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R-SIG-mixed-models February 2014

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likelihood-ratio tests in conflict with coefficiants in maximal random effect model
6 msgs
Emilia Ellsiepen likelihood-ratio tests in conflict with coefficiants in maximal random effect model Feb 28, 2014
Douglas Bates likelihood-ratio tests in conflict with coefficiants in maximal random effect model Feb 28, 2014
Ben Bolker likelihood-ratio tests in conflict with coefficiants in maximal random effect model Feb 28, 2014
Roger Levy likelihood-ratio tests in conflict with coefficiants in maximal random effect model Feb 28, 2014
Douglas Bates likelihood-ratio tests in conflict with coefficiants in maximal random effect model Feb 28, 2014
Roger Levy likelihood-ratio tests in conflict with coefficiants in maximal random effect model Feb 28, 2014
nlmer self starting function
2 msgs
Daniel Hocking nlmer self starting function Feb 25, 2014
Ben Bolker nlmer self starting function Feb 28, 2014
glmmADMB (mixed binomal random effects)
1 msg
Ben Bolker glmmADMB (mixed binomal random effects) Feb 28, 2014
Creation of a dummy variable with Lme4
1 msg
Ben Bolker Creation of a dummy variable with Lme4 Feb 28, 2014
Error in sprintf
4 msgs
Alexej Siren Error in sprintf Feb 25, 2014
Ben Bolker Error in sprintf Feb 26, 2014
Ben Bolker Error in sprintf Feb 26, 2014
Alexej Siren Error in sprintf Feb 27, 2014
prediction from glmer.nb
1 msg
Thomas Lee Anderson prediction from glmer.nb Feb 27, 2014
Problems installing lme4 1.0-6 (won't compile due to Rcpp not compiling)
2 msgs
Austin, Peter Problems installing lme4 1.0-6 (won't compile due to Rcpp not compiling) Feb 24, 2014
Ben Bolker Problems installing lme4 1.0-6 (won't compile due to Rcpp not compiling) Feb 26, 2014
confint.merMod(): method = "boot" throws error
2 msgs
Bertolt Meyer confint.merMod(): method = "boot" throws error Feb 26, 2014
Ben Bolker confint.merMod(): method = "boot" throws error Feb 26, 2014
Order in which variance components are reported
4 msgs
Asaf Weinstein Order in which variance components are reported Feb 19, 2014
Ben Bolker Order in which variance components are reported Feb 22, 2014
Douglas Bates Order in which variance components are reported Feb 22, 2014
Asaf Weinstein Order in which variance components are reported Feb 26, 2014
Model is nearly unidentifiable with glmer
7 msgs
Ramon Diaz-Uriarte Model is nearly unidentifiable with glmer Feb 19, 2014
Ramon Diaz-Uriarte Model is nearly unidentifiable with glmer Feb 24, 2014
Martin Maechler Model is nearly unidentifiable with glmer Feb 24, 2014
Ramon Diaz-Uriarte Model is nearly unidentifiable with glmer Feb 24, 2014
Ramon Diaz-Uriarte Model is nearly unidentifiable with glmer Feb 25, 2014
David Duffy Model is nearly unidentifiable with glmer Feb 25, 2014
Ramon Diaz-Uriarte Model is nearly unidentifiable with glmer Feb 26, 2014
Error in sprintf
1 msg
Alexej Siren Error in sprintf Feb 25, 2014
error using predict() with lmer
1 msg
Ben Bolker error using predict() with lmer Feb 25, 2014
Characterizing correlation between binomial intercepts
7 msgs
Michael Lawrence Characterizing correlation between binomial intercepts Feb 25, 2014
Jake Westfall Characterizing correlation between binomial intercepts Feb 25, 2014
Michael Lawrence Characterizing correlation between binomial intercepts Feb 25, 2014
Jake Westfall Characterizing correlation between binomial intercepts Feb 25, 2014
Joshua Wiley Characterizing correlation between binomial intercepts Feb 25, 2014
Michael Lawrence Characterizing correlation between binomial intercepts Feb 25, 2014
