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R-SIG-mixed-models October 2013

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Adrien Combaz

Last active: Oct 11, 2013
3 msgs
Adrien Combaz model for clustered longitudinal binary data Oct 8, 2013 Adrien Combaz model for clustered longitudinal binary data Oct 9, 2013 Adrien Combaz model for clustered longitudinal binary data Oct 11, 2013

Alexandra Kuznetsova

Last active: Oct 9, 2013
1 msg
Alexandra Kuznetsova bug in refit function? Oct 9, 2013

Anders Tisell

Last active: Oct 17, 2013
1 msg
Anders Tisell Save estimates as CSV Oct 17, 2013

Austin, Matt

Last active: Oct 16, 2013
1 msg
Austin, Matt GLMM question Oct 16, 2013

Bayes Student

Last active: Oct 9, 2013
1 msg
Bayes Student random slopes and intercepts using glmmadmb - negative binomial Oct 9, 2013

Ben Bolker

Last active: Oct 31, 2013
44 msgs
Ben Bolker glmmADMB Oct 1, 2013 Ben Bolker glmmADMB Oct 1, 2013 Ben Bolker mixed modelling with random effects with different correlation structures? GLMM/GEE mix Oct 1, 2013 Ben Bolker Why does anova.merMod use refit? Oct 2, 2013 Ben Bolker Why does anova.merMod use refit? Oct 2, 2013 Ben Bolker errors compiling minqa during lme4 install Oct 4, 2013 Ben Bolker interpretation of an individual-level random effect Oct 4, 2013 Ben Bolker errors compiling minqa during lme4 install Oct 5, 2013 Ben Bolker errors compiling minqa during lme4 install Oct 7, 2013 Ben Bolker stability of glmmADMB Oct 8, 2013 Ben Bolker model for clustered longitudinal binary data Oct 8, 2013 Ben Bolker plot log transformed variable with Effects package Oct 9, 2013 Ben Bolker bug in refit function? Oct 9, 2013 Ben Bolker model for clustered longitudinal binary data Oct 9, 2013 Ben Bolker random slopes and intercepts using glmmadmb - negative binomial Oct 9, 2013 Ben Bolker plot log transformed variable with Effects package Oct 9, 2013 Ben Bolker bug in refit function? Oct 10, 2013 Ben Bolker Calcul of confidence intervals of estimate coefficient by a logistic regression with random effect Oct 11, 2013 Ben Bolker glmmadmb- problems with explanatory variable with a lot of zeros? Oct 11, 2013 Ben Bolker Issue with experimental design? Oct 13, 2013 Ben Bolker effect sizes in lmer Oct 13, 2013 Ben Bolker When is sparseX implementation expected? Oct 15, 2013 Ben Bolker AIC calculation Oct 15, 2013 Ben Bolker AIC calculation Oct 15, 2013 Ben Bolker GLMM question Oct 16, 2013 Ben Bolker how to get confidence intervals in using glmer in lme4 package? Oct 16, 2013 Ben Bolker Error in glmmadmb: could not find function Oct 17, 2013 Ben Bolker Warning in rankMatrix(X) Oct 17, 2013 Ben Bolker Zero random effect variance? Oct 17, 2013 Ben Bolker Zero random effect variance? Oct 17, 2013 Ben Bolker R-sig-mixed-models Digest, Vol 82, Issue 31 Oct 21, 2013 Ben Bolker pwrssUpdate Error with new version of lme4 Oct 21, 2013 Ben Bolker What does "number of groups < 50" Oct 22, 2013 Ben Bolker warning computing profile confidence intervals with confint() Oct 22, 2013 Ben Bolker lme4 and confidence intervals Oct 23, 2013 Ben Bolker lme4 and confidence intervals Oct 23, 2013 Ben Bolker lme4 and confidence intervals Oct 23, 2013 Ben Bolker What does "number of groups < 50" Oct 24, 2013 Ben Bolker GAMM4: In mer_finalize(ans) : false convergence (8) Oct 24, 2013 Ben Bolker lme: predictions variance collapses when one more level is added Oct 25, 2013 Ben Bolker lme: predictions variance collapses when one more level is added Oct 27, 2013 Ben Bolker Problems with lme random slope+intercept model Oct 28, 2013 Ben Bolker behavior of na.action = na.exclude using lmer in lme4 1.0-5 inconsistent with lm and with older versions of lme4 Oct 30, 2013 Ben Bolker How to compute a correlation between two time ranges? Oct 31, 2013

