothendieck Load a package without installing it Hadley Wickham Load a package without installing it Simon Urbanek Rscript and default packages Hadley Wickham Package tests must have extension .R? Romain Francois Load a package without installing it Hadley Wickham Load a package without installing it Duncan Murdoch Apparent bug in summaryBy (PR#13941) Guido van Steen Including a binary Python Interpreter into a binary R-package for MS Windows Uwe Ligges building r packages for windows on a mac/linux Brian Ripley calling Lapack and BLAS routines from C Friedrich Leisch Suggestion: Allow packages to add additional information to sessionInfo() Martin Maechler Documentation for is.atomic and is.recursive Uwe Ligges Including a binary Python Interpreter into a binary R-package for MS Windows

Thursday, September 3, 2009 47 emails

Marcin Hitczenko calling Lapack and BLAS routines from C Gabriel Becker Missing warning when NAs are generated during coercion to complex (PR#13942) Gabriel Becker Missing warning when NAs are generated during coercion to complex Saptarshi Guha Running an expression 1MN times using embedded R paterno at fnal.gov Apparent bug in summaryBy (PR#13941) Duncan Murdoch Rscript and default packages Duncan Murdoch Documentation for is.atomic and is.recursive Simon Urbanek Running an expression 1MN times using embedded R Saptarshi Guha Running an expression 1MN times using embedded R Guido van Steen Including a binary Python Interpreter into a binary R-package for MS Windows Hin-Tak Leung building r packages for windows on a mac/linux Stavros Macrakis Documentation for is.atomic and is.recursive Hervé Pagès R devel repository tarball naming issue Henrik Bengtsson Suggestion: Allow packages to add additional information to sessionInfo() Romain Francois Rscript and default packages Kevin R. Coombes Suggestion: Allow packages to add additional information to sessionInfo() Henrik Bengtsson Suggestion: Allow packages to add additional information to sessionInfo() Gabor Grothendieck Suggestion: Allow packages to add additional information to sessionInfo() Henrik Bengtsson Suggestion: Allow packages to add additional information to sessionInfo() Saptarshi Guha Turn of -O2 during package build Saptarshi Guha Turn of -O2 during package build Douglas Bates clearNames and unname Roger D. Peng force & identity Dirk Eddelbuettel --enable-memory-profiling at configuration (compilation) time? Hin-Tak Leung building r packages for windows on a mac/linux Duncan Murdoch Rscript and default packages Martin Maechler clearNames and unname Martin Maechler clearNames and unname Henrique Dallazuanna clearNames and unname Romain Francois Rscript and default packages Henrik Bengtsson Package names Uwe Ligges Package names Hadley Wickham Package names Kurt Hornik Package names Hadley Wickham force & identity Hadley Wickham clearNames and unname Hadley Wickham Package names Simon Urbanek Depth of protection stack? Romain Francois How to ship R scripts with R packages ? Duncan Murdoch How to ship R scripts with R packages ? Dirk Eddelbuettel How to ship R scripts with R packages ? Corrado Topi --enable-memory-profiling at configuration (compilation) time? Romain Francois How to ship R scripts with R packages ? Brian Ripley names<- in data.frame (PR#13916) Yohan Chalabi S4 Generics and NAMESPACE : justified warning ? Martin Maechler R devel repository tarball naming issue Uwe Ligges Including a binary Python Interpreter into a binary R-package for MS Windows

Wednesday, September 2, 2009 29 emails

Tuesday, September 1, 2009 9 emails

Allen S. Rout Dependencies of packages' CHECK.... Pin Tian Ng License of Port3 library for R Matias Silva Installing rJava RJDBC bad interpreter: Permission denied gvsteen at yahoo.com Including a binary Python Interpreter into a binary R-package for MS Windows Gabor Grothendieck Including a binary Python Interpreter into a binary R-package for MS Windows gvsteen at yahoo.com Including a binary Python Interpreter into a binary R-package for MS Windows Matthias Burger R devel repository tarball naming issue Martin Morgan Unexpected behaviour initializing S4 class Krunoslav Sever Unexpected behaviour initializing S4 class

Monday, August 31, 2009 2 emails

Rich Calaway setRepositories() doesn't allow graceful cancellation from GUI menu (PR#13937) Rich Calaway xy.coords assumes lists will have x and y components, but doesn't check (PR#13936)

R-devel September 2009