Jake Westfall Characterizing correlation between binomial intercepts Feb 25, 2014
Specifying fixed residual variances for multilevel models
3 msgs
Zaslavsky, Alan M. Specifying fixed residual variances for multilevel models Feb 22, 2014
Vincent Dorie Specifying fixed residual variances for multilevel models Feb 24, 2014
Viechtbauer Wolfgang (STAT) Specifying fixed residual variances for multilevel models Feb 25, 2014
Help with analyzing multivariate outcomes
1 msg
marKo Help with analyzing multivariate outcomes Feb 25, 2014
spatial GLMMs
2 msgs
Ben Bolker spatial GLMMs Feb 24, 2014
Kevin Wright spatial GLMMs Feb 24, 2014
GLMM R package
1 msg
Ben Bolker GLMM R package Feb 23, 2014
glmer function in lme4 - false convergence warning message, (Austin, Peter)
1 msg
Highland Statistics Ltd glmer function in lme4 - false convergence warning message, (Austin, Peter) Feb 23, 2014
lme4 problem solved by updating Rcpp
2 msgs
Hugo Quené lme4 problem solved by updating Rcpp Feb 20, 2014
Ben Bolker lme4 problem solved by updating Rcpp Feb 22, 2014
Help: Split-Split model nested in a nested structure
2 msgs
Zia Ahmed Help: Split-Split model nested in a nested structure Feb 22, 2014
iwhite@staffmail.ed.ac.uk Help: Split-Split model nested in a nested structure Feb 22, 2014
glmer function in lme4 - false convergence warning message
1 msg
Austin, Peter glmer function in lme4 - false convergence warning message Feb 22, 2014
Split-Split model in nested structure
1 msg
Zia Ahmed Split-Split model in nested structure Feb 22, 2014
Help: Split-Split model nested in a nested structure
1 msg
Zia Ahmed Help: Split-Split model nested in a nested structure Feb 21, 2014
glmer function in lme4 package
1 msg
Douglas Bates glmer function in lme4 package Feb 21, 2014
Variance Inflation Factors
2 msgs
Nick Isaac Variance Inflation Factors Feb 21, 2014
John Fox Variance Inflation Factors Feb 21, 2014
Help with analyzing multivariate outcomes
1 msg
marKo Help with analyzing multivariate outcomes Feb 21, 2014
Help with analyzing multivariate outcomes
1 msg
marKo Help with analyzing multivariate outcomes Feb 21, 2014
order of models when using anova
5 msgs
Juliet Hannah order of models when using anova Feb 20, 2014
Steve Taylor order of models when using anova Feb 20, 2014
Rolf Turner order of models when using anova Feb 20, 2014
Juliet Hannah order of models when using anova Feb 20, 2014
Rolf Turner order of models when using anova Feb 20, 2014
How do you do?
1 msg
Tina Wey How do you do? Feb 19, 2014
Pedigreemm on lme4-1.0
4 msgs
Ben Bolker Pedigreemm on lme4-1.0 Feb 18, 2014
David Duffy Pedigreemm on lme4-1.0 Feb 18, 2014
Ben Bolker Pedigreemm on lme4-1.0 Feb 19, 2014
David Duffy Pedigreemm on lme4-1.0 Feb 19, 2014
R2 of a linear mixed model in the "nlme" package
3 msgs
Douglas Bates R2 of a linear mixed model in the "nlme" package Feb 18, 2014
Nick Isaac R2 of a linear mixed model in the "nlme" package Feb 18, 2014
Friso Muijsers R2 of a linear mixed model in the "nlme" package Feb 19, 2014
Variance Inflation Factors
2 msgs
Nick Isaac Variance Inflation Factors Feb 18, 2014
Nick Isaac Variance Inflation Factors Feb 18, 2014
lmer estimates account for random effect?
1 msg
Daniel Cher lmer estimates account for random effect? Feb 18, 2014
MCMCglmm model for heteroskedasticity at level one
2 msgs
Maxim Kovalenko MCMCglmm model for heteroskedasticity at level one Feb 18, 2014
Jarrod Hadfield MCMCglmm model for heteroskedasticity at level one Feb 18, 2014
mixed effect model question
1 msg
Thijs vanden Bergh mixed effect model question Feb 18, 2014
Modelling heterogeneous variances for an interaction term in MCMCglmm?
