R-SIG-mixed-models - April 2012 - Date View

Monday, April 30, 2012 5 emails

Jeff Newmiller R-sig-mixed-models Digest, Vol 64, Issue 44 Shankar Lanke R-sig-mixed-models Digest, Vol 64, Issue 44 Whit Armstrong MCMCglmm for binomial models? -- updated to use rcppbugs Paul Johnson MCMCglmm for binomial models? -- updated to use rcppbugs James Gilbert MCMCglmm - detecting covariance patterns?

Sunday, April 29, 2012 5 emails

arun Xy plot help Jeff Newmiller Xy plot help Hugo.Mildenberger at web.de Xy plot help arun Xy plot help arun Correlation of random effects in lmer

Saturday, April 28, 2012 3 emails

R. Scott Davidson Correlation of random effects in lmer Mario V. Balzan plot glmmPQL Ben Bolker Correlation of random effects in lmer

Friday, April 27, 2012 7 emails

arun Correlation of random effects in lmer Andrew Robinson Correlation of random effects in lmer Ben Bolker Correlation of random effects in lmer arun Correlation of random effects in lmer Ben Bolker plot glmmPQL Cecile De Cat lmer model evaluation vs fixed-effect significance Angelina Mukherjee Gene expression lme

Thursday, April 26, 2012 9 emails

Chris Howden Comparison of predictors in lme4 Whit Armstrong MCMCglmm for binomial models? -- updated to use rcppbugs arun lmer model comparison Federico Calboli Gene expression lme Federico Calboli Gene expression lme Angelina Mukherjee Gene expression lme Mario V. Balzan plot glmmPQL Eiko Fried Comparison of predictors in lme4 Yann Hautier Predictions and/or confidence (or prediction) intervals on predictions

Wednesday, April 25, 2012 8 emails

Chris Howden Comparison of predictors in lme4 Eiko Fried MCMCglmm & multilevel multivariate models Ben Bolker Nested longitudinal Eiko Fried Comparison of predictors in lme4 Andrzej Predictions and/or confidence (or prediction) intervals on predictions Yann Hautier Predictions and/or confidence (or prediction) intervals on predictions Ben Bolker effective degrees of freedom Alan Haynes effective degrees of freedom

Tuesday, April 24, 2012 13 emails

Ben Bolker Gene expression lme Ben Bolker Nested longitudinal Angelina Mukherjee Gene expression lme Ben Bolker How to extract num. of observations and groups used in a mixed model using gee package david oseguera montiel How to extract num. of observations and groups used in a mixed model using gee package Robert Kushler Nested longitudinal Jarrod Hadfield MCMCglmm & multilevel multivariate models Ben Bolker How to extract num. of observations and groups used in a mixed model using gee package Robert Kushler How to extract num. of observations and groups used in a mixed model using gee package david oseguera montiel How to extract num. of observations and groups used in a mixed model using gee package David Winsemius How to extract num. of observations and groups used in a mixed model using gee package David Winsemius How to extract num. of observations and groups used in a mixed model using gee package Ben Bolker How to extract num. of observations and groups used in a mixed model using gee package

Monday, April 23, 2012 9 emails

david oseguera montiel How to extract num. of observations and groups used in a mixed model using gee package arun Nested longitudinal David Winsemius How to extract num. of observations and groups used in a mixed model using gee package david oseguera montiel How to extract num. of observations and groups used in a mixed model using gee package David Winsemius How to extract num. of observations and groups used in a mixed model using gee package Chuck Cleland How to extract num. of observations and groups used in a mixed model using gee package david oseguera montiel How to extract num. of observations and groups used in a mixed model using gee package Eiko Fried MCMCglmm & multilevel multivariate models Eiko Fried Multivariate Multilevel Mixed-Effects Model

