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Bioc-devel May 2016

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Aaron Lun

Last active: May 25, 2016
3 msgs
Aaron Lun problems linking to Rhtslib on Mac OSX May 24, 2016 Aaron Lun problems linking to Rhtslib on Mac OSX May 24, 2016 Aaron Lun problems linking to Rhtslib on Mac OSX May 25, 2016

Aedin Culhane

Last active: May 18, 2016
2 msgs
Aedin Culhane R logo in help files May 18, 2016 Aedin Culhane R logo in help files May 18, 2016

Andrzej Oleś

Last active: May 6, 2016
3 msgs
Andrzej Oleś downloads number status shields for packages May 4, 2016 Andrzej Oleś vignette metadata dissapeared in Sweave/PDF vignettes May 6, 2016 Andrzej Oleś how to declare vignette processing properly May 6, 2016

Bernd Klaus

Last active: May 24, 2016
2 msgs
Bernd Klaus workflow builds on windows but not on mac and linux May 23, 2016 Bernd Klaus workflow builds on windows but not on mac and linux May 24, 2016

Billy Chang

Last active: May 4, 2016
1 msg
Billy Chang svn co with username and password May 4, 2016

Brad Nelms

Last active: May 20, 2016
1 msg
Brad Nelms New package submission warning May 20, 2016

Charles Joly

Last active: May 27, 2016
2 msgs
Charles Joly Pushing updates in the release branch May 22, 2016 Charles Joly Pushing updates in the release branch May 27, 2016

Dan Tenenbaum

Last active: May 29, 2016
32 msgs
Dan Tenenbaum could not install S4Vectors in Mac OS 10.8.5 May 2, 2016 Dan Tenenbaum could not install S4Vectors in Mac OS 10.8.5 May 2, 2016 Dan Tenenbaum Bioconductor 3.3 branch to be created today - do not commit during this time May 3, 2016 Dan Tenenbaum 3.3 branch created May 3, 2016 Dan Tenenbaum 3.3 branch created May 3, 2016 Dan Tenenbaum downloads number status shields for packages May 4, 2016 Dan Tenenbaum svn co with username and password May 4, 2016 Dan Tenenbaum svn co with username and password May 4, 2016 Dan Tenenbaum Bioconductor 3.3 is released May 4, 2016 Dan Tenenbaum error message - package GSAR May 5, 2016 Dan Tenenbaum how to declare vignette processing properly May 6, 2016 Dan Tenenbaum how to declare vignette processing properly May 6, 2016 Dan Tenenbaum New package version and BiocCheck May 7, 2016 Dan Tenenbaum GEOquery for Bioc devel May 8, 2016 Dan Tenenbaum GEOquery for Bioc devel May 8, 2016 Dan Tenenbaum GEOquery for Bioc devel May 8, 2016 Dan Tenenbaum Mac builds in bioconductor devel May 8, 2016 Dan Tenenbaum GEOquery for Bioc devel May 8, 2016 Dan Tenenbaum new download stats May 12, 2016 Dan Tenenbaum \donttest and the "80% of man pages documenting exported objects must have runnable examples" rule May 15, 2016 Dan Tenenbaum Version numbers incremented? May 17, 2016 Dan Tenenbaum New package submission warning May 20, 2016 Dan Tenenbaum test coverage not shown May 23, 2016 Dan Tenenbaum workflow builds on windows but not on mac and linux May 23, 2016 Dan Tenenbaum problems linking to Rhtslib on Mac OSX May 24, 2016 Dan Tenenbaum problems linking to Rhtslib on Mac OSX May 24, 2016 Dan Tenenbaum problems linking to Rhtslib on Mac OSX May 24, 2016 Dan Tenenbaum problems linking to Rhtslib on Mac OSX May 24, 2016 Dan Tenenbaum building packages that depend on openssl (was Re: problems linking to Rhtslib on Mac OSX) May 24, 2016 Dan Tenenbaum problems linking to Rhtslib on Mac OSX May 25, 2016 Dan Tenenbaum there is no package called 'zlibbioc' on WINDOWS May 26, 2016 Dan Tenenbaum Cannot update the release in svn May 29, 2016

Dario Strbenac

Last active: May 26, 2016
3 msgs
Dario Strbenac getGEO for Private Datasets May 16, 2016 Dario Strbenac New package submission warning May 22, 2016 Dario Strbenac Pushing updates in the release branch May 26, 2016

Hector Corrada Bravo

Last active: May 4, 2016
3 msgs
Hector Corrada Bravo Error on genes-method,OrganismDbi May 3, 2016 Hector Corrada Bravo Error on genes-method,OrganismDbi May 3, 2016 Hector Corrada Bravo Spurious errors unit testing on R CMD check May 4, 2016

