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R-SIG-mixed-models July 2014

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Goodness of fit test for GLMM
1 msg
Goodness of fit test for GLMM
1 msg
yuki fujita Goodness of fit test for GLMM Jul 31, 2014
Testing goodness of fit for GLMM model
1 msg
Yuki Fujita Testing goodness of fit for GLMM model Jul 31, 2014
Calculating upper and lower confidence limits on a population estimate derived from multiple point estimates
2 msgs
Lenth, Russell V Calculating upper and lower confidence limits on a population estimate derived from multiple point estimates Jul 30, 2014
Reuben Smit Calculating upper and lower confidence limits on a population estimate derived from multiple point estimates Jul 31, 2014
Random effect on only one of the response variables in bivariate LMM (MCMCglmm)
3 msgs
Nicolas Rode Random effect on only one of the response variables in bivariate LMM (MCMCglmm) Jul 30, 2014
Nicolas Rode Random effect on only one of the response variables in bivariate LMM (MCMCglmm) Jul 30, 2014
Jarrod Hadfield Random effect on only one of the response variables in bivariate LMM (MCMCglmm) Jul 31, 2014
Pseudoreplication in a factorial GLM with a proportional response variable and categorical predictor variables
2 msgs
Berin Mackenzie Pseudoreplication in a factorial GLM with a proportional response variable and categorical predictor variables Jul 29, 2014
Lionel Pseudoreplication in a factorial GLM with a proportional response variable and categorical predictor variables Jul 30, 2014
Calculating upper and lower confidence limits on a population estimate derived from multiple point estimates
5 msgs
Reuben Smit Calculating upper and lower confidence limits on a population estimate derived from multiple point estimates Jul 28, 2014
Jeff Newmiller Calculating upper and lower confidence limits on a population estimate derived from multiple point estimates Jul 28, 2014
Farrar, David Calculating upper and lower confidence limits on a population estimate derived from multiple point estimates Jul 29, 2014
Baldwin, Jim -FS Calculating upper and lower confidence limits on a population estimate derived from multiple point estimates Jul 29, 2014
Reuben Smit Calculating upper and lower confidence limits on a population estimate derived from multiple point estimates Jul 30, 2014
lme4.0 vs. lme4 version 1.1-7: newer version returns inflated SE using glmer() with bobyqa optimizer
3 msgs
Chiara Gambi lme4.0 vs. lme4 version 1.1-7: newer version returns inflated SE using glmer() with bobyqa optimizer Jul 30, 2014
Ben Bolker lme4.0 vs. lme4 version 1.1-7: newer version returns inflated SE using glmer() with bobyqa optimizer Jul 30, 2014
Chiara Gambi lme4.0 vs. lme4 version 1.1-7: newer version returns inflated SE using glmer() with bobyqa optimizer Jul 30, 2014
lme and lmer
4 msgs
Nicholas Burgoyne lme and lmer Jul 30, 2014
Viechtbauer Wolfgang (STAT) lme and lmer Jul 30, 2014
Nicholas Burgoyne lme and lmer Jul 30, 2014
S Ellison lme and lmer Jul 30, 2014
MCMCglmm predict function output and interpretation
7 msgs
Justine Smith MCMCglmm predict function output and interpretation Jul 27, 2014
Jarrod Hadfield MCMCglmm predict function output and interpretation Jul 28, 2014
Justine MCMCglmm predict function output and interpretation Jul 28, 2014
Jarrod Hadfield MCMCglmm predict function output and interpretation Jul 29, 2014
Justine Smith MCMCglmm predict function output and interpretation Jul 29, 2014
Jarrod Hadfield MCMCglmm predict function output and interpretation Jul 29, 2014
Justine Smith MCMCglmm predict function output and interpretation Jul 29, 2014
Looking for an effect of relatedness in non-normal data (MCMCglmm)
2 msgs
Megan Bartlett Looking for an effect of relatedness in non-normal data (MCMCglmm) Jul 27, 2014
Jarrod Hadfield Looking for an effect of relatedness in non-normal data (MCMCglmm) Jul 28, 2014
Mixed effect models for a study with no (real) replication
1 msg
Marco Plebani Mixed effect models for a study with no (real) replication Jul 28, 2014
How to check if the interaction term is significant?