Saturday, April 21, 2012 2 emails

Rafael Mares using MuMIn with glmmADMB Ben Bolker using MuMIn with glmmADMB

Friday, April 20, 2012 4 emails

Jarrod Hadfield MCMCglmm & multilevel multivariate models Karel Viaene How to test if two gamm-predictions are significantly different? Eiko Fried MCMCglmm & multilevel multivariate models Rafael Mares using MuMIn with glmmADMB

Wednesday, April 18, 2012 1 email

Jokel Meyer Mixed-model formulation: repeated-measures and covariate

Tuesday, April 17, 2012 6 emails

Steven Brady MCMC model selection reference Joehanes, Roby (NIH/NHLBI) [F] Patches for lme4 / pedigreemm Ben Bolker predictions from a binomial GLMM Malcolm Fairbrother predictions from a binomial GLMM Stuart Luppescu Time-varying vs. time-invariant covariates in longitudinal multivariate mixed-models Eiko Fried Time-varying vs. time-invariant covariates in longitudinal multivariate mixed-models

Monday, April 16, 2012 1 email

Jarrod Hadfield Prior for multi-response model MCMCglmm

Sunday, April 15, 2012 2 emails

Mirjam Amcoff Prior for multi-response model MCMCglmm Ben Bolker Random& fixed variables

Saturday, April 14, 2012 1 email

Justus Deikumah Random& fixed variables

Friday, April 13, 2012 15 emails

Ben Bolker Continuous variables interaction plot Shige Song Multivariate Multilevel Mixed-Effects Model Ben Bolker predictions from a binomial GLMM Tom_Philippi at nps.gov Multivariate Multilevel Mixed-Effects Model David Afshartous Multivariate Multilevel Mixed-Effects Model ONKELINX, Thierry Bug in lme4? ONKELINX, Thierry Bug in lme4? Malcolm Fairbrother Multivariate Multilevel Mixed-Effects Model Malcolm Fairbrother predictions from a binomial GLMM Renaud Lancelot lme4 broken ? Martin Maechler lme4 broken ? Renaud Lancelot lme4 broken ? Eiko Fried Multivariate Multilevel Mixed-Effects Model Martin Maechler lme4 broken ? Christoph Scherber gls and lme?

Thursday, April 12, 2012 7 emails

Renaud Lancelot lme4 broken ? Joehanes, Roby (NIH/NHLBI) [F] lme4 broken ? Renaud Lancelot lme4 broken ? Flores-de-Gracia, Eric Continuous variables interaction plot Charles Determan Jr gls and lme? Heidi Colleran Summarising Model fit using PML in R package 'blme' Alan Haynes gls and lme?

Wednesday, April 11, 2012 6 emails

C. E. Timothy Paine Loops lme4 Charles Determan Jr gls and lme? Drew Tyre Loops lme4 Joehanes, Roby (NIH/NHLBI) [F] Kinship vs. Pedigreemm David Duffy Kinship vs. Pedigreemm Jonas Klasen Kinship vs. Pedigreemm

Tuesday, April 10, 2012 7 emails

David Duffy Binary clustered data with negative intraclasscorrelation David Duffy Loops lme4 Justus Deikumah Loops lme4 Joehanes, Roby (NIH/NHLBI) [F] Questions about porting pedigreemm to the new lme4 Joehanes, Roby (NIH/NHLBI) [F] Kinship vs. Pedigreemm Ben Bolker Is there a final-ish format for lme4 objects now? Martin Maechler Is there a final-ish format for lme4 objects now?