Hervé Pagès

Last active: May 15, 2016
10 msgs
Hervé Pagès Spurious errors unit testing on R CMD check May 1, 2016 Hervé Pagès Making transcriptLength function a method in GenomicFeatures? May 1, 2016 Hervé Pagès could not install S4Vectors in Mac OS 10.8.5 May 2, 2016 Hervé Pagès downloads number status shields for packages May 5, 2016 Hervé Pagès downloads number status shields for packages May 8, 2016 Hervé Pagès new download stats May 12, 2016 Hervé Pagès new download stats May 12, 2016 Hervé Pagès new download stats May 13, 2016 Hervé Pagès \donttest and the "80% of man pages documenting exported objects must have runnable examples" rule May 15, 2016 Hervé Pagès \donttest and the "80% of man pages documenting exported objects must have runnable examples" rule May 15, 2016

James W. MacDonald

Last active: May 27, 2016
1 msg
James W. MacDonald inconsistent results from applyPileups and pileLettersAt May 27, 2016

Jason Serviss

Last active: May 24, 2016
3 msgs
Jason Serviss problems linking to Rhtslib on Mac OSX May 24, 2016 Jason Serviss problems linking to Rhtslib on Mac OSX May 24, 2016 Jason Serviss building packages that depend on openssl (was Re: problems linking to Rhtslib on Mac OSX) May 24, 2016

Jesper Gådin

Last active: May 27, 2016
2 msgs
Jesper Gådin inconsistent results from applyPileups and pileLettersAt May 27, 2016 Jesper Gådin inconsistent results from applyPileups and pileLettersAt May 27, 2016

Jil Sander

Last active: May 28, 2016
1 msg
Jil Sander Re-direction of internally generated output files May 28, 2016

Joseph Nathaniel Paulson

Last active: May 19, 2016
2 msgs
Joseph Nathaniel Paulson Issues with citations? May 19, 2016 Joseph Nathaniel Paulson Issues with citations? May 19, 2016

Karim Mezhoud

Last active: May 3, 2016
2 msgs
Karim Mezhoud check shiny app: issue with global variables: input$Vars is not found May 3, 2016 Karim Mezhoud check shiny app: issue with global variables: input$Vars is not found May 3, 2016

Kasper Daniel Hansen

Last active: May 17, 2016
3 msgs
Kasper Daniel Hansen GEOquery for Bioc devel May 8, 2016 Kasper Daniel Hansen New Team Member May 8, 2016 Kasper Daniel Hansen Version numbers incremented? May 17, 2016

Leonardo Collado Torres

Last active: May 31, 2016
11 msgs
Leonardo Collado Torres 3.3 branch created May 3, 2016 Leonardo Collado Torres R CMD check error related to data docs in a new package May 4, 2016 Leonardo Collado Torres R CMD check error related to data docs in a new package May 5, 2016 Leonardo Collado Torres Issue importing bigwig files with rtracklayer from Amazon Cloud Drive May 5, 2016 Leonardo Collado Torres Issue importing bigwig files with rtracklayer from Amazon Cloud Drive May 5, 2016 Leonardo Collado Torres how to declare vignette processing properly May 6, 2016 Leonardo Collado Torres new download stats May 12, 2016 Leonardo Collado Torres Version numbers incremented? May 17, 2016 Leonardo Collado Torres Issue importing bigwig files with rtracklayer from Amazon Cloud Drive May 31, 2016 Leonardo Collado Torres Issue importing bigwig files with rtracklayer from Amazon Cloud Drive May 31, 2016 Leonardo Collado Torres Issue importing bigwig files with rtracklayer from Amazon Cloud Drive May 31, 2016

Lori Shepherd

Last active: May 5, 2016
1 msg
Lori Shepherd downloads number status shields for packages May 5, 2016

Ludwig Geistlinger

Last active: May 24, 2016
3 msgs
Ludwig Geistlinger some new warnings in a package May 2, 2016 Ludwig Geistlinger some new warnings in a package May 2, 2016 Ludwig Geistlinger graph: maximum acyclic subgraph / minimum feedback edge set May 24, 2016

Luo Weijun

Last active: May 13, 2016
2 msgs
Luo Weijun new download stats May 12, 2016 Luo Weijun new download stats May 13, 2016

Marcin Kosiński

Last active: May 5, 2016
4 msgs
Marcin Kosiński Update of data packages in RTCGA Family/Factory of R Packages May 2, 2016 Marcin Kosiński downloads number status shields for packages May 4, 2016 Marcin Kosiński downloads number status shields for packages May 4, 2016 Marcin Kosiński RTCGA - Factory of R Packages is Released May 5, 2016

Martin Maechler

Last active: May 17, 2016
1 msg
Martin Maechler \donttest and the "80% of man pages documenting exported objects must have runnable examples" rule May 17, 2016

