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R-SIG-mixed-models April 2011

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lmer L.ratio
3 msgs
Sujal Phadke lmer L.ratio Apr 14, 2011
Ben Bolker lmer L.ratio Apr 14, 2011
Robert Kushler lmer L.ratio Apr 29, 2011
R crash for an lme4a example
5 msgs
Ken Knoblauch R crash for an lme4a example Apr 28, 2011
Reinhold Kliegl R crash for an lme4a example Apr 28, 2011
Ken Knoblauch R crash for an lme4a example Apr 28, 2011
Rob Goedman R crash for an lme4a example Apr 28, 2011
Ken Knoblauch R crash for an lme4a example Apr 28, 2011
can't load lme4a ...
1 msg
Robert Kinley can't load lme4a ... Apr 28, 2011
prior specification in MCMCglmm
4 msgs
Ned Dochtermann prior specification in MCMCglmm Apr 26, 2011
Celine Teplitsky prior specification in MCMCglmm Apr 27, 2011
Ned Dochtermann prior specification in MCMCglmm Apr 27, 2011
Pierre de Villemereuil prior specification in MCMCglmm Apr 28, 2011
Error in .local(object, n, verbose, ...) : Update not yet written
2 msgs
Greg Gilbert Error in .local(object, n, verbose, ...) : Update not yet written Apr 27, 2011
Douglas Bates Error in .local(object, n, verbose, ...) : Update not yet written Apr 27, 2011
interaction term in null hypothesis
3 msgs
Junqian Gordon Xu interaction term in null hypothesis Apr 25, 2011
Peter Dalgaard interaction term in null hypothesis Apr 26, 2011
Junqian Gordon Xu interaction term in null hypothesis Apr 26, 2011
prior specification in MCMCglmm
1 msg
Ned Dochtermann prior specification in MCMCglmm Apr 26, 2011
G-computation from GLMM fitted values
1 msg
benton at stat.berkeley.edu G-computation from GLMM fitted values Apr 26, 2011
prior specification in MCMCglmm
4 msgs
Celine Teplitsky prior specification in MCMCglmm Apr 25, 2011
Pierre de Villemereuil prior specification in MCMCglmm Apr 25, 2011
Celine Teplitsky prior specification in MCMCglmm Apr 26, 2011
Pierre de Villemereuil prior specification in MCMCglmm Apr 26, 2011
Profile problem in lme4a
2 msgs
Murray Jorgensen Profile problem in lme4a Apr 24, 2011
Renaud Lancelot Profile problem in lme4a Apr 25, 2011
Fitting known var-cov matrix in logistic regression model
5 msgs
Margaret Mackinnon Fitting known var-cov matrix in logistic regression model Apr 21, 2011
David Duffy Fitting known var-cov matrix in logistic regression model Apr 21, 2011
Margaret Mackinnon Fitting known var-cov matrix in logistic regression model Apr 22, 2011
Dominick Samperi Fitting known var-cov matrix in logistic regression model Apr 23, 2011
Jarrod Hadfield Fitting known var-cov matrix in logistic regression model Apr 23, 2011
unsolved problem: SAS estimate function equivalent to estimate BLUP in lme4 or nlme or any other R package
4 msgs
Nilaya Sharma unsolved problem: SAS estimate function equivalent to estimate BLUP in lme4 or nlme or any other R package Apr 18, 2011
David Duffy unsolved problem: SAS estimate function equivalent to estimate BLUP in lme4 or nlme or any other R package Apr 21, 2011
Kevin Wright unsolved problem: SAS estimate function equivalent to estimate BLUP in lme4 or nlme or any other R package Apr 21, 2011
Nilaya Sharma unsolved problem: SAS estimate function equivalent to estimate BLUP in lme4 or nlme or any other R package Apr 22, 2011
conditional modes
1 msg
Gustavo Betini conditional modes Apr 22, 2011
log of offset for Poisson?
