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Bioc-devel March 2013

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Andreas Heider

Last active: Mar 4, 2013
1 msg
Andreas Heider avoiding call to ".find.package" Mar 4, 2013

Antti Honkela

Last active: Mar 4, 2013
1 msg
Antti Honkela avoiding call to ".find.package" Mar 4, 2013

Chia Jing Yi

Last active: Mar 26, 2013
1 msg
Chia Jing Yi Help with EdgeR running error Mar 26, 2013

Cornish, Alexander

Last active: Mar 27, 2013
1 msg
Cornish, Alexander SANTA Package Now Available Mar 27, 2013

Cristobal Fresno Rodríguez

Last active: Mar 13, 2013
2 msgs
Cristobal Fresno Rodríguez Custom CRAN repository in biocLite.R not working Mar 13, 2013 Cristobal Fresno Rodríguez Custom CRAN repository in biocLite.R not working Mar 13, 2013

Dan Tenenbaum

Last active: Mar 29, 2013
19 msgs
Dan Tenenbaum avoiding call to ".find.package" Mar 4, 2013 Dan Tenenbaum avoiding call to ".find.package" Mar 5, 2013 Dan Tenenbaum avoiding call to ".find.package" Mar 7, 2013 Dan Tenenbaum Recent issue with plot method dispatch Mar 13, 2013 Dan Tenenbaum Custom CRAN repository in biocLite.R not working Mar 13, 2013 Dan Tenenbaum Custom CRAN repository in biocLite.R not working Mar 13, 2013 Dan Tenenbaum Custom CRAN repository in biocLite.R not working Mar 13, 2013 Dan Tenenbaum vignettes using foreach on Windows Mar 16, 2013 Dan Tenenbaum request: timings Mar 18, 2013 Dan Tenenbaum Warning in .simpleDuplicateClass(def, prev) Mar 18, 2013 Dan Tenenbaum Warning in .simpleDuplicateClass(def, prev) Mar 19, 2013 Dan Tenenbaum parallel support for Windows and RStudio Mar 21, 2013 Dan Tenenbaum Reminder: release builds will stop on Monday Mar 22, 2013 Dan Tenenbaum Preparing package release notes Mar 26, 2013 Dan Tenenbaum Preparing package release notes Mar 27, 2013 Dan Tenenbaum graphite build error on George2 Mar 28, 2013 Dan Tenenbaum Rsubread build error Mar 28, 2013 Dan Tenenbaum Rsubread build error Mar 29, 2013 Dan Tenenbaum Linking to HTML documents in a package on the BioC web site Mar 29, 2013

Davide Rambaldi

Last active: Mar 4, 2013
1 msg
Davide Rambaldi I would like to publish a bioconductor package. Mar 4, 2013

Elana Fertig

Last active: Mar 5, 2013
1 msg
Elana Fertig avoiding call to ".find.package" Mar 5, 2013

Enrica

Last active: Mar 28, 2013
2 msgs
Enrica graphite build error on George2 Mar 28, 2013 Enrica graphite build error on George2 Mar 28, 2013

Gordon K Smyth

Last active: Mar 27, 2013
1 msg
Gordon K Smyth Preparing package release notes Mar 27, 2013

Gustavo Fernández Bayón

Last active: Mar 27, 2013
2 msgs
Gustavo Fernández Bayón rGADEM crash Mar 26, 2013 Gustavo Fernández Bayón rGADEM crash Mar 27, 2013

Hervé Pagès

Last active: Mar 15, 2013
3 msgs
Hervé Pagès DataFrame's do not like ordered factors Mar 6, 2013 Hervé Pagès Incorrect result from AnnotationDbi::mget on bimap subset when ifnotfound=NA Mar 14, 2013 Hervé Pagès Biostrings: ambiguous matching for 'compareStrings' Mar 15, 2013

James F. Reid

Last active: Mar 13, 2013
3 msgs
James F. Reid vectorize default dist2 function in genefilter Mar 12, 2013 James F. Reid vectorize default dist2 function in genefilter Mar 13, 2013 James F. Reid vectorize default dist2 function in genefilter Mar 13, 2013

Joern Toedling

Last active: Mar 14, 2013
2 msgs
Joern Toedling Recent issue with plot method dispatch Mar 13, 2013 Joern Toedling Recent issue with plot method dispatch Mar 14, 2013

Julian Gehring

Last active: Mar 15, 2013
1 msg
Julian Gehring Biostrings: ambiguous matching for 'compareStrings' Mar 15, 2013

Kasper Daniel Hansen

Last active: Mar 16, 2013
3 msgs
Kasper Daniel Hansen I would like to publish a bioconductor package. Mar 4, 2013 Kasper Daniel Hansen vignettes using foreach on Windows Mar 16, 2013 Kasper Daniel Hansen request: timings Mar 16, 2013

Laurent Gatto

Last active: Mar 26, 2013
2 msgs
Laurent Gatto avoiding call to ".find.package" Mar 4, 2013 Laurent Gatto Bioconductor coding standards Mar 26, 2013