8 msgs
Jackie Wood Modelling heterogeneous variances for an interaction term in MCMCglmm? Feb 12, 2014
Jarrod Hadfield Modelling heterogeneous variances for an interaction term in MCMCglmm? Feb 13, 2014
Jackie Wood Modelling heterogeneous variances for an interaction term in MCMCglmm? Feb 13, 2014
Jarrod Hadfield Modelling heterogeneous variances for an interaction term in MCMCglmm? Feb 13, 2014
Jackie Wood Modelling heterogeneous variances for an interaction term in MCMCglmm? Feb 13, 2014
Jarrod Hadfield Modelling heterogeneous variances for an interaction term in MCMCglmm? Feb 13, 2014
Jackie Wood Modelling heterogeneous variances for an interaction term in MCMCglmm? Feb 18, 2014
Jarrod Hadfield Modelling heterogeneous variances for an interaction term in MCMCglmm? Feb 18, 2014
Huber-White standard errors for glmer Poisson fits
4 msgs
Theodore Lytras Huber-White standard errors for glmer Poisson fits Feb 17, 2014
Ben Bolker Huber-White standard errors for glmer Poisson fits Feb 17, 2014
Steve Walker Huber-White standard errors for glmer Poisson fits Feb 17, 2014
Theodore Lytras Huber-White standard errors for glmer Poisson fits Feb 17, 2014
Pedigreemm on lme4-1.0
4 msgs
Joehanes, Roby (NIH/NHLBI) [F] Pedigreemm on lme4-1.0 Feb 14, 2014
Ben Bolker Pedigreemm on lme4-1.0 Feb 14, 2014
Joehanes, Roby (NIH/NHLBI) [F] Pedigreemm on lme4-1.0 Feb 14, 2014
Ben Bolker Pedigreemm on lme4-1.0 Feb 14, 2014
MCMCglmm and massing records in relation to ainv
2 msgs
Szymek Drobniak MCMCglmm and massing records in relation to ainv Feb 13, 2014
Jarrod Hadfield MCMCglmm and massing records in relation to ainv Feb 14, 2014
issue with glmer() with the newest updated lme4 version
1 msg
Ben Bolker issue with glmer() with the newest updated lme4 version Feb 14, 2014
new version of lme4 - Log-Likelihood of model returned as "-Inf"
1 msg
Ben Bolker new version of lme4 - Log-Likelihood of model returned as "-Inf" Feb 13, 2014
lme4: constrain sigma to 0
14 msgs
Asaf Weinstein lme4: constrain sigma to 0 Feb 11, 2014
Rolf Turner lme4: constrain sigma to 0 Feb 11, 2014
Rolf Turner lme4: constrain sigma to 0 Feb 11, 2014
Vincent Dorie lme4: constrain sigma to 0 Feb 11, 2014
Jake Westfall lme4: constrain sigma to 0 Feb 11, 2014
Stuart Luppescu lme4: constrain sigma to 0 Feb 11, 2014
Rolf Turner lme4: constrain sigma to 0 Feb 12, 2014
Viechtbauer Wolfgang (STAT) lme4: constrain sigma to 0 Feb 13, 2014
Rolf Turner lme4: constrain sigma to 0 Feb 13, 2014
Rolf Turner lme4: constrain sigma to 0 Feb 13, 2014
Asaf Weinstein lme4: constrain sigma to 0 Feb 13, 2014
Vincent Dorie lme4: constrain sigma to 0 Feb 13, 2014
Vincent Dorie lme4: constrain sigma to 0 Feb 13, 2014
Vincent Dorie lme4: constrain sigma to 0 Feb 13, 2014
Unable to install glmmadmb
2 msgs
Emma Stone Unable to install glmmadmb Feb 13, 2014
Ben Bolker Unable to install glmmadmb Feb 13, 2014
new version of lme4 - Log-Likelihood of model returned as "-Inf"
4 msgs
juwb08 at hampshire.edu new version of lme4 - Log-Likelihood of model returned as "-Inf" Feb 12, 2014
juwb08 at hampshire.edu new version of lme4 - Log-Likelihood of model returned as "-Inf" Feb 12, 2014
Ben Bolker new version of lme4 - Log-Likelihood of model returned as "-Inf" Feb 12, 2014
Ben Bolker new version of lme4 - Log-Likelihood of model returned as "-Inf" Feb 12, 2014
lme4: constrain sigma to 0 [SEC=Unclassified]
4 msgs