2 msgs
benton at stat.berkeley.edu log of offset for Poisson? Apr 21, 2011
Ben Bolker log of offset for Poisson? Apr 21, 2011
lme4 ranef
4 msgs
Douglas Bates lme4 ranef Apr 20, 2011
Tokihiko Ando lme4 ranef Apr 20, 2011
Douglas Bates lme4 ranef Apr 21, 2011
Tokihiko Ando lme4 ranef Apr 21, 2011
Discovery version of ASREML now free
2 msgs
Kevin Wright Discovery version of ASREML now free Apr 21, 2011
Robert Kushler Discovery version of ASREML now free Apr 21, 2011
Convergence issues running clmm in ordinal package
2 msgs
Karen Lamb Convergence issues running clmm in ordinal package Apr 20, 2011
Rune Haubo Convergence issues running clmm in ordinal package Apr 21, 2011
crossed and temporally auto-correlated random effects in same model
1 msg
John.Morrongiello at csiro.au crossed and temporally auto-correlated random effects in same model Apr 20, 2011
Status of the development package lme4a
10 msgs
Matthias Gralle Status of the development package lme4a Apr 19, 2011
Douglas Bates Status of the development package lme4a Apr 19, 2011
Matthias Gralle Status of the development package lme4a Apr 19, 2011
Rolf Turner Status of the development package lme4a Apr 19, 2011
Rolf Turner Status of the development package lme4a Apr 19, 2011
Matthias Gralle Status of the development package lme4a Apr 19, 2011
Matthias Gralle Status of the development package lme4a Apr 20, 2011
Douglas Bates Status of the development package lme4a Apr 20, 2011
Ben Bolker Status of the development package lme4a Apr 20, 2011
John Maindonald Status of the development package lme4a Apr 20, 2011
Toeplitz correlation object for nlme
1 msg
Hae Kyung Im Toeplitz correlation object for nlme Apr 20, 2011
Convergence issues running clmm in ordinal package
2 msgs
Karen Lamb Convergence issues running clmm in ordinal package Apr 20, 2011
David Duffy Convergence issues running clmm in ordinal package Apr 20, 2011
env() statement
1 msg
Ben Bolker env() statement Apr 20, 2011
Silent conversion problem in lmer - should have said '_convergence_ problem'
1 msg
Douglas Bates Silent conversion problem in lmer - should have said '_convergence_ problem' Apr 20, 2011
problem with lme4a::profile() [ apologies if this is a duplicate - ]
1 msg
Robert Kinley problem with lme4a::profile() [ apologies if this is a duplicate - ] Apr 20, 2011
Silent conversion problem in lmer - should have said '_convergence_ problem'
1 msg
S Ellison Silent conversion problem in lmer - should have said '_convergence_ problem' Apr 20, 2011
lme4a::profile() error
1 msg
Robert Kinley lme4a::profile() error Apr 20, 2011
Convergence issues running clmm in ordinal package
1 msg
Karen Lamb Convergence issues running clmm in ordinal package Apr 20, 2011
choosing random effects
1 msg
jon winchester choosing random effects Apr 19, 2011
Dosing Sequence Error in rbind(deparse.level, ...) :
1 msg
Shankar Lanke Dosing Sequence Error in rbind(deparse.level, ...) : Apr 19, 2011
Problem with overfitting
2 msgs
Iker Vaquero Alba Problem with overfitting Apr 19, 2011
Reinhold Kliegl Problem with overfitting Apr 19, 2011
No data for 1 interaction combination: problem in R not in Genstat
2 msgs
Roger Humphry No data for 1 interaction combination: problem in R not in Genstat Apr 18, 2011
Douglas Bates No data for 1 interaction combination: problem in R not in Genstat Apr 19, 2011
Silent conversion problem in lmer - should have said '_convergence_ problem'
2 msgs
S Ellison Silent conversion problem in lmer - should have said '_convergence_ problem' Apr 19, 2011
Douglas Bates Silent conversion problem in lmer - should have said '_convergence_ problem' Apr 19, 2011
eta-squared in lmer
4 msgs
Petar Milin eta-squared in lmer Apr 18, 2011
Michael Lawrence eta-squared in lmer Apr 18, 2011
Petar Milin eta-squared in lmer Apr 19, 2011
Reinhold Kliegl eta-squared in lmer Apr 19, 2011
Silent conversion problem in lmer
1 msg
S Ellison Silent conversion problem in lmer Apr 18, 2011
repeated measures: levels of grouping factor must be less than number of obs
3 msgs
Brent Pedersen repeated measures: levels of grouping factor must be less than number of obs Apr 18, 2011
Andrew Miles repeated measures: levels of grouping factor must be less than number of obs Apr 18, 2011
Brent Pedersen repeated measures: levels of grouping factor must be less than number of obs Apr 18, 2011