Manuela Benary

Last active: Mar 21, 2013
1 msg
Manuela Benary parallel support for Windows and RStudio Mar 21, 2013

Marc Carlson

Last active: Mar 22, 2013
3 msgs
Marc Carlson I would like to publish a bioconductor package. Mar 4, 2013 Marc Carlson Next Wednesday is the deadline for all new package submissions. Mar 8, 2013 Marc Carlson Mus.musculus and genome version Mar 22, 2013

Martin Morgan

Last active: Mar 28, 2013
9 msgs
Martin Morgan Recent issue with plot method dispatch Mar 13, 2013 Martin Morgan Recent issue with plot method dispatch Mar 13, 2013 Martin Morgan BioC2013, July 18-19 (Developer Day July 17), Seattle: Registration Open Mar 15, 2013 Martin Morgan Recent issue with plot method dispatch Mar 18, 2013 Martin Morgan C++ code performance issues Mar 21, 2013 Martin Morgan C++ code performance issues Mar 22, 2013 Martin Morgan graphite build error on George2 Mar 28, 2013 Martin Morgan graphite build error on George2 Mar 28, 2013 Martin Morgan Rsubread build error Mar 28, 2013

Michael Stadler

Last active: Mar 12, 2013
3 msgs
Michael Stadler contradictions in the return value of predictCoding() from VariantAnnotation Mar 7, 2013 Michael Stadler contradictions in the return value of predictCoding() from VariantAnnotation Mar 7, 2013 Michael Stadler contradictions in the return value of predictCoding() from VariantAnnotation Mar 12, 2013

Moritz Gerstung

Last active: Mar 5, 2013
1 msg
Moritz Gerstung VariantAnnotation bug when loading multiple regions from vcf Mar 5, 2013

Nikolas Pontikos

Last active: Mar 13, 2013
1 msg
Nikolas Pontikos Recent issue with plot method dispatch Mar 13, 2013

Peter Glaus

Last active: Mar 22, 2013
2 msgs
Peter Glaus C++ code performance issues Mar 21, 2013 Peter Glaus C++ code performance issues Mar 22, 2013

Peter Humburg

Last active: Mar 11, 2013
1 msg
Peter Humburg JOB: 3 year post for Postdoctoral Research Scientist in Statistical Functional Genomics at University of Oxford Mar 11, 2013

Renaud Gaujoux

Last active: Mar 14, 2013
1 msg
Renaud Gaujoux Incorrect result from AnnotationDbi::mget on bimap subset when ifnotfound=NA Mar 14, 2013

Robert Castelo

Last active: Mar 26, 2013
1 msg
Robert Castelo rGADEM crash Mar 26, 2013

Sean Davis

Last active: Mar 26, 2013
1 msg
Sean Davis Bioconductor coding standards Mar 26, 2013

Stefanie Tauber

Last active: Mar 19, 2013
3 msgs
Stefanie Tauber Warning in .simpleDuplicateClass(def, prev) Mar 18, 2013 Stefanie Tauber Warning in .simpleDuplicateClass(def, prev) Mar 19, 2013 Stefanie Tauber Warning in .simpleDuplicateClass(def, prev) Mar 19, 2013

Steve Lianoglou

Last active: Mar 6, 2013
2 msgs
Steve Lianoglou DataFrame's do not like ordered factors Mar 6, 2013 Steve Lianoglou DataFrame's do not like ordered factors Mar 6, 2013

Thomas Sandmann

Last active: Mar 7, 2013
1 msg
Thomas Sandmann avoiding call to ".find.package" Mar 7, 2013

Ulrich Bodenhofer

Last active: Mar 26, 2013
2 msgs
Ulrich Bodenhofer Bioconductor coding standards Mar 26, 2013 Ulrich Bodenhofer Bioconductor coding standards Mar 26, 2013

Valerie Obenchain

Last active: Mar 27, 2013
3 msgs
Valerie Obenchain VariantAnnotation bug when loading multiple regions from vcf Mar 5, 2013 Valerie Obenchain contradictions in the return value of predictCoding() from VariantAnnotation Mar 9, 2013 Valerie Obenchain show for GRanges Mar 27, 2013

Vincent Carey

Last active: Mar 27, 2013
1 msg
Vincent Carey show for GRanges Mar 27, 2013

Wei Shi

Last active: Mar 29, 2013
2 msgs
Wei Shi Rsubread build error Mar 28, 2013 Wei Shi Rsubread build error Mar 29, 2013

Wolfgang Huber

Last active: Mar 14, 2013
2 msgs
Wolfgang Huber vectorize default dist2 function in genefilter Mar 12, 2013 Wolfgang Huber vectorize default dist2 function in genefilter Mar 14, 2013

mattia pelizzola

Last active: Mar 22, 2013
1 msg
mattia pelizzola Mus.musculus and genome version Mar 22, 2013