Ben Pelzer

Last active: Oct 25, 2013
1 msg
Ben Pelzer warning glmer Oct 25, 2013

Catherine Bois

Last active: Oct 16, 2013
1 msg
Catherine Bois nlme Oct 16, 2013

Chris Howden

Last active: Oct 15, 2013
1 msg
Chris Howden Variances of higher-order vs. lower-order random terms Oct 15, 2013

Cole, Tim

Last active: Oct 21, 2013
1 msg
Cole, Tim R-sig-mixed-models Digest, Vol 82, Issue 31 Oct 21, 2013

Dan McCloy

Last active: Oct 7, 2013
4 msgs
Dan McCloy errors compiling minqa during lme4 install Oct 3, 2013 Dan McCloy errors compiling minqa during lme4 install Oct 5, 2013 Dan McCloy errors compiling minqa during lme4 install Oct 6, 2013 Dan McCloy errors compiling minqa during lme4 install Oct 7, 2013

Daniel Fountain

Last active: Oct 21, 2013
1 msg
Daniel Fountain lme4 sanple size analysis / power analysis by simulation and confidence intervals - A request to check the approach Oct 21, 2013

Dave Marvin

Last active: Oct 17, 2013
7 msgs
Dave Marvin Unrealistic fixed effect coefficients Oct 14, 2013 Dave Marvin Unrealistic fixed effect coefficients Oct 15, 2013 Dave Marvin nlme Oct 16, 2013 Dave Marvin Very large standard errors in lmer Oct 16, 2013 Dave Marvin Zero random effect variance? Oct 17, 2013 Dave Marvin Zero random effect variance? Oct 17, 2013 Dave Marvin Zero random effect variance? Oct 17, 2013

David Duffy

Last active: Oct 20, 2013
4 msgs
David Duffy Maximum nAGQ=25? Sep 30, 2013 David Duffy mixed modelling with random effects with differentcorrelation structures? GLMM/GEE mix Oct 2, 2013 David Duffy Zero random effect variance? Oct 17, 2013 David Duffy equality constraints in lmer/lme4 Oct 20, 2013

David Kane

Last active: Oct 29, 2013
1 msg
David Kane behavior of na.action = na.exclude using lmer in lme4 1.0-5 inconsistent with lm and with older versions of lme4 Oct 29, 2013

David Winsemius

Last active: Oct 22, 2013
5 msgs
David Winsemius effect sizes in lmer Oct 12, 2013 David Winsemius Issue with experimental design? Oct 13, 2013 David Winsemius equality constraints in lmer/lme4 Oct 21, 2013 David Winsemius equality constraints in lmer/lme4 Oct 21, 2013 David Winsemius lme4 sanple size analysis / power analysis by simulation ... Oct 22, 2013

Dieter Menne

Last active: Oct 29, 2013
4 msgs
Dieter Menne lme: predictions variance collapses when one more level is added Oct 25, 2013 Dieter Menne lme: predictions variance collapses when one more level is added Oct 27, 2013 Dieter Menne lme: predictions variance collapses when one more level is added Oct 27, 2013 Dieter Menne lme: predictions variance collapses when one more level is added Oct 29, 2013

Dominique CARVAL

Last active: Oct 3, 2013
1 msg
Dominique CARVAL interpretation of an individual-level random effect Oct 3, 2013

Doran, Harold

Last active: Oct 15, 2013
1 msg
Doran, Harold When is sparseX implementation expected? Oct 15, 2013

Douglas Bates

Last active: Oct 16, 2013
5 msgs
Douglas Bates Why does anova.merMod use refit? Oct 2, 2013 Douglas Bates mer summary not an S4 object?? Oct 7, 2013 Douglas Bates When is sparseX implementation expected? Oct 15, 2013 Douglas Bates nlme Oct 16, 2013 Douglas Bates nlme Oct 16, 2013

Elizabeth Graham

Last active: Oct 26, 2013
4 msgs
Elizabeth Graham Error structure for split-split plot with treatment across blocks Oct 21, 2013 Elizabeth Graham Error structure for split-split plot with treatment across blocks Oct 21, 2013 Elizabeth Graham Error structure for split-split plot with treatment across blocks Oct 22, 2013 Elizabeth Graham confidence intervals on predictions from lme Oct 26, 2013

Emmanuel Curis

Last active: Oct 29, 2013
1 msg
Emmanuel Curis What does "number of groups < 50" Oct 29, 2013

Ewart Thomas

Last active: Oct 20, 2013
1 msg
Ewart Thomas equality constraints in lmer/lme4 Oct 20, 2013