from general r-help to mixed help group: please help: extract p-value from mixed model in kinship package
4 msgs
Ram H. Sharma from general r-help to mixed help group: please help: extract p-value from mixed model in kinship package Apr 15, 2011
Ben Bolker from general r-help to mixed help group: please help: extract p-value from mixed model in kinship package Apr 16, 2011
sharma.ram.h at gmail.com from general r-help to mixed help group: please help: extract p-value from m Apr 16, 2011
Ben Bolker from general r-help to mixed help group: please help: extract p-value from m Apr 17, 2011
unsolved questions remainingFwd: [R] lme4 problem: model defining and effect estimation ------ question from new bird to R community from SAS community
1 msg
Nilaya Sharma unsolved questions remainingFwd: [R] lme4 problem: model defining and effect estimation ------ question from new bird to R community from SAS community Apr 16, 2011
p values with lmer (mcmcpvalue error)
5 msgs
Kaitlyn Gaynor p values with lmer (mcmcpvalue error) Apr 16, 2011
Douglas Bates p values with lmer (mcmcpvalue error) Apr 16, 2011
Ben Bolker p values with lmer (mcmcpvalue error) Apr 16, 2011
Kaitlyn Gaynor p values with lmer (mcmcpvalue error) Apr 16, 2011
Reinhold Kliegl p values with lmer (mcmcpvalue error) Apr 16, 2011
Conveting SAS Proc mixed to R code
3 msgs
Ben Bolker Conveting SAS Proc mixed to R code Apr 15, 2011
magali proffit p-value mixed model family poisson Apr 16, 2011
Ben Bolker p-value mixed model family poisson Apr 16, 2011
ordinal regression for multilevel models
2 msgs
Joe King ordinal regression for multilevel models Apr 15, 2011
Ben Bolker ordinal regression for multilevel models Apr 16, 2011
Interaction with quadratic variable
1 msg
Elizabeth Crone Interaction with quadratic variable Apr 16, 2011
Uniform prior in mcmcsamp
2 msgs
Martin Krkosek Uniform prior in mcmcsamp Apr 12, 2011
Ben Bolker Uniform prior in mcmcsamp Apr 15, 2011
lmer L.ratio
1 msg
Ben Bolker lmer L.ratio Apr 15, 2011
Zero inflated models course
1 msg
Highland Statistics Ltd Zero inflated models course Apr 15, 2011
dramatic difference in REML and ML random effect estimates
3 msgs
Simon Chamaillé-Jammes dramatic difference in REML and ML random effect estimates Apr 13, 2011
Ben Bolker dramatic difference in REML and ML random effect estimates Apr 14, 2011
Douglas Bates dramatic difference in REML and ML random effect estimates Apr 14, 2011
level 1 variance-covariance structure
9 msgs
Sebastián Daza level 1 variance-covariance structure Apr 11, 2011
ONKELINX, Thierry level 1 variance-covariance structure Apr 12, 2011
Sebastián Daza level 1 variance-covariance structure Apr 12, 2011
ONKELINX, Thierry level 1 variance-covariance structure Apr 12, 2011
Andrew Robinson level 1 variance-covariance structure Apr 12, 2011
Sebastián Daza level 1 variance-covariance structure Apr 12, 2011
Sebastián Daza level 1 variance-covariance structure Apr 12, 2011
ONKELINX, Thierry level 1 variance-covariance structure Apr 13, 2011
Sebastián Daza level 1 variance-covariance structure Apr 13, 2011
Grouped vs ungrouped binary data
1 msg
Giovanni Petris Grouped vs ungrouped binary data Apr 13, 2011
Interaction with quadratic variable
1 msg
Solene.Tremblay-Gendron at UQAR.QC.CA Interaction with quadratic variable Apr 13, 2011
AIC in nlmer
2 msgs
Helen Sofaer AIC in nlmer Apr 12, 2011
Ben Bolker AIC in nlmer Apr 12, 2011
No data for 1 interaction combination: problem in R not Genstat
1 msg
Roger Humphry No data for 1 interaction combination: problem in R not Genstat Apr 12, 2011
package nlme
2 msgs
Anna Renwick package nlme Apr 7, 2011
Ben Bolker package nlme Apr 12, 2011
extracting fitted means from nlme and glmer
1 msg
Jenny Hutchinson extracting fitted means from nlme and glmer Apr 12, 2011
multiple comparison (many to one) of fixed effect and random slop in lmer model
6 msgs
Yuan-Ye Zhang multiple comparison (many to one) of fixed effect and random slop in lmer model Apr 11, 2011
Yuan-Ye Zhang multiple comparison (many to one) of fixed effect and random slop in lmer model Apr 12, 2011
Ben Bolker multiple comparison (many to one) of fixed effect and random slop in lmer model Apr 12, 2011
Yuan-Ye Zhang multiple comparison (many to one) of fixed effect and random slop in lmer model Apr 12, 2011
