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R-SIG-mixed-models May 2013

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LMER False Convergence (8)
2 msgs
Daniel Anderson LMER False Convergence (8) May 31, 2013
Ben Bolker LMER False Convergence (8) May 31, 2013
request
9 msgs
Champika Shyamalie Kariyawasam request May 27, 2013
Seth Bigelow request May 28, 2013
Robert Long Design Matrix for Random effects May 28, 2013
Steve Walker Design Matrix for Random effects May 28, 2013
Robert Long Design Matrix for Random effects May 28, 2013
Steven McKinney request May 28, 2013
David Winsemius request May 28, 2013
Henrik Singmann Design Matrix for Random effects May 29, 2013
Ben Bolker Design Matrix for Random effects May 31, 2013
help with simulations
1 msg
Chaitanya Acharya help with simulations May 31, 2013
LMER False Convergence (8)
2 msgs
Daniel Anderson LMER False Convergence (8) May 31, 2013
Ben Bolker LMER False Convergence (8) May 31, 2013
three-levels of nesting in poisson mixed effect regression?
1 msg
Rzhetsky, Andrey [BSD] - MED three-levels of nesting in poisson mixed effect regression? May 31, 2013
LMER False Convergence (8)
2 msgs
Daniel Anderson LMER False Convergence (8) May 30, 2013
Ben Bolker LMER False Convergence (8) May 30, 2013
help with simulations
1 msg
Chaitanya Acharya help with simulations May 30, 2013
Confidence intervals in GAMM4
1 msg
Rodrigo Tardin Confidence intervals in GAMM4 May 30, 2013
random slope models with several terms with the same grouping variable
2 msgs
Hans Ekbrand random slope models with several terms with the same grouping variable May 29, 2013
Hans Ekbrand random slope models with several terms with the same grouping variable May 30, 2013
Separating random effects variance for two groups
1 msg
Stephen T Separating random effects variance for two groups May 30, 2013
Duplicating SAS Proc HPMixed results in lme 4 and lmerTest
6 msgs
Price, Josh Duplicating SAS Proc HPMixed results in lme 4 and lmerTest May 28, 2013
Luca Borger Duplicating SAS Proc HPMixed results in lme 4 and lmerTest May 28, 2013
Price, Josh Duplicating SAS Proc HPMixed results in lme 4 and lmerTest May 28, 2013
Luca Borger Duplicating SAS Proc HPMixed results in lme 4 and lmerTest May 28, 2013
Douglas Bates Duplicating SAS Proc HPMixed results in lme 4 and lmerTest May 29, 2013
Price, Josh Duplicating SAS Proc HPMixed results in lme 4 and lmerTest May 29, 2013
MCMCglmm bivariate random regression
1 msg
Adam Hayward MCMCglmm bivariate random regression May 29, 2013
Error in glmmADMB
3 msgs
Boris Berkhout Error in glmmADMB May 26, 2013
Ben Bolker Error in glmmADMB May 27, 2013
Ben Bolker Error in glmmADMB May 28, 2013
Testing for differences in random effects between two groups
1 msg
Stephen T Testing for differences in random effects between two groups May 28, 2013
Testing for differences in random effects between two groups
1 msg
Stephen T Testing for differences in random effects between two groups May 27, 2013
zero-inflated models with spatial autocorrelation
1 msg
Malcolm Fairbrother zero-inflated models with spatial autocorrelation May 24, 2013
MCMCglmm different random effects specifications
1 msg
Ian Cleasby MCMCglmm different random effects specifications May 24, 2013
Subject: Re: zero-inflated models with spatial autocorrelation
1 msg
robert bagchi Subject: Re: zero-inflated models with spatial autocorrelation May 24, 2013
zero-inflated models with spatial autocorrelation
3 msgs
Ricardo Lima zero-inflated models with spatial autocorrelation May 23, 2013
Ben Bolker zero-inflated models with spatial autocorrelation May 23, 2013
Ricardo Lima zero-inflated models with spatial autocorrelation May 24, 2013
categorical random effects correlation in lme4
6 msgs
Malcolm Fairbrother categorical random effects correlation in lme4 May 21, 2013
Andrew McAleavey categorical random effects correlation in lme4 May 22, 2013
Malcolm Fairbrother categorical random effects correlation in lme4 May 23, 2013
Andrew McAleavey categorical random effects correlation in lme4 May 23, 2013
Henrik Singmann categorical random effects correlation in lme4 May 23, 2013
Henrik Singmann categorical random effects correlation in lme4 May 23, 2013
"contrasts apply only to factors" in post-hoc analysis afer lmer fitting
1 msg
Helios de Rosario "contrasts apply only to factors" in post-hoc analysis afer lmer fitting May 22, 2013
previous posts about error message in glmmADMB
4 msgs
Julia Sommerfeld previous posts about error message in glmmADMB May 20, 2013
Ben Bolker previous posts about error message in glmmADMB May 20, 2013
Ben Bolker previous posts about error message in glmmADMB May 21, 2013
Julia Sommerfeld previous posts about error message in glmmADMB May 22, 2013
categorical random effects correlation in lme4
2 msgs
Andrew McAleavey categorical random effects correlation in lme4 May 21, 2013
Henrik Singmann categorical random effects correlation in lme4 May 22, 2013
multivariate MCMCglmm problem
2 msgs
Raphael Royaute multivariate MCMCglmm problem May 21, 2013
David Duffy multivariate MCMCglmm problem May 21, 2013
Inference from glmmadmb output - bayesian inference not possible?