Martin Morgan

Last active: May 28, 2016
12 msgs
Martin Morgan some new warnings in a package May 2, 2016 Martin Morgan some new warnings in a package May 2, 2016 Martin Morgan How to debug for the warnings? May 2, 2016 Martin Morgan Making transcriptLength function a method in GenomicFeatures? May 3, 2016 Martin Morgan R CMD check error related to data docs in a new package May 5, 2016 Martin Morgan New Team Member May 8, 2016 Martin Morgan New package submission process May 8, 2016 Martin Morgan Bioc2016: User-Oriented Workshops May 11, 2016 Martin Morgan \donttest and the "80% of man pages documenting exported objects must have runnable examples" rule May 15, 2016 Martin Morgan R logo in help files May 18, 2016 Martin Morgan Issues with citations? May 19, 2016 Martin Morgan Re-direction of internally generated output files May 28, 2016

Martin, Tiphaine

Last active: May 29, 2016
1 msg
Martin, Tiphaine Cannot update the release in svn May 29, 2016

Michael Lawrence

Last active: May 31, 2016
4 msgs
Michael Lawrence Issue importing bigwig files with rtracklayer from Amazon Cloud Drive May 5, 2016 Michael Lawrence Issue importing bigwig files with rtracklayer from Amazon Cloud Drive May 5, 2016 Michael Lawrence Issue importing bigwig files with rtracklayer from Amazon Cloud Drive May 31, 2016 Michael Lawrence Issue importing bigwig files with rtracklayer from Amazon Cloud Drive May 31, 2016

Monther Alhamdoosh

Last active: May 26, 2016
1 msg
Monther Alhamdoosh there is no package called 'zlibbioc' on WINDOWS May 26, 2016

Obenchain, Valerie

Last active: May 31, 2016
4 msgs
Obenchain, Valerie Update of data packages in RTCGA Family/Factory of R Packages May 1, 2016 Obenchain, Valerie select(Homo.sapiens,...) failing May 2, 2016 Obenchain, Valerie Pushing updates in the release branch May 26, 2016 Obenchain, Valerie New Package Submission Process May 31, 2016

Ou, Jianhong

Last active: May 2, 2016
4 msgs
Ou, Jianhong could not install S4Vectors in Mac OS 10.8.5 May 2, 2016 Ou, Jianhong could not install S4Vectors in Mac OS 10.8.5 May 2, 2016 Ou, Jianhong could not install S4Vectors in Mac OS 10.8.5 May 2, 2016 Ou, Jianhong How to debug for the warnings? May 2, 2016

Peng Ni

Last active: May 6, 2016
1 msg
Peng Ni New package version and BiocCheck May 6, 2016

Rahmatallah, Yasir

Last active: May 5, 2016
2 msgs
Rahmatallah, Yasir error message - package GSAR May 5, 2016 Rahmatallah, Yasir error message - package GSAR May 5, 2016

Rainer Johannes

Last active: May 4, 2016
2 msgs
Rainer Johannes Making transcriptLength function a method in GenomicFeatures? May 2, 2016 Rainer Johannes Making transcriptLength function a method in GenomicFeatures? May 4, 2016

Ramon Diaz-Uriarte

Last active: May 20, 2016
1 msg
Ramon Diaz-Uriarte test coverage not shown May 20, 2016

Richard Cotton

Last active: May 17, 2016
3 msgs
Richard Cotton \donttest and the "80% of man pages documenting exported objects must have runnable examples" rule May 15, 2016 Richard Cotton \donttest and the "80% of man pages documenting exported objects must have runnable examples" rule May 15, 2016 Richard Cotton \donttest and the "80% of man pages documenting exported objects must have runnable examples" rule May 17, 2016

Robert Castelo

Last active: May 6, 2016
1 msg
Robert Castelo vignette metadata dissapeared in Sweave/PDF vignettes May 6, 2016

Robert M. Flight

Last active: May 4, 2016
1 msg
Robert M. Flight downloads number status shields for packages May 4, 2016

Samuel Wieczorek

Last active: May 9, 2016
1 msg
Samuel Wieczorek New version of PROSTAR and DAPAR packages May 9, 2016

Sean Davis

Last active: May 8, 2016
1 msg
Sean Davis GEOquery for Bioc devel May 8, 2016

Tim Triche, Jr.

Last active: May 8, 2016
1 msg
Tim Triche, Jr. GEOquery for Bioc devel May 8, 2016

Ulrich Bodenhofer

Last active: May 17, 2016
3 msgs
Ulrich Bodenhofer Version numbers incremented? May 17, 2016 Ulrich Bodenhofer Version numbers incremented? May 17, 2016 Ulrich Bodenhofer Version numbers incremented? May 17, 2016

Vincent Carey

Last active: May 8, 2016
7 msgs
Vincent Carey select(Homo.sapiens,...) failing May 2, 2016 Vincent Carey select(Homo.sapiens,...) failing May 2, 2016 Vincent Carey Error on genes-method,OrganismDbi May 3, 2016 Vincent Carey how to declare vignette processing properly May 6, 2016 Vincent Carey how to declare vignette processing properly May 6, 2016 Vincent Carey how to declare vignette processing properly May 6, 2016 Vincent Carey GEOquery for Bioc devel May 8, 2016

Wolfgang Huber

Last active: May 8, 2016
1 msg
Wolfgang Huber downloads number status shields for packages May 8, 2016