Ben Bolker multiple comparison (many to one) of fixed effect and random slop in lmer model Apr 12, 2011
Yuan-Ye Zhang multiple comparison (many to one) of fixed effect and random slop in lmer model Apr 12, 2011
No data for 1 interaction combination: problem in R not in Genstat
3 msgs
Roger Humphry No data for 1 interaction combination: problem in R not in Genstat Apr 11, 2011
Ben Bolker No data for 1 interaction combination: problem in R not in Genstat Apr 12, 2011
Douglas Bates No data for 1 interaction combination: problem in R not in Genstat Apr 12, 2011
multiple comparison (many to one) of fixed effect and random slop in lmer model
1 msg
Yuan-Ye Zhang multiple comparison (many to one) of fixed effect and random slop in lmer model Apr 12, 2011
lmer model specification problem
4 msgs
Ram H. Sharma lmer model specification problem Apr 11, 2011
rajibul islam lmer model specification problem Apr 11, 2011
Ben Bolker lmer model specification problem Apr 11, 2011
Ben Bolker lmer model specification problem Apr 12, 2011
still help needed: lmer model specification problem
1 msg
Ram H. Sharma still help needed: lmer model specification problem Apr 12, 2011
multiple comparison (many to one) of fixed effect and random slop in lmer model
1 msg
Yuan-Ye Zhang multiple comparison (many to one) of fixed effect and random slop in lmer model Apr 11, 2011
nlme book
2 msgs
Dominick Samperi nlme book Apr 10, 2011
Andrew Robinson nlme book Apr 10, 2011
GEE vs. mixed-effects modeling for handling singletons in higher-level units
3 msgs
Jeremy Koster GEE vs. mixed-effects modeling for handling singletons in higher-level units Apr 7, 2011
Douglas Bates GEE vs. mixed-effects modeling for handling singletons in higher-level units Apr 8, 2011
Kevin E. Thorpe GEE vs. mixed-effects modeling for handling singletons in higher-level units Apr 8, 2011
Random Slope for Dummy Variables
3 msgs
Junyan Luo Random Slope for Dummy Variables Apr 7, 2011
Douglas Bates Random Slope for Dummy Variables Apr 7, 2011
Junyan Luo Random Slope for Dummy Variables Apr 7, 2011
Mixed effect logistic regression help
9 msgs
Giancarlo Sadoti Mixed effect logistic regression help Apr 4, 2011
Christine Griffiths Mixed effect logistic regression help Apr 6, 2011
Lim Yonghao (no subject) Apr 6, 2011
Lim Yonghao Error message while running piecewise growth model Apr 6, 2011
ONKELINX, Thierry (no subject) Apr 6, 2011
Douglas Bates (no subject) Apr 6, 2011
Lim Yonghao (no subject) Apr 7, 2011
Lim Yonghao (no subject) Apr 7, 2011
Douglas Bates (no subject) Apr 7, 2011
Reliability via mixed effects modelling
3 msgs
Michael Lawrence Reliability via mixed effects modelling Apr 6, 2011
Viechtbauer Wolfgang (STAT) Reliability via mixed effects modelling Apr 7, 2011
Michael Lawrence Reliability via mixed effects modelling Apr 7, 2011
can not load BRugs
1 msg
Alexandre Villers can not load BRugs Apr 7, 2011
Why BLUP may not be a good thing
1 msg
Ryan King Why BLUP may not be a good thing Apr 6, 2011
Why BLUP may not be a good thing
3 msgs
Murray Jorgensen Why BLUP may not be a good thing Apr 6, 2011
Douglas Bates Why BLUP may not be a good thing Apr 6, 2011
Murray Jorgensen Why BLUP may not be a good thing Apr 6, 2011
lmer and p-values (variable selection)
3 msgs
Douglas Bates lmer and p-values (variable selection) Apr 6, 2011
John Maindonald lmer and p-values (variable selection) Apr 6, 2011
Ben Bolker lmer and p-values (variable selection) Apr 6, 2011
variance structure
1 msg
Jarrod Hadfield variance structure Apr 6, 2011
Providing data for a course project
2 msgs
Douglas Bates Providing data for a course project Apr 6, 2011
Reinhold Kliegl Providing data for a course project Apr 6, 2011
variance structure
3 msgs
Cristina Gomes variance structure Apr 5, 2011
Ben Bolker variance structure Apr 5, 2011
Jarrod Hadfield variance structure Apr 6, 2011
SIR in MCMCglmm - syntax question
2 msgs
Szymek Drobniak SIR in MCMCglmm - syntax question Apr 6, 2011
Jarrod Hadfield SIR in MCMCglmm - syntax question Apr 6, 2011
understanding error with "profile" method of lme4a
3 msgs
Darren Norris understanding error with "profile" method of lme4a Apr 1, 2011
Ben Bolker understanding error with "profile" method of lme4a Apr 4, 2011
Douglas Bates understanding error with "profile" method of lme4a Apr 6, 2011
Is BLUP a good thing?
