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R-SIG-mixed-models August 2012

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Friday, August 31, 2012 12 emails
Anthony Rietl Split plot design with repeated measures - model errors (nlme) Anthony Rietl Split plot design with repeated measures - model errors (nlme) Tom_Philippi at nps.gov Split plot design with repeated measures - model errors (nlme) Highland Statistics Ltd lme4 with Poisson Anthony Rietl Split plot design with repeated measures - model errors (nlme) Ben Bolker lme4 with Poisson Stuart Luppescu ordinal multilevel model Maciek Jacek Swat lme4 with Poisson Hester Lingsma ordinal multilevel model Mitchell Maltenfort lme4 with Poisson Douglas Bates lme4 with Poisson Joanna L Baker Phylogenetic Logistic Regression + MCMCglmm
Thursday, August 30, 2012 2 emails
Malcolm Fairbrother instrumenting for an Xj correlated with Uj David Atkins quick question regarding your "residual" command for your lmer command - please help me
Wednesday, August 29, 2012 9 emails
Ben Bolker Interpretation of effects Mikhail Matz MCMCglmm poisson / not poisson Mikhail Matz MCMCglmm poisson / not poisson Eiko Fried Interpretation of effects Jarrod Hadfield MCMCglmm poisson / not poisson Jarrod Hadfield MCMCglmm poisson / not poisson Douglas Bates lme4 book pdf Douglas Bates quick question regarding your "residual" command for your lmer command - please help me Highland Statistics Ltd Is there an R function for GLMM with binary, response, nested random factors, and temporal correlation?
Tuesday, August 28, 2012 8 emails
Mikhail Matz MCMCglmm poisson / not poisson Steve Taylor lme4 book pdf Jack Tanner lme4 book pdf Matt Pennell bayes factors for MCMCglmm Douglas Bates quick question regarding your "residual" command for your lmer command - please help me Rainer M Krug lme4 book pdf Kumiko Fukumura Dealing with heteroscedasticity in a GLM/M (Paul Johnson) Jarrod Hadfield bayes factors for MCMCglmm
Monday, August 27, 2012 13 emails
Andrew Digby Is there an R function for GLMM with binary response, nested random factors, and temporal correlation? Frank Savage Linear Mixed Model with Twin Data; Heteroscedasticity?‏ Ben Bolker bayes factors for MCMCglmm Jack Tanner lme4 book pdf Jack Tanner lme4 book pdf Frank Savage Linear Mixed Model with Twin Data; Heteroscedasticity?‏ Ben Bolker who shot the predict method (and did you shoot the deputy as well?) Jarrod Hadfield Questions about MCMCglmm and marker data Jarrod Hadfield MCMCglmm multinomial logit Paul Johnson Dealing with heteroscedasticity in a GLM/M Andreas Böck GLMM with mgcv::gam Andreas Böck GLMM with mgcv::gam Highland Statistics Ltd Dealing with heteroscedasticity in a GLM/M
Sunday, August 26, 2012 3 emails
Mikhail Matz bayes factors for MCMCglmm Jackson King MCMCglmm multinomial logit Paul Johnson who shot the predict method (and did you shoot the deputy as well?)
Saturday, August 25, 2012 1 email
Jarrod Hadfield Another MCMCglmm question - fixing correlations
Friday, August 24, 2012 3 emails
Jack Tanner working around glm.fit: "fitted probabilities numerically 0 or 1 occurred" Gary Dong Pseudo R squared S Ellison working around glm.fit: "fitted probabilities numerically 0 or 1 occurred"
Thursday, August 23, 2012 7 emails
Chris Howden working around glm.fit: "fitted probabilities numerically 0 or 1 occurred" Jack Tanner working around glm.fit: "fitted probabilities numerically 0 or 1 occurred" Rainer M Krug Question concerning anova() Emmanuel Curis Questions about MCMCglmm and marker data Marie Denis Questions about MCMCglmm and marker data Highland Statistics Ltd Dealing with heteroscedasticity in a GLM/M Markus Jäntti Dealing with heteroscedasticity in a GLM/M
Wednesday, August 22, 2012 12 emails
Alan Haynes Dealing with heteroscedasticity in a GLM/M Leila Brook Dealing with heteroscedasticity in a GLM/M Paul Bivand Will lmer/lme work for a model such as this? Henrik Singmann How to obtain Type 2 like p-values for effects? John Fox How to obtain Type 2 like p-values for effects? Henrik Singmann How to obtain Type 2 like p-values for effects? Jie use lme4 if given effects' design matrix Rainer M Krug Question concerning anova() Rainer M Krug Question concerning anova() Bert Gunter Question concerning anova() Rainer M Krug Question concerning anova() Highland Statistics Ltd Retrieve autocorrelation-corrected errors from gls (nlme) or, gamm (mgcv) (Daniel Malter)
Tuesday, August 21, 2012 2 emails
Daniel Malter Retrieve autocorrelation-corrected errors from gls (nlme) or gamm (mgcv) Malcolm Fairbrother Another MCMCglmm question - fixing correlations
Monday, August 20, 2012 2 emails
Kevin Parsons mixed effects nested repeated measures MANOVA Rune Haubo two questions about clmm
Sunday, August 19, 2012 2 emails
Baldwin, Jim -FS Including an offset in a binomial GLM/GLMM Leila Brook Including an offset in a binomial GLM/GLMM
Saturday, August 18, 2012 4 emails