1 msg
Julia Sommerfeld Inference from glmmadmb output - bayesian inference not possible? May 21, 2013
Enc: getting residuals from model averaging
1 msg
Filipe Carvalho Enc: getting residuals from model averaging May 21, 2013
multivariate MCMCglmm problem
1 msg
Thomas Merkling multivariate MCMCglmm problem May 21, 2013
previous posts about error message in glmmADMB
1 msg
Julia Sommerfeld previous posts about error message in glmmADMB May 20, 2013
slightly OT: SAS help
4 msgs
Ben Bolker slightly OT: SAS help May 17, 2013
Baldwin, Jim -FS slightly OT: SAS help May 17, 2013
Daniel Nordlund slightly OT: SAS help May 17, 2013
Steve Denham slightly OT: SAS help May 20, 2013
Question about Multilevel ZIP model with glmmADMB
1 msg
Julia Sommerfeld Question about Multilevel ZIP model with glmmADMB May 20, 2013
Fixing residual variance in MCMCglmm
1 msg
Adam Hayward Fixing residual variance in MCMCglmm May 20, 2013
multivariate mixed model question
1 msg
Chaitanya Acharya multivariate mixed model question May 19, 2013
Problems running lmer
4 msgs
Andrea Goijman Problems running lmer May 17, 2013
Philippi, Tom Problems running lmer May 17, 2013
Andrea Goijman Problems running lmer May 17, 2013
Hugo.Mildenberger at web.de Problems running lmer May 18, 2013
plots for GLM email sorry
1 msg
Milos Blagojevic plots for GLM email sorry May 17, 2013
searching nlme source code to try turning off range bounds of > 0 for corExp
2 msgs
Seth Myers searching nlme source code to try turning off range bounds of > 0 for corExp May 16, 2013
Ben Bolker searching nlme source code to try turning off range bounds of > 0 for corExp May 17, 2013
Multivariate Response Model in MCMCglmm - Estimating Posterior Correlation Between Traits
1 msg
Xavier Harrison Multivariate Response Model in MCMCglmm - Estimating Posterior Correlation Between Traits May 17, 2013
GLM model evaluation
1 msg
Milos Blagojevic GLM model evaluation May 17, 2013
hurdle models
4 msgs
Matias Ledesma hurdle models May 15, 2013
Mark Greenaway hurdle models May 15, 2013
Mark Greenaway hurdle models May 15, 2013
Ben Bolker hurdle models May 16, 2013
Spatially autocorrelated random effects in logistic regression.
1 msg
Hugh Sturrock Spatially autocorrelated random effects in logistic regression. May 16, 2013
p-value for fixed factor in lmer
8 msgs
Volker Dellwo p-value for fixed factor in lmer May 15, 2013
Jonathan Baron p-value for fixed factor in lmer May 15, 2013
Philippi, Tom p-value for fixed factor in lmer May 15, 2013
Luca Borger p-value for fixed factor in lmer May 15, 2013
robert.espesser at lpl-aix.fr p-value for fixed factor in lmer May 15, 2013
marKo p-value for fixed factor in lmer May 15, 2013
Henrik Singmann p-value for fixed factor in lmer May 16, 2013
Douglas Bates p-value for fixed factor in lmer May 16, 2013
R-sig-mixed-models Digest, Vol 77, Issue 11
3 msgs
Volker Dellwo R-sig-mixed-models Digest, Vol 77, Issue 11 May 15, 2013
Jake Westfall R-sig-mixed-models Digest, Vol 77, Issue 11 May 15, 2013
Douglas Bates R-sig-mixed-models Digest, Vol 77, Issue 11 May 15, 2013
Properly dealing with study design
2 msgs
Tom Bishop Properly dealing with study design May 14, 2013
Ludovico Frate Properly dealing with study design May 15, 2013
MCMCglmm with datasets of different lengths
4 msgs
Ingleby, Fiona MCMCglmm with datasets of different lengths May 1, 2013
David Duffy MCMCglmm with datasets of different lengths May 1, 2013
David Duffy MCMCglmm with datasets of different lengths May 8, 2013
Volker Dellwo MCMCglmm with datasets of different lengths May 15, 2013
Mixed model with nested random effect and repeated measures
1 msg
Diogo B. Provete Mixed model with nested random effect and repeated measures May 14, 2013
GLS, as.formula and subsitute
3 msgs
Christoph Scherber GLS, as.formula and subsitute May 14, 2013
Emmanuel Curis GLS, as.formula and subsitute May 14, 2013
Sven Hohenstein GLS, as.formula and subsitute May 14, 2013
using gnls in nlme package to model negative spatial autocorrelation?