Gabriel Baud-Bovy

Last active: Oct 17, 2013
5 msgs
Gabriel Baud-Bovy lmer specification for maximal random effects structure and one-between and two within-subject factors Oct 5, 2013 Gabriel Baud-Bovy lmer specification for maximal random effects structure and one-between and two within-subject factors Oct 6, 2013 Gabriel Baud-Bovy lmer specification for random effects with several within-subject factors Oct 7, 2013 Gabriel Baud-Bovy Random intercepts and/or slopes Oct 10, 2013 Gabriel Baud-Bovy Save estimates as CSV Oct 17, 2013

Gabrielle Davidson

Last active: Oct 17, 2013
2 msgs
Gabrielle Davidson Error in glmmadmb: could not find function "paste0" Oct 17, 2013 Gabrielle Davidson Error in glmmadmb: could not find function "paste0" Oct 17, 2013

Greg Snow

Last active: Oct 21, 2013
2 msgs
Greg Snow equality constraints in lmer/lme4 Oct 21, 2013 Greg Snow equality constraints in lmer/lme4 Oct 21, 2013

Haldre Rogers

Last active: Oct 31, 2013
1 msg
Haldre Rogers contrasts and interactions with multi-level factors in glmer Oct 31, 2013

Hamberg Leena (METLA)

Last active: Oct 16, 2013
1 msg
Hamberg Leena (METLA) GLMM question Oct 16, 2013

Henrik Singmann

Last active: Oct 13, 2013
4 msgs
Henrik Singmann Why does anova.merMod use refit? Oct 2, 2013 Henrik Singmann Why does anova.merMod use refit? Oct 2, 2013 Henrik Singmann effect sizes in lmer Oct 13, 2013 Henrik Singmann effect sizes in lmer Oct 13, 2013

Highland Statistics Ltd

Last active: Oct 24, 2013
3 msgs
Highland Statistics Ltd Call of interest: mixed modelling course in Quebec City Oct 14, 2013 Highland Statistics Ltd Zero-inflated binomial (ZIB) models in glmmADMB:, warnings and errors Oct 23, 2013 Highland Statistics Ltd Course: Mixed modelling (with intro MCMC) Oct 24, 2013

Iasonas Lamprianou

Last active: Oct 21, 2013
1 msg
Iasonas Lamprianou R-sig-mixed-models Digest, Vol 82, Issue 31 Oct 21, 2013

Jake Westfall

Last active: Oct 31, 2013
8 msgs
Jake Westfall intraclass correlation (ICC) for random intercept and slope model Oct 3, 2013 Jake Westfall intraclass correlation (ICC) for random intercept and Oct 6, 2013 Jake Westfall effect sizes in lmer Oct 13, 2013 Jake Westfall Unrealistic fixed effect coefficients Oct 14, 2013 Jake Westfall Variances of higher-order vs. lower-order random terms Oct 15, 2013 Jake Westfall Variances of higher-order vs. lower-order random terms Oct 15, 2013 Jake Westfall GLMM question Oct 16, 2013 Jake Westfall ICC on random slopes in mixed logistic regression Oct 31, 2013

Jarrod Hadfield

Last active: Oct 8, 2013
1 msg
Jarrod Hadfield MCMCglmm random intercept/slope model and credible intervals Oct 8, 2013

Jean-Philippe Laurenceau

Last active: Oct 21, 2013
3 msgs
Jean-Philippe Laurenceau equality constraints in lmer/lme4 Oct 20, 2013 Jean-Philippe Laurenceau equality constraints in lmer/lme4 Oct 20, 2013 Jean-Philippe Laurenceau equality constraints in lmer/lme4 Oct 21, 2013

Johannes Radinger

Last active: Oct 18, 2013
1 msg
Johannes Radinger pwrssUpdate Error with new version of lme4 Oct 18, 2013

John Fox

Last active: Oct 16, 2013
2 msgs
John Fox plot log transformed variable with Effects package Oct 9, 2013 John Fox nlme Oct 16, 2013

John.Morrongiello at csiro.au

Last active: Oct 10, 2013
5 msgs
John.Morrongiello at csiro.au intraclass correlation (ICC) for random intercept and slope model Oct 3, 2013 John.Morrongiello at csiro.au intraclass correlation (ICC) for random intercept and Oct 6, 2013 John.Morrongiello at csiro.au intraclass correlation (ICC) for random intercept and slope model Oct 7, 2013 John.Morrongiello at csiro.au plot log transformed variable with Effects package Oct 8, 2013 John.Morrongiello at csiro.au plot log transformed variable with Effects Oct 10, 2013