MASAAKI Dear sir, Alan Haynes Question on Mixed Models Uisng R Hans Ekbrand random effect nested in the fixed effect Hans Ekbrand random effect nested in the fixed effect
Friday, August 17, 2012 3 emails
Li Li random effect nested in the fixed effect Douglas Bates lmer bug Li Li Question on Mixed Models Uisng R
Thursday, August 16, 2012 3 emails
Joehanes, Roby (NIH/NHLBI) [F] lmer bug Joehanes, Roby (NIH/NHLBI) [F] lmer bug Esther Schott Setting up interaction contrasts in lme4 generalized linear mixed model
Wednesday, August 15, 2012 4 emails
Douglas Bates unused argument(s) HELP Karina Villegas unused argument(s) HELP Douglas Bates unused argument(s) HELP Karina Villegas unused argument(s) HELP
Tuesday, August 14, 2012 2 emails
Tara Zamin Split plot design and repeated measures Baldwin, Jim -FS Including an offset in a binomial GLM/GLMM
Monday, August 13, 2012 5 emails
Leila Brook Including an offset in a binomial GLM/GLMM Joshua Wiley lmer logistic nested random effects Ben Pelzer lmer logistic nested random effects Kathleen Vancleef error applying user-defined link function to lmer Frazer Sinclair Controlling for non-independence in across population analyasis
Saturday, August 11, 2012 3 emails
Joshua Wiley Response variable with zero variance Ben Bolker Response variable with zero variance Tonya Haff Response variable with zero variance
Friday, August 10, 2012 8 emails
john benson correlations between fixed effects: groups or individuals for mixed models? David Duffy correlations between fixed effects: groups or individuals for mixed models? Kevin Hallgren Testing for significant intercept-slope correlation in nlme john benson correlations between fixed effects: groups or individuals for mixed models? ONKELINX, Thierry Response variable with zero variance ONKELINX, Thierry covariance matrix of fixed effects in lmer() matthias.suter at art.admin.ch covariance matrix of fixed effects in lmer() David Atkins Testing for significant intercept-slope correlation in nlme
Thursday, August 9, 2012 9 emails
John Maindonald multiple comparisons with MCMCglmm? Henrik Singmann announcing package afex: obtain p-values for all fixed effects in a lmer() model via KRmodcomp Highland Statistics Ltd Is there an R function for GLMM with binary Highland Statistics Ltd Is there an R function for GLMM with binary Kevin Hallgren Testing for significant intercept-slope correlation in nlme Tonya Haff Response variable with zero variance Douglas Bates Is there an R function for GLMM with binary response, nested random factors, and temporal correlation? Eduardo Martins Is there an R function for GLMM with binary mikhail matz multiple comparisons with MCMCglmm?
Wednesday, August 8, 2012 3 emails
Andrew Digby Is there an R function for GLMM with binary response, nested random factors, and temporal correlation? Frömmel, Ulrike How to handle measurement uncertainities with lmer Douglas Bates Is there an R function for GLMM with binary response, nested random factors, and temporal correlation?
Tuesday, August 7, 2012 3 emails
Andrew Digby Is there an R function for GLMM with binary response, nested random factors, and temporal correlation? Nadine Klauke pvals.fnc + lmer, discrepancy between pvalues Jarrod Hadfield code for multiple membership models?
Monday, August 6, 2012 11 emails
Emmanuel Curis convergence slot in glmer? Paul Bivand Model for irregular design George Leckie code for multiple membership models? Alexandre Martin convergence slot in glmer? Robert Long Extracting the posterior distribution for a random, effect in MCMCglmm Ned Dochtermann Extracting the posterior distribution for a random, effect in MCMCglmm Jarrod Hadfield Extracting the posterior distribution for a random effect in MCMCglmm Robert Long Extracting the posterior distribution for a random effect in MCMCglmm ONKELINX, Thierry Extracting the posterior distribution for a random effect in MCMCglmm Jarrod Hadfield Extracting the posterior distribution for a random effect in MCMCglmm Robert Long Extracting the posterior distribution for a random effect in MCMCglmm
Sunday, August 5, 2012 4 emails
Ben Bolker confusing error message Peter Dalgaard same within group std. error Jesus same within group std. error Victoria Buller confusing error message
Saturday, August 4, 2012 2 emails
Ben Bolker confusing error message Victoria Buller confusing error message
Friday, August 3, 2012 5 emails
Ben Bolker basic question Tom_Philippi at nps.gov reaped measures with unequal intervals Malcolm Fairbrother two questions about clmm Rachel Cohen basic question Saunders, Michael R Question on statistical methods in manuscript
Thursday, August 2, 2012 3 emails
Baldwin, Jim -FS basic question Ben Bolker basic question Robert Long MCMCglmm non-informative prior
Wednesday, August 1, 2012 7 emails
Ben Bolker basic question John Maindonald lme4 - GLMM dispersion parameter? Rachel Cohen basic question Ben Bolker lme4 - GLMM dispersion parameter? Liam Crowther (BIO) lme4 - GLMM dispersion parameter? Jarrod Hadfield MCMCglmm zero-altered Brickhill, Daisy MCMCglmm zero-altered