2 msgs
geetha venkatesh How to check if the interaction term is significant? Jul 27, 2014
Ben Bolker How to check if the interaction term is significant? Jul 27, 2014
MCMCglmm prior specification
2 msgs
Tanya Pennell MCMCglmm prior specification Jul 23, 2014
Jarrod Hadfield MCMCglmm prior specification Jul 26, 2014
Cbind and taxa rows trouble in MCMCglmm
2 msgs
Nick Clark Cbind and taxa rows trouble in MCMCglmm Jul 25, 2014
Jarrod Hadfield Cbind and taxa rows trouble in MCMCglmm Jul 26, 2014
longitudinal analysis covariance or mixed model approach
1 msg
espesser longitudinal analysis covariance or mixed model approach Jul 25, 2014
Install flexlambda- and master-lme4 from Github
1 msg
Christian Brauner Install flexlambda- and master-lme4 from Github Jul 25, 2014
MCMCglmm question: multivariate model
1 msg
Martina Carrete MCMCglmm question: multivariate model Jul 24, 2014
Install flexlambda- and master-lme4 from Github
3 msgs
Christian Brauner Install flexlambda- and master-lme4 from Github Jul 23, 2014
Ben Bolker Install flexlambda- and master-lme4 from Github Jul 23, 2014
Tobias Heed Install flexlambda- and master-lme4 from Github Jul 23, 2014
Mixed-effects Model - LMER - Plot of estimated Mean and CI
2 msgs
Lenth, Russell V Mixed-effects Model - LMER - Plot of estimated Mean and CI Jul 23, 2014
Lenth, Russell V Mixed-effects Model - LMER - Plot of estimated Mean and CI Jul 23, 2014
glmer z values binomial data
2 msgs
Clelia Gasparini glmer z values binomial data Jul 23, 2014
Ben Bolker glmer z values binomial data Jul 23, 2014
Providing starting values for glmer()
2 msgs
Ben Bolker Providing starting values for glmer() Jul 23, 2014
Ravi Varadhan Providing starting values for glmer() Jul 23, 2014
Mixed-effects Model - LMER - Plot of estimated Mean and CI
1 msg
Ofer Agai Mixed-effects Model - LMER - Plot of estimated Mean and CI Jul 23, 2014
Error in Profile likelihood based confidence intervals in glmer()
2 msgs
Ravi Varadhan Error in Profile likelihood based confidence intervals in glmer() Jul 22, 2014
Ben Bolker Error in Profile likelihood based confidence intervals in glmer() Jul 22, 2014
Mixed effect models for a study with no (real) replication
2 msgs
Marco Plebani Mixed effect models for a study with no (real) replication Jul 22, 2014
ONKELINX, Thierry Mixed effect models for a study with no (real) replication Jul 22, 2014
Question on semiparametric bootstrap in lme4
2 msgs
Mark Lai Question on semiparametric bootstrap in lme4 Jul 21, 2014
Ben Bolker Question on semiparametric bootstrap in lme4 Jul 22, 2014
LMM: including ranef or not?
3 msgs
Anna-Marie Corman LMM: including ranef or not? Jul 21, 2014
Ben Bolker LMM: including ranef or not? Jul 21, 2014
Anna-Marie Corman LMM: including ranef or not? Jul 21, 2014
question about lme4
2 msgs
Ben Bolker question about lme4 Jul 18, 2014
Leithen question about lme4 Jul 21, 2014
lmer Control Parameters Question
2 msgs
Douglas Bates lmer Control Parameters Question Jul 21, 2014
David Duffy lmer Control Parameters Question Jul 21, 2014
LMM: including ranef or not?
1 msg
Anna-Marie Corman LMM: including ranef or not? Jul 21, 2014
glmmADMB package
2 msgs
Rajibul Mian glmmADMB package Jul 15, 2014
Ben Bolker glmmADMB package Jul 19, 2014
How is the covariance factor computed?