Joshua Hartshorne

Last active: Oct 13, 2013
3 msgs
Joshua Hartshorne effect sizes in lmer Oct 12, 2013 Joshua Hartshorne effect sizes in lmer Oct 12, 2013 Joshua Hartshorne effect sizes in lmer Oct 13, 2013

Joshua Wiley

Last active: Oct 12, 2013
1 msg
Joshua Wiley Issue with experimental design? Oct 12, 2013

Juan Kamienkowski

Last active: Oct 18, 2013
2 msgs
Juan Kamienkowski Warning in rankMatrix(X) Oct 17, 2013 Juan Kamienkowski Warning in rankMatrix(X) Oct 18, 2013

Kevin E. Thorpe

Last active: Oct 22, 2013
1 msg
Kevin E. Thorpe lme4 sanple size analysis / power analysis by simulation ... Oct 22, 2013

Kevin Wright

Last active: Oct 17, 2013
3 msgs
Kevin Wright nlme Oct 16, 2013 Kevin Wright nlme Oct 16, 2013 Kevin Wright Error in glmmadmb: could not find function "paste0" Oct 17, 2013

Laetitia ETIENNE

Last active: Oct 11, 2013
1 msg
Laetitia ETIENNE Calcul of confidence intervals of estimate coefficient by a logistic regression with random effect Oct 11, 2013

Lenth, Russell V

Last active: Oct 22, 2013
3 msgs
Lenth, Russell V R-sig-mixed-models Digest, Vol 82, Issue 25 Oct 16, 2013 Lenth, Russell V lme4 sanple size analysis / power analysis by simulation ... Oct 22, 2013 Lenth, Russell V lme4 sanple size analysis / power analysis by simulation ... Oct 22, 2013

Liaw, Andy

Last active: Oct 16, 2013
1 msg
Liaw, Andy nlme Oct 16, 2013

Mabille, Geraldine

Last active: Oct 15, 2013
3 msgs
Mabille, Geraldine glmmadmb- problems with explanatory variable with a lot of zeros? Oct 11, 2013 Mabille, Geraldine glmmadmb- problems with explanatory variable with a lot of zeros? Oct 11, 2013 Mabille, Geraldine glmmadmb- problems with explanatory variable with a lot of zeros? Oct 15, 2013

Maria Helena Mourino Silva Nunes

Last active: Oct 11, 2013
2 msgs
Maria Helena Mourino Silva Nunes Random intercepts and/or slopes Oct 10, 2013 Maria Helena Mourino Silva Nunes Random intercepts and/or slopes Oct 11, 2013

Maria Paola Bissiri

Last active: Oct 28, 2013
2 msgs
Maria Paola Bissiri What does "number of groups < 50" Oct 24, 2013 Maria Paola Bissiri What does "number of groups < 50" Oct 28, 2013

Martin Leclerc

Last active: Oct 31, 2013
1 msg
Martin Leclerc ICC on random slopes in mixed logistic regression Oct 31, 2013

Maya

Last active: Oct 7, 2013
1 msg
Maya MCMCglmm random intercept/slope model and credible intervals Oct 7, 2013

Muldoon, Ariel

Last active: Oct 14, 2013
2 msgs
Muldoon, Ariel implications fitting random-only slopes Oct 10, 2013 Muldoon, Ariel implications fitting random-only slopes Oct 14, 2013

Pantelis Z. Hadjipantelis

Last active: Oct 6, 2013
2 msgs
Pantelis Z. Hadjipantelis errors compiling minqa during lme4 install Oct 5, 2013 Pantelis Z. Hadjipantelis errors compiling minqa during lme4 install Oct 6, 2013

Pau Boon Kee

Last active: Oct 5, 2013
1 msg
Pau Boon Kee stability of glmmADMB Oct 5, 2013

Pete Meyer

Last active: Oct 14, 2013
1 msg
Pete Meyer When is sparseX implementation expected? Oct 14, 2013

Peter Pearman

Last active: Oct 21, 2013
1 msg
Peter Pearman MCMCglmm model and prior specification-incomplete sampling of blocks Oct 21, 2013

Rachael Orben

Last active: Oct 10, 2013
1 msg
Rachael Orben pwrssUpdate Error with new version of lme4 Oct 10, 2013

Roman Luštrik

Last active: Oct 1, 2013
1 msg
Roman Luštrik glmmADMB Oct 1, 2013

S Ellison

Last active: Oct 22, 2013
2 msgs
S Ellison Error structure for split-split plot with treatment across blocks Oct 21, 2013 S Ellison Error structure for split-split plot with treatment across blocks Oct 22, 2013

