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R-SIG-mixed-models November 2013

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simulate.lme for correlation in repeated measure
2 msgs
bbonit at tin.it simulate.lme for correlation in repeated measure Nov 28, 2013
Ben Bolker simulate.lme for correlation in repeated measure Nov 29, 2013
estimation of intercept in binomial glmer
1 msg
Björn Lindström estimation of intercept in binomial glmer Nov 29, 2013
Predict method for lmer
1 msg
Nathan E. Rutenbeck Predict method for lmer Nov 29, 2013
Multilevel logit and sample size (mixed models)
1 msg
Linus Holtermann Multilevel logit and sample size (mixed models) Nov 28, 2013
Predict method for lmer
2 msgs
Nathan E. Rutenbeck Predict method for lmer Nov 25, 2013
Ben Bolker Predict method for lmer Nov 27, 2013
Using mcp and glht for lmer model
1 msg
Vanlangendonck, F. (Flora) Using mcp and glht for lmer model Nov 27, 2013
"invalid class “mer” object" error with lme4 0.999375.42
2 msgs
Rachel Smith "invalid class “mer” object" error with lme4 0.999375.42 Nov 23, 2013
Ben Bolker "invalid class “mer” object" error with lme4 0.999375.42 Nov 26, 2013
lmer model design
2 msgs
Benedetta Cesqui lmer model design Nov 26, 2013
Benedetta Cesqui R: lmer model design Nov 26, 2013
function for simulating from GLMM
1 msg
Paul Johnson function for simulating from GLMM Nov 26, 2013
HELP gls
1 msg
bbonit at tin.it HELP gls Nov 26, 2013
lmer specification for random effects: contradictory reults
3 msgs
ONKELINX, Thierry lmer specification for random effects: contradictory reults Nov 25, 2013
Benedetta Cesqui R: [R] lmer specification for random effects: contradictory reults Nov 25, 2013
ONKELINX, Thierry lmer specification for random effects: contradictory reults Nov 26, 2013
Fitting linear mixed model to longitudinal data with very few data points
7 msgs
David Westergaard Fitting linear mixed model to longitudinal data with very few data points Nov 23, 2013
Steven J. Pierce Fitting linear mixed model to longitudinal data with very few data points Nov 24, 2013
David Westergaard Fitting linear mixed model to longitudinal data with very few data points Nov 24, 2013
Steven J. Pierce Fitting linear mixed model to longitudinal data with very few data points Nov 24, 2013
Ben Bolker Fitting linear mixed model to longitudinal data with very few data points Nov 24, 2013
David Westergaard Fitting linear mixed model to longitudinal data with very few data points Nov 25, 2013
Ben Bolker Fitting linear mixed model to longitudinal data with very few data points Nov 25, 2013
nlme repeated measures
2 msgs
Elizabeth Webb nlme repeated measures Nov 25, 2013
Ben Bolker nlme repeated measures Nov 25, 2013
more worked GLMM examples
1 msg
Ben Bolker more worked GLMM examples Nov 25, 2013
Contradictory results in lmer
1 msg
Benedetta Cesqui Contradictory results in lmer Nov 25, 2013
specifying partially crossed mixed effects
1 msg
Pradeep Babu S. specifying partially crossed mixed effects Nov 24, 2013
Post-hoc comparison for incorrect responses in glmer
2 msgs
Francesco Post-hoc comparison for incorrect responses in glmer Nov 23, 2013
Francesco Post-hoc comparison for incorrect responses in glmer Nov 23, 2013
Testing Random Effects--On the Boundary
5 msgs
AvianResearchDivision Testing Random Effects--On the Boundary Nov 21, 2013
Thompson,Paul Testing Random Effects--On the Boundary Nov 21, 2013
Ben Bolker Testing Random Effects--On the Boundary Nov 21, 2013
James Grecian Testing Random Effects--On the Boundary Nov 22, 2013
AvianResearchDivision Testing Random Effects--On the Boundary Nov 22, 2013
Post-hoc comparison for incorrect responses in glmer
1 msg
Francesco Post-hoc comparison for incorrect responses in glmer Nov 22, 2013
Testing Random Effects--On the Boundary
3 msgs
AvianResearchDivision Testing Random Effects--On the Boundary Nov 21, 2013
Ben Bolker Testing Random Effects--On the Boundary Nov 21, 2013
Geraci, Marco Testing Random Effects--On the Boundary Nov 22, 2013
JOBS: 5 New Academic Posts in Quantitative Social Science at the University of Bristol
1 msg
Malcolm Fairbrother JOBS: 5 New Academic Posts in Quantitative Social Science at the University of Bristol Nov 21, 2013