8 msgs
Christian Brauner How is the covariance factor computed? Jul 17, 2014
Vincent Dorie How is the covariance factor computed? Jul 17, 2014
Ben Bolker How is the covariance factor computed? Jul 17, 2014
Vincent Dorie How is the covariance factor computed? Jul 17, 2014
steve.walker at utoronto.ca How is the covariance factor computed? Jul 17, 2014
Christian Brauner How is the covariance factor computed? Jul 18, 2014
Ben Bolker How is the covariance factor computed? Jul 18, 2014
Christian Brauner How is the covariance factor computed? Jul 19, 2014
Checking modeling assumptions in a binomial GLMM
3 msgs
Ben Bolker Checking modeling assumptions in a binomial GLMM Jul 17, 2014
Ravi Varadhan Checking modeling assumptions in a binomial GLMM Jul 17, 2014
Ben Bolker Checking modeling assumptions in a binomial GLMM Jul 17, 2014
Negative binomial in glmmadmb
1 msg
Ben Bolker Negative binomial in glmmadmb Jul 17, 2014
Accuracy of Va estimates using univariate versus multivariate animal model
2 msgs
Stephane Chantepie Accuracy of Va estimates using univariate versus multivariate animal model Jul 17, 2014
Jarrod Hadfield Accuracy of Va estimates using univariate versus multivariate animal model Jul 17, 2014
Same variable as both fixed and random
4 msgs
Stephen Mayor Same variable as both fixed and random Jul 15, 2014
Joshua Wiley Same variable as both fixed and random Jul 17, 2014
ONKELINX, Thierry Same variable as both fixed and random Jul 17, 2014
Joshua Wiley Same variable as both fixed and random Jul 17, 2014
Checking modeling assumptions in a binomial GLMM
2 msgs
Ravi Varadhan Checking modeling assumptions in a binomial GLMM Jul 14, 2014
Francisco Rodriguez Sanchez Checking modeling assumptions in a binomial GLMM Jul 17, 2014
Question regarding the estimation of the correlation between random intercepts and random slopes in the lme4 package
4 msgs
Inga Schwabe Question regarding the estimation of the correlation between random intercepts and random slopes in the lme4 package Jul 16, 2014
Ben Bolker Question regarding the estimation of the correlation between random intercepts and random slopes in the lme4 package Jul 16, 2014
Jake Westfall Question regarding the estimation of the correlation between random intercepts and random slopes in the lme4 package Jul 16, 2014
Inga Schwabe Question regarding the estimation of the correlation between random intercepts and random slopes in the lme4 package Jul 17, 2014
How to deal with Hessian error if the model only contains binomial (0, 1) fixed factors?
8 msgs
Julia Sommerfeld How to deal with Hessian error if the model only contains binomial (0, 1) fixed factors? Jul 15, 2014
ONKELINX, Thierry How to deal with Hessian error if the model only contains binomial (0, 1) fixed factors? Jul 15, 2014
Julia Sommerfeld How to deal with Hessian error if the model only contains binomial (0, 1) fixed factors? Jul 15, 2014
ONKELINX, Thierry How to deal with Hessian error if the model only contains binomial (0, 1) fixed factors? Jul 15, 2014
Julia Sommerfeld How to deal with Hessian error if the model only contains binomial (0, 1) fixed factors? Jul 15, 2014
ONKELINX, Thierry How to deal with Hessian error if the model only contains binomial (0, 1) fixed factors? Jul 16, 2014
Ben Bolker How to deal with Hessian error if the model only contains binomial (0, 1) fixed factors? Jul 16, 2014
Julia Sommerfeld How to deal with Hessian error if the model only contains binomial (0, 1) fixed factors? Jul 17, 2014
Very important question regarding the error while using library(lme4)
5 msgs
Ben Bolker Very important question regarding the error while using library(lme4) Jul 15, 2014
Steve Denham Very important question regarding the error while using library(lme4) Jul 15, 2014
Ben Bolker Very important question regarding the error while using library(lme4) Jul 16, 2014
Steve Denham Very important question regarding the error while using library(lme4) Jul 16, 2014