1 msg
Seth Myers using gnls in nlme package to model negative spatial autocorrelation? May 13, 2013
Multiple models on same data: including even non-significant random effects?
1 msg
Laura Suttle Multiple models on same data: including even non-significant random effects? May 13, 2013
Re(5): skolenik
1 msg
Joe King Re(5): skolenik May 12, 2013
MCMCglmm model with 2 datasets
1 msg
Ingleby, Fiona MCMCglmm model with 2 datasets May 9, 2013
mixed-models problem
2 msgs
Volker Dellwo mixed-models problem May 8, 2013
Jake Westfall mixed-models problem May 8, 2013
lme4 with proportion data and lack of fir otherwise
2 msgs
Seth Bigelow lme4 with proportion data and lack of fir otherwise May 8, 2013
Milos Blagojevic lme4 with proportion data and lack of fir otherwise May 8, 2013
MCMCglmm model with 2 datasets
1 msg
Ingleby, Fiona MCMCglmm model with 2 datasets May 8, 2013
lme4 with proportion data and lack of fir otherwise
2 msgs
Milos Blagojevic lme4 with proportion data and lack of fir otherwise May 6, 2013
Seth Bigelow lme4 with proportion data and lack of fir otherwise May 7, 2013
variance structure of random effects using lme
1 msg
Donegan, Sarah variance structure of random effects using lme May 7, 2013
Spatially autocorrelated random effects
1 msg
Hugh Sturrock Spatially autocorrelated random effects May 6, 2013
Fixed covariates in nlmer()
1 msg
Marko Bachl Fixed covariates in nlmer() May 6, 2013
Forcing mixed models through origin
1 msg
Boulanger, Yan Forcing mixed models through origin May 6, 2013
MLM Output in nlme: Searching for coefficients to bootstrap mediation in a MLM with random intercept & random slope (to use with code generator at www.quantpsy.org)
1 msg
Gerteis, Ann Kathrin Sophie (1114xxx) MLM Output in nlme: Searching for coefficients to bootstrap mediation in a MLM with random intercept & random slope (to use with code generator at www.quantpsy.org) May 6, 2013
Ok with a "small amount" of non-normality?
6 msgs
Boulanger, Yan Ok with a "small amount" of non-normality? May 3, 2013
Andrew Robinson Ok with a "small amount" of non-normality? May 3, 2013
John Maindonald Ok with a "small amount" of non-normality? May 3, 2013
Greg Snow Ok with a "small amount" of non-normality? May 4, 2013
John Maindonald Ok with a "small amount" of non-normality? May 4, 2013
Boulanger, Yan Ok with a "small amount" of non-normality? May 6, 2013
parameter estimation in lmer model
1 msg
Soner Iscan parameter estimation in lmer model May 6, 2013
groupedData plots (nlme)
1 msg
Omnia Abdulrazeg groupedData plots (nlme) May 4, 2013
lme4: log likelihoods for glmer using Laplace approx versus Gauss-Hermite, binary data
1 msg
Mary Lesperance lme4: log likelihoods for glmer using Laplace approx versus Gauss-Hermite, binary data May 3, 2013
Approximate standard error for variance component with lmer
2 msgs
Jehredy Approximate standard error for variance component with lmer May 3, 2013
Douglas Bates Approximate standard error for variance component with lmer May 3, 2013
Which model to use?
1 msg
Benjamin Gillespie Which model to use? May 3, 2013
MCMCglmm with datasets of different lengths
1 msg
Ingleby, Fiona MCMCglmm with datasets of different lengths May 3, 2013
MCMCglmm with datasets of different lengths
2 msgs
Ingleby, Fiona MCMCglmm with datasets of different lengths May 2, 2013
David Duffy MCMCglmm with datasets of different lengths May 2, 2013
Appropriate random effects structure ?
1 msg
Josh Dorrough Appropriate random effects structure ? May 2, 2013
Re; skolenik
1 msg
Joe King Re; skolenik May 2, 2013
mixed effects model: R error
1 msg
Omnia Abdulrazeg mixed effects model: R error May 2, 2013
Calculating HPD for marginal effects of interactions of lmer models
2 msgs
Tomas Note Calculating HPD for marginal effects of interactions of lmer models May 1, 2013
Joshua Wiley Calculating HPD for marginal effects of interactions of lmer models May 1, 2013