Define prior in MCMCglmm
12 msgs
Szymek Drobniak Define prior in MCMCglmm Nov 13, 2013
Maria Paola Bissiri Define prior in MCMCglmm Nov 14, 2013
Jarrod Hadfield Define prior in MCMCglmm Nov 14, 2013
Szymek Drobniak Define prior in MCMCglmm Nov 15, 2013
Jake Westfall reference for standard error of estimated variance components Nov 15, 2013
John Maindonald reference for standard error of estimated variance components Nov 15, 2013
Ben Bolker reference for standard error of estimated variance components Nov 15, 2013
Jarrod Hadfield Define prior in MCMCglmm Nov 15, 2013
Maria Paola Bissiri Define prior in MCMCglmm Nov 20, 2013
Szymek Drobniak Define prior in MCMCglmm Nov 20, 2013
Maria Paola Bissiri Define prior in MCMCglmm Nov 21, 2013
Szymek Drobniak Define prior in MCMCglmm Nov 21, 2013
lme4: constrain sigma to 0
1 msg
Ben Bolker lme4: constrain sigma to 0 Nov 21, 2013
Course: Introduction to Linear mixed effects models, GLMM and MCMC with R
1 msg
Highland Statistics Ltd Course: Introduction to Linear mixed effects models, GLMM and MCMC with R Nov 21, 2013
Calculate Repeatability of Mixed Model Random Effects
1 msg
AvianResearchDivision Calculate Repeatability of Mixed Model Random Effects Nov 20, 2013
extract DFs from summary.merModLmerTest
3 msgs
Jake Westfall extract DFs from summary.merModLmerTest Nov 20, 2013
Ben Bolker extract DFs from summary.merModLmerTest Nov 20, 2013
Jake Westfall extract DFs from summary.merModLmerTest Nov 20, 2013
starter values
1 msg
Arndt Kunick starter values Nov 20, 2013
non-nested effects in lme
6 msgs
Andrea Onofri non-nested effects in lme Nov 19, 2013
Friso Muijsers non-nested effects in lme Nov 19, 2013
Andrea Onofri non-nested effects in lme Nov 19, 2013
Friso Muijsers non-nested effects in lme Nov 19, 2013
Andrzej Galecki non-nested effects in lme Nov 19, 2013
Andrea Onofri non-nested effects in lme Nov 20, 2013
starter values
3 msgs
Arndt Kunick starter values Nov 19, 2013
Arnold Reynaldi starter values Nov 19, 2013
Martin Maechler starter values Nov 19, 2013
Post-hoc comparison for incorrect responses in glmer
1 msg
Francesco Post-hoc comparison for incorrect responses in glmer Nov 19, 2013
Heteroscedasticity and d.f.
1 msg
Jasper Wubs Heteroscedasticity and d.f. Nov 18, 2013
Set individual variance components to zero in lme
1 msg
Gustaf Granath Set individual variance components to zero in lme Nov 18, 2013
Error with predict.merMod and random slopes
1 msg
Stefan Th. Gries Error with predict.merMod and random slopes Nov 17, 2013
Model comparison with anova and AIC: p=0 and different AIC-values
9 msgs
Stefan Th. Gries Model comparison with anova and AIC: p=0 and different AIC-values Nov 15, 2013
Ben Bolker Model comparison with anova and AIC: p=0 and different AIC-values Nov 16, 2013
Stefan Th. Gries Model comparison with anova and AIC: p=0 and different AIC-values Nov 16, 2013
Ben Bolker Model comparison with anova and AIC: p=0 and different AIC-values Nov 16, 2013
Stefan Th. Gries Model comparison with anova and AIC: p=0 and different AIC-values Nov 16, 2013
Ben Bolker Model comparison with anova and AIC: p=0 and different AIC-values Nov 16, 2013
Stefan Th. Gries Model comparison with anova and AIC: p=0 and different AIC-values Nov 16, 2013
Ben Bolker Model comparison with anova and AIC: p=0 and different AIC-values Nov 17, 2013
Stefan Th. Gries Model comparison with anova and AIC: p=0 and different AIC-values Nov 17, 2013
lognormal bias correction with nested random effects
1 msg
Elizabeth Webb lognormal bias correction with nested random effects Nov 16, 2013
MCMCglmm - Random effect prior specification
2 msgs
Tanya Pennell MCMCglmm - Random effect prior specification Nov 15, 2013
Jarrod Hadfield MCMCglmm - Random effect prior specification Nov 16, 2013
lmList from lme4 on grouped data objects
3 msgs
Viechtbauer Wolfgang (STAT) lmList from lme4 on grouped data objects Nov 12, 2013
Ben Bolker lmList from lme4 on grouped data objects Nov 13, 2013
Viechtbauer Wolfgang (STAT) lmList from lme4 on grouped data objects Nov 15, 2013
Plotting residuals for GLMER model and zero counts
2 msgs
Malcolm Fairbrother Plotting residuals for GLMER model and zero counts Nov 14, 2013