1 msg
Douglas Bates Is BLUP a good thing? Apr 6, 2011
Specifying the random effects term for class vs continuous variables
1 msg
Douglas Bates Specifying the random effects term for class vs continuous variables Apr 6, 2011
plot response by levels of factor
2 msgs
Matthew Finkbeiner plot response by levels of factor Mar 31, 2011
Douglas Bates plot response by levels of factor Apr 6, 2011
Using residuals to test for random effect
1 msg
Max Reuter Using residuals to test for random effect Apr 6, 2011
mysterious syntax error in call to nlmer
1 msg
Douglas Bates mysterious syntax error in call to nlmer Apr 5, 2011
mysterious syntax error in call to nlmer
1 msg
Jacob Wegelin mysterious syntax error in call to nlmer Apr 5, 2011
Packages of variables?
3 msgs
Chris Mcowen Packages of variables? Apr 5, 2011
Douglas Bates Packages of variables? Apr 5, 2011
Chris Mcowen Packages of variables? Apr 5, 2011
Using residuals to test for random effect (Max Reuter)
1 msg
Fabian Scheipl Using residuals to test for random effect (Max Reuter) Apr 5, 2011
Using residuals to test for random effect
1 msg
Max Reuter Using residuals to test for random effect Apr 4, 2011
Documentation for the glm module in jags/rjags?
6 msgs
ronggui Documentation for the glm module in jags/rjags? Apr 3, 2011
Douglas Bates Documentation for the glm module in jags/rjags? Apr 3, 2011
ronggui Documentation for the glm module in jags/rjags? Apr 3, 2011
ronggui Documentation for the glm module in jags/rjags? Apr 3, 2011
Martyn Plummer Documentation for the glm module in jags/rjags? Apr 4, 2011
ronggui Documentation for the glm module in jags/rjags? Apr 4, 2011
AIC in nlmer
2 msgs
Helen Sofaer AIC in nlmer Apr 1, 2011
Ben Bolker AIC in nlmer Apr 4, 2011
multilevel logistic model with MCMCglmm
5 msgs
ronggui multilevel logistic model with MCMCglmm Apr 3, 2011
Jarrod Hadfield multilevel logistic model with MCMCglmm Apr 3, 2011
ronggui multilevel logistic model with MCMCglmm Apr 3, 2011
Jarrod Hadfield multilevel logistic model with MCMCglmm Apr 3, 2011
ronggui multilevel logistic model with MCMCglmm Apr 3, 2011
pdStrat for nlme?
1 msg
Douglas Bates pdStrat for nlme? Apr 1, 2011
nlme for exact binomial model
2 msgs
Nonyane, Bareng A.S. nlme for exact binomial model Apr 1, 2011
ONKELINX, Thierry nlme for exact binomial model Apr 1, 2011
nlme for exact binomial model
1 msg
Nonyane, Bareng A.S. nlme for exact binomial model Apr 1, 2011
analysis of longitudinal data
1 msg
Markus Jäntti analysis of longitudinal data Mar 31, 2011
analysis of longitudinal data
1 msg
generalized mixed models with proportion data using lme4
1 msg
suggestions for estimating confidence intervals with only 1.5 GB of ram?
3 msgs
Can we fit this model in nlme or lme4? Monday, March 28, 2011 8:10 PM
1 msg
Haoda Fu Can we fit this model in nlme or lme4? Monday, March 28, 2011 8:10 PM Mar 31, 2011