Steve Candy lme4: constrain sigma to 0 [SEC=Unclassified] Feb 11, 2014
David Duffy lme4: constrain sigma to 0 [SEC=Unclassified] Feb 12, 2014
Vincent Dorie lme4: constrain sigma to 0 Feb 12, 2014
Viechtbauer Wolfgang (STAT) lme4: constrain sigma to 0 Feb 12, 2014
Multivariate multilevel analysis with nlme
1 msg
Corentin Gonthier Multivariate multilevel analysis with nlme Feb 12, 2014
Converging mixed models with large number of random coefficients
2 msgs
Thomas Schroder Converging mixed models with large number of random coefficients Feb 10, 2014
Hans Ekbrand Converging mixed models with large number of random coefficients Feb 11, 2014
R: random structure in lmer
1 msg
Ben Bolker R: random structure in lmer Feb 11, 2014
random structure in lmer
2 msgs
Cerni, Tania random structure in lmer Feb 11, 2014
Ben Bolker random structure in lmer Feb 11, 2014
pedigreemm number of levels per grouping factor
4 msgs
David Duffy pedigreemm number of levels per grouping factor Feb 8, 2014
Ben Bolker pedigreemm number of levels per grouping factor Feb 9, 2014
David Duffy pedigreemm number of levels per grouping factor Feb 9, 2014
Wilson, Alastair pedigreemm number of levels per grouping factor Feb 11, 2014
installing lme4.0 on OS X 10.9
4 msgs
Cole, Tim installing lme4.0 on OS X 10.9 Feb 10, 2014
Simon Urbanek installing lme4.0 on OS X 10.9 Feb 10, 2014
Roger Levy installing lme4.0 on OS X 10.9 Feb 10, 2014
Simon Urbanek installing lme4.0 on OS X 10.9 Feb 10, 2014
random slope model overinflate CIs (Greg Guerin)
1 msg
Juan Santos random slope model overinflate CIs (Greg Guerin) Feb 10, 2014
installing lme4.0 on OS X 10.9
5 msgs
Roger Levy installing lme4.0 on OS X 10.9 Feb 7, 2014
Tobias Heed installing lme4.0 on OS X 10.9 Feb 7, 2014
Roger Levy installing lme4.0 on OS X 10.9 Feb 9, 2014
Hugo.Mildenberger at web.de installing lme4.0 on OS X 10.9 Feb 9, 2014
Tobias Heed installing lme4.0 on OS X 10.9 Feb 10, 2014
random slope model overinflate CI?s
1 msg
Greg Guerin random slope model overinflate CI?s Feb 9, 2014
Slight differences in fitted coefficients in lme4_1.0-6 compared to lme4_0.999999-2
8 msgs
Tom Wenseleers Slight differences in fitted coefficients in lme4_1.0-6 compared to lme4_0.999999-2 Feb 7, 2014
Ben Bolker Slight differences in fitted coefficients in lme4_1.0-6 compared to lme4_0.999999-2 Feb 7, 2014
Jake Westfall Slight differences in fitted coefficients in lme4_1.0-6 compared to lme4_0.999999-2 Feb 7, 2014
Tom Wenseleers Slight differences in fitted coefficients in lme4_1.0-6 compared to lme4_0.999999-2 Feb 7, 2014
Steve Walker Slight differences in fitted coefficients in lme4_1.0-6 compared to lme4_0.999999-2 Feb 7, 2014
Tom Wenseleers Slight differences in fitted coefficients in lme4_1.0-6 compared to lme4_0.999999-2 Feb 7, 2014
Ulf Köther Slight differences in fitted coefficients in lme4_1.0-6 compared to lme4_0.999999-2 Feb 7, 2014
Ben Bolker Slight differences in fitted coefficients in lme4_1.0-6 compared to lme4_0.999999-2 Feb 7, 2014
random slope model overinflate CI´s
1 msg
Juan Santos random slope model overinflate CI´s Feb 7, 2014
Checking overdispersion in binomial mixed model
3 msgs
Tom Wenseleers Checking overdispersion in binomial mixed model Feb 7, 2014
S Ellison Checking overdispersion in binomial mixed model Feb 7, 2014
Tom Wenseleers Checking overdispersion in binomial mixed model Feb 7, 2014
MuMin package - use of AICc or QAICc?