Ben Bolker Plotting residuals for GLMER model and zero counts Nov 14, 2013
Non linear mixed models on binomial distributed data
1 msg
Juan Santos Non linear mixed models on binomial distributed data Nov 14, 2013
Error with predict.merMod and random slopes
3 msgs
Nick Donnelly Error with predict.merMod and random slopes Nov 12, 2013
Ben Bolker Error with predict.merMod and random slopes Nov 12, 2013
Ben Bolker Error with predict.merMod and random slopes Nov 13, 2013
Looking for residuals in clmm summary output
3 msgs
aline.frank at wsl.ch Looking for residuals in clmm summary output Nov 12, 2013
Ben Bolker Looking for residuals in clmm summary output Nov 12, 2013
Rune Haubo Looking for residuals in clmm summary output Nov 13, 2013
Define prior in MCMCglmm
1 msg
Maria Paola Bissiri Define prior in MCMCglmm Nov 12, 2013
Interpreting Zero altered models in MCMCglmm
6 msgs
Hodsoll, John Interpreting Zero altered models in MCMCglmm Nov 7, 2013
Jarrod Hadfield Interpreting Zero altered models in MCMCglmm Nov 7, 2013
Jarrod Hadfield Interpreting Zero altered models in MCMCglmm Nov 8, 2013
David Atkins Interpreting Zero altered models in MCMCglmm Nov 8, 2013
Hodsoll, John Interpreting Zero altered models in MCMCglmm Nov 11, 2013
Hodsoll, John Interpreting Zero altered models in MCMCglmm Nov 12, 2013
Doubt about including random effects or not
3 msgs
V. Coudrain Doubt about including random effects or not Nov 11, 2013
Ben Bolker Doubt about including random effects or not Nov 11, 2013
V. Coudrain Doubt about including random effects or not Nov 12, 2013
Nonlinear mixed effect with nlme
1 msg
Arnold Reynaldi Nonlinear mixed effect with nlme Nov 11, 2013
adding a kinship matrix as a random covariate
2 msgs
Federico Calboli adding a kinship matrix as a random covariate Nov 11, 2013
Ben Bolker adding a kinship matrix as a random covariate Nov 11, 2013
p-value calculation in binomial models
2 msgs
Sarah Dryhurst p-value calculation in binomial models Nov 11, 2013
Sarah Dryhurst p-value calculation in binomial models Nov 11, 2013
Variances of higher-order vs. lower-order random terms
7 msgs
Jake Westfall Variances of higher-order vs. lower-order random terms Nov 8, 2013
Reinhold Kliegl Variances of higher-order vs. lower-order random terms Nov 8, 2013
Jake Westfall Variances of higher-order vs. lower-order random terms Nov 8, 2013
Peter Dalgaard Variances of higher-order vs. lower-order random terms Nov 9, 2013
Reinhold Kliegl Variances of higher-order vs. lower-order random terms Nov 9, 2013
Reinhold Kliegl Variances of higher-order vs. lower-order random terms Nov 9, 2013
Jake Westfall Variances of higher-order vs. lower-order random terms Nov 9, 2013
getME function crashes
6 msgs
Johannes Radinger getME function crashes Nov 7, 2013
Renaud Lancelot getME function crashes Nov 7, 2013
Steve Walker getME function crashes Nov 7, 2013
Hugo.Mildenberger at web.de getME function crashes Nov 7, 2013
Ben Bolker getME function crashes Nov 7, 2013
Johannes Radinger getME function crashes Nov 8, 2013
the cox-reid adjusted likelihood for linear mixed models in R
1 msg
Youngjo Lee the cox-reid adjusted likelihood for linear mixed models in R Nov 6, 2013
Plotting residuals for GLMER model and zero counts
2 msgs
Francesco Plotting residuals for GLMER model and zero counts Nov 5, 2013
Ben Bolker Plotting residuals for GLMER model and zero counts Nov 6, 2013
cox reid likelihood in R
3 msgs
Akshita Chawla cox reid likelihood in R Nov 6, 2013
Akshita Chawla cox reid likelihood in R Nov 6, 2013
Ben Bolker cox reid likelihood in R Nov 6, 2013
contrasts and interactions with multi-level factors in glmer
1 msg
Ben Bolker contrasts and interactions with multi-level factors in glmer Nov 5, 2013
KRmodcomp issues
2 msgs
Kevin Gould KRmodcomp issues Nov 4, 2013
Henrik Singmann KRmodcomp issues Nov 5, 2013
Manipulating matrices from MCMCglmm
3 msgs
Adam Hayward Manipulating matrices from MCMCglmm Nov 1, 2013
Jarrod Hadfield Manipulating matrices from MCMCglmm Nov 1, 2013
Adam Hayward Manipulating matrices from MCMCglmm Nov 1, 2013
What does "number of groups < 50"
1 msg
Maria Paola Bissiri What does "number of groups < 50" Nov 1, 2013
ICC on random slopes in mixed logistic regression
2 msgs