Seth Bigelow

Last active: Oct 16, 2013
2 msgs
Seth Bigelow Unrealistic fixed effect coefficients Oct 15, 2013 Seth Bigelow Very large standard errors in lmer Oct 16, 2013

Sol Lago

Last active: Oct 22, 2013
3 msgs
Sol Lago confidence intervals from lmer() with random correlation parameters Oct 19, 2013 Sol Lago warning computing profile confidence intervals with confint() Oct 22, 2013 Sol Lago warning computing profile confidence intervals with confint() Oct 22, 2013

Stefan Ferger

Last active: Oct 24, 2013
2 msgs
Stefan Ferger Zero-inflated binomial (ZIB) models in glmmADMB: warnings and errors Oct 23, 2013 Stefan Ferger Zero-inflated binomial (ZIB) models in glmmADMB: warnings and errors Oct 24, 2013

Steve Denham

Last active: Oct 21, 2013
1 msg
Steve Denham Error structure for split-split plot with treatment across blocks Oct 21, 2013

Steve Walker

Last active: Oct 25, 2013
2 msgs
Steve Walker confidence intervals from lmer() with random correlation parameters Oct 22, 2013 Steve Walker warning glmer Oct 25, 2013

Steven J. Pierce

Last active: Oct 14, 2013
1 msg
Steven J. Pierce effect sizes in lmer Oct 14, 2013

Steven McKinney

Last active: Oct 22, 2013
1 msg
Steven McKinney lme4 sanple size analysis / power analysis by simulation ... Oct 22, 2013

Stuart Luppescu

Last active: Oct 7, 2013
1 msg
Stuart Luppescu mer summary not an S4 object?? Oct 7, 2013

Ted Wright

Last active: Oct 12, 2013
1 msg
Ted Wright Issue with experimental design? Oct 12, 2013

Tetsuya Michinaka

Last active: Oct 9, 2013
1 msg
Tetsuya Michinaka How to explain the difference of variables in random effects component Oct 9, 2013

Tobias Heed

Last active: Oct 31, 2013
5 msgs
Tobias Heed lmer specification for maximal random effects structure and one-between and two within-subject factors Oct 6, 2013 Tobias Heed implications fitting random-only slopes Oct 11, 2013 Tobias Heed Error structure for split-split plot with treatment across blocks Oct 22, 2013 Tobias Heed r-sig-models@r-project.org Oct 31, 2013 Tobias Heed wrong post Oct 31, 2013

Viechtbauer Wolfgang (STAT)

Last active: Oct 17, 2013
2 msgs
Viechtbauer Wolfgang (STAT) Random intercepts and/or slopes Oct 10, 2013 Viechtbauer Wolfgang (STAT) Update to 'metafor' Package Oct 17, 2013

Yla Savh

Last active: Oct 31, 2013
3 msgs
Yla Savh Issue with experimental design? Oct 12, 2013 Yla Savh Issue with experimental design? Oct 14, 2013 Yla Savh How to compute a correlation between two time ranges? Oct 31, 2013

anord

Last active: Oct 28, 2013
1 msg
anord Problems with lme random slope+intercept model Oct 28, 2013

chris.brien at iinet.net.au

Last active: Oct 21, 2013
3 msgs
chris.brien at iinet.net.au mixed modelling with random effects with different correlation structures? GLMM/GEE mix Oct 1, 2013 chris.brien at iinet.net.au Error structure for split-split plot with treatment across blocks Oct 21, 2013 chris.brien at iinet.net.au Error structure for split-split plot with treatment across blocks Oct 21, 2013

iwhite@staffmail.ed.ac.uk

Last active: Oct 26, 2013
1 msg
iwhite@staffmail.ed.ac.uk lme: predictions variance collapses when one more level is added Oct 26, 2013

john benson

Last active: Oct 22, 2013
1 msg
john benson MCMCglmm 3 way interaction Oct 22, 2013

lbp

Last active: Oct 15, 2013
1 msg
lbp how to get confidence intervals in using glmer in lme4 package? Oct 15, 2013

marKo

Last active: Oct 25, 2013
1 msg
marKo multilevel linear models Oct 25, 2013

saba

Last active: Oct 24, 2013
1 msg
saba GAMM4: In mer_finalize(ans) : false convergence (8) Oct 24, 2013

srecko joksimovic

Last active: Oct 22, 2013
1 msg
srecko joksimovic multilevel linear models Oct 22, 2013

xavier chevillot

Last active: Oct 21, 2013
2 msgs
xavier chevillot Help with Delta-gamma Glmm Oct 10, 2013 xavier chevillot select glmm r function Oct 21, 2013