1 msg
Alexa Varah MuMin package - use of AICc or QAICc? Feb 7, 2014
bug/problem with update for merMod
3 msgs
Alexandra Kuznetsova bug/problem with update for merMod Feb 7, 2014
Ben Bolker bug/problem with update for merMod Feb 7, 2014
Ben Bolker bug/problem with update for merMod Feb 7, 2014
Differences in autocorrelation between GLS and LME?
1 msg
Yla Savh Differences in autocorrelation between GLS and LME? Feb 6, 2014
help with pdDiag and nlme
1 msg
Anne Hoen help with pdDiag and nlme Feb 6, 2014
predictions from MCMCglmm multinomial model
1 msg
Jarrod Hadfield predictions from MCMCglmm multinomial model Feb 6, 2014
Need help with MCMCglmm
1 msg
Jarrod Hadfield Need help with MCMCglmm Feb 6, 2014
pedigreemm number of levels per grouping factor
3 msgs
Wilson, Alastair pedigreemm number of levels per grouping factor Feb 4, 2014
Ben Bolker pedigreemm number of levels per grouping factor Feb 5, 2014
Wilson, Alastair pedigreemm number of levels per grouping factor Feb 6, 2014
Multiresponse MCMCglmm model specification and questions
1 msg
Jarrod Hadfield Multiresponse MCMCglmm model specification and questions Feb 6, 2014
MCMCglmm model for heteroskedasticity at level one
1 msg
Jarrod Hadfield MCMCglmm model for heteroskedasticity at level one Feb 6, 2014
Specify prior for sir-function and starting values in the MCMCglmm packages?
1 msg
Jarrod Hadfield Specify prior for sir-function and starting values in the MCMCglmm packages? Feb 6, 2014
model specification for 2x2x2 factorial between-subjects design with repeated measures
2 msgs
Cole, Tim model specification for 2x2x2 factorial between-subjects design with repeated measures Feb 5, 2014
Jake Westfall model specification for 2x2x2 factorial between-subjects design with repeated measures Feb 5, 2014
model specification for 2x2x2 factorial between-subjects design with repeated measures
1 msg
Stephen Politzer-Ahles model specification for 2x2x2 factorial between-subjects design with repeated measures Feb 5, 2014
prunePed in MCMCglmm
2 msgs
Adam Hayward prunePed in MCMCglmm Feb 4, 2014
David Duffy prunePed in MCMCglmm Feb 4, 2014
Recreating tree allometry model comparisons (Banin et al. 2012)
1 msg
Koen Hufkens Recreating tree allometry model comparisons (Banin et al. 2012) Feb 4, 2014
model specification for 2x2x2 factorial between-subjects design with repeated measures
1 msg
Bruce Gilstrap model specification for 2x2x2 factorial between-subjects design with repeated measures Feb 4, 2014
Recreating tree allometry model comparisons (Banin et al. 2012)
1 msg
Koen Hufkens Recreating tree allometry model comparisons (Banin et al. 2012) Feb 3, 2014
interpretation of predict plot (glmer)
2 msgs
Ben Bolker interpretation of predict plot (glmer) Feb 2, 2014
Barbara horta e costa interpretation of predict plot (glmer) Feb 3, 2014
Combining two sets of subplots obtained with different protocols
1 msg
Diaci, Jurij Combining two sets of subplots obtained with different protocols Feb 2, 2014
Combining two sets of subplots obtained with different protocols
2 msgs
Diaci, Jurij Combining two sets of subplots obtained with different protocols Feb 2, 2014
Baldwin, Jim -FS Combining two sets of subplots obtained with different protocols Feb 2, 2014
Maximal random-effects lmer not converging
1 msg
Stephen Politzer-Ahles Maximal random-effects lmer not converging Feb 2, 2014
random slopes versus nested random intercepts
2 msgs
Henrik Singmann random slopes versus nested random intercepts Feb 1, 2014
Jake Westfall random slopes versus nested random intercepts Feb 1, 2014
Simple: don't understand lmer formula and slopes
1 msg
Viechtbauer Wolfgang (STAT) Simple: don't understand lmer formula and slopes Feb 1, 2014
Simple: don't understand lmer formula and slopes
1 msg