Monday, April 9, 2012 6 emails

David Duffy Kinship vs. Pedigreemm Paul Johnson Is there a final-ish format for lme4 objects now? Federico Calboli Kinship vs. Pedigreemm Joehanes, Roby (NIH/NHLBI) [F] Kinship vs. Pedigreemm Federico Calboli Kinship vs. Pedigreemm Joehanes, Roby (NIH/NHLBI) [F] Kinship vs. Pedigreemm

Saturday, April 7, 2012 7 emails

Antoine Tremblay looping with multiple response variables lme4 Ben Bolker lme4.0 Joshua Wiley lme4.0 Ben Bolker lme4.0 Jarrod Hadfield Binary clustered data with negative intraclass correlation Douglas Bates Does glm (and glmer) no longer vectorize proportions when estimating a binomial GLM(M)? Renaud Lancelot lme4.0

Friday, April 6, 2012 5 emails

Joehanes, Roby (NIH/NHLBI) [F] looping with multiple response variables lme4 Henrik Hermansson Binary clustered data with negative intraclass correlation Reinhold Kliegl lme4.0 Ben Bolker lme4.0 Joshua Wiley lme4.0

Thursday, April 5, 2012 11 emails

Antonio P. Ramos lme4.0 Renaud Lancelot lme4.0 Ben Bolker lme4.0 Justus Deikumah looping with multiple response variables lme4 Antonio P. Ramos lme4.0 Michael Lawrence lme4.0 Antonio P. Ramos lme4.0 Jeremy Koster Does glm (and glmer) no longer vectorize proportions when estimating a binomial GLM(M)? Jarrod Hadfield MCMCglmm warning: observations with zero weight not used for calculating dispersion Julie Rushmore MCMCglmm warning: observations with zero weight not used for calculating dispersion Malcolm Fairbrother Xj correlated with Uj?

Wednesday, April 4, 2012 7 emails

Ben Bolker graphing fixed effects from mixed effects model jude girard graphing fixed effects from mixed effects model Ben Bolker Problem with lmer victoriah nyawira Problem with lmer Joehanes, Roby (NIH/NHLBI) [F] Questions about porting pedigreemm to the new lme4 Andrew Miles Xj correlated with Uj? Markus Jäntti Xj correlated with Uj?

Tuesday, April 3, 2012 6 emails

Joehanes, Roby (NIH/NHLBI) [F] Questions about porting pedigreemm to the new lme4 Ben Bolker Questions about porting pedigreemm to the new lme4 Joehanes, Roby (NIH/NHLBI) [F] Questions about porting pedigreemm to the new lme4 Malcolm Fairbrother Xj correlated with Uj? Joehanes, Roby (NIH/NHLBI) [F] Questions about porting pedigreemm to the new lme4 Dominick Samperi Group selection and multi-level modeling

Monday, April 2, 2012 13 emails

David Duffy Group selection and multi-level modeling Dominick Samperi Group selection and multi-level modeling Joehanes, Roby (NIH/NHLBI) [F] Questions about porting pedigreemm to the new lme4 Joehanes, Roby (NIH/NHLBI) [F] Questions about porting pedigreemm to the new lme4 Ben Bolker cannot connect to http://lme4.r-forge.r-project.org/repos/ Ben Bolker Questions about porting pedigreemm to the new lme4 Andrzej T Galecki 1 Questions about porting pedigreemm to the new lme4 Joehanes, Roby (NIH/NHLBI) [F] Questions about porting pedigreemm to the new lme4 Federico Calboli cannot connect to http://lme4.r-forge.r-project.org/repos/ Jeremy Koster Binomial GLMM -- denominator of proportion as fixed effect predictor? Ben Bolker interpreting random effects Martin Maechler lme4a installation Szymek Drobniak R-sig-mixed-models Digest, Vol 64, Issue 3

Sunday, April 1, 2012 12 emails

Ryan King MCMC model selection reference Denis Vile crossed effects with lmer but correlation structure with lme Joshua Wiley extracting gradient and hessian matrix from lme4 Daniel Hocking MCMC model selection reference Jarrod Hadfield MCMC model selection reference Antonio P. Ramos lme4a installation Ben Bolker extracting gradient and hessian matrix from lme4 Ben Bolker lme4a installation Peter Dalgaard repeated measures: lme(r) vs manova Steven J. Pierce MCMC model selection reference Keith Larson interpreting random effects Douglas Bates extracting gradient and hessian matrix from lme4

R-SIG-mixed-models April 2012