Jake Westfall Very important question regarding the error while using library(lme4) Jul 16, 2014
Significance of Repeatablity Estimates
1 msg
Ben Bolker Significance of Repeatablity Estimates Jul 16, 2014
New book: Beginner's Guide to GAMM with R
1 msg
Highland Statistics Ltd New book: Beginner's Guide to GAMM with R Jul 16, 2014
R2admb-package
1 msg
Ben Bolker R2admb-package Jul 14, 2014
Very important question regarding the error while using library(lme4)
1 msg
Ben Bolker Very important question regarding the error while using library(lme4) Jul 14, 2014
gamm4: extract the (x,y) values of the plotted smooth
1 msg
Nick Lange gamm4: extract the (x,y) values of the plotted smooth Jul 14, 2014
gamm4 model fit error
1 msg
Ben Bolker gamm4 model fit error Jul 13, 2014
gamm4 model fit error
3 msgs
Nicholas Lange gamm4 model fit error Jul 13, 2014
Ben Bolker gamm4 model fit error Jul 13, 2014
Nicholas Lange gamm4 model fit error Jul 13, 2014
visualising interaction with predict.merMod
2 msgs
Lenth, Russell V visualising interaction with predict.merMod Jul 12, 2014
Richard Zijdeman visualising interaction with predict.merMod Jul 13, 2014
Help with pdMat constructors in nlme
1 msg
Daniel Fulop Help with pdMat constructors in nlme Jul 11, 2014
No residual variance using MCMCglmm
4 msgs
Céline Teplitsky No residual variance using MCMCglmm Jul 11, 2014
Jarrod Hadfield No residual variance using MCMCglmm Jul 11, 2014
Celine Teplitsky No residual variance using MCMCglmm Jul 11, 2014
Jarrod Hadfield No residual variance using MCMCglmm Jul 11, 2014
visualising interaction with predict.merMod
2 msgs
Richard Zijdeman visualising interaction with predict.merMod Jul 10, 2014
Henrik Singmann visualising interaction with predict.merMod Jul 10, 2014
A question on item random effects
2 msgs
Anastasiia Romanova A question on item random effects Jul 9, 2014
Ben Bolker A question on item random effects Jul 9, 2014
gls function - goodness of fit
2 msgs
Hebert, Issac (MNR) gls function - goodness of fit Jul 7, 2014
Ben Bolker gls function - goodness of fit Jul 8, 2014
How to extract convergence code from lmer object?
1 msg
Ben Bolker How to extract convergence code from lmer object? Jul 7, 2014
glmer convergence warning
2 msgs
bob martin glmer convergence warning Jul 4, 2014
Ben Bolker glmer convergence warning Jul 5, 2014
Getting the error message: Error: (maxstephalfit) PIRLS step-halvings failed to reduce deviance in pwrssUpdate when trying to fit glmer to my data
2 msgs
Nimrod Rubinstein Getting the error message: Error: (maxstephalfit) PIRLS step-halvings failed to reduce deviance in pwrssUpdate when trying to fit glmer to my data Jul 5, 2014
Ben Bolker Getting the error message: Error: (maxstephalfit) PIRLS step-halvings failed to reduce deviance in pwrssUpdate when trying to fit glmer to my data Jul 5, 2014
Using glmm for penalised spline model
1 msg
Highland Statistics Ltd Using glmm for penalised spline model Jul 4, 2014
Using glmm for penalised spline model
3 msgs
Richman, Ronald Using glmm for penalised spline model Jul 4, 2014
Ben Bolker Using glmm for penalised spline model Jul 4, 2014
Linus Holtermann Using glmm for penalised spline model Jul 4, 2014
[Lme4-authors] Error in lme4 package
3 msgs
Ben Bolker Error in lme4 package Jul 3, 2014
David Federer Error in lme4 package Jul 3, 2014
David Federer Error in lme4 package Jul 3, 2014
help: different p-values from z-statistic and anova in coxme
1 msg
ChenChun help: different p-values from z-statistic and anova in coxme Jul 3, 2014
R2admb-package
1 msg
Ben Bolker R2admb-package Jul 2, 2014
Manipulating Compound Symmetry
1 msg
Ulf Mertens Manipulating Compound Symmetry Jul 2, 2014
R2admb-package
1 msg
Ben Bolker R2admb-package Jul 1, 2014
LRT on fixed-effects
2 msgs
Matías Muñoz LRT on fixed-effects Jun 30, 2014
Tobias Heed LRT on fixed-effects Jul 1, 2014
LRT on fixed-effects (Mat?as Mu?oz)
1 msg
Joel Chan LRT on fixed-effects (Mat?as Mu?oz) Jul 1, 2014