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Bioc-devel November 2020

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Monday, November 30, 2020 2 emails
xin wwa CoxBoost Shepherd, Lori CoxBoost
Sunday, November 29, 2020 1 email
xin wwa CoxBoost
Thursday, November 26, 2020 5 emails
Martin Morgan Query on updating version for bioconda-bambu Martin Morgan Solved Bug commiting problem Vincent Carey Missing knitcitations package on devel for PharmacoGx Selcen Arı Solved Bug commiting problem Mike Smith Missing knitcitations package on devel for PharmacoGx
Wednesday, November 25, 2020 4 emails
CHEN Ying Query on updating version for bioconda-bambu Eeles, Christopher Missing knitcitations package on devel for PharmacoGx Vincent Carey apologies Vincent Carey topics sought for bioc tab discussion dec 3 2020
Tuesday, November 24, 2020 6 emails
Martin Morgan epihet problems reported in the Multiple platform build/check report for BioC 3.12 Xiaowen Chen epihet problems reported in the Multiple platform build/check report for BioC 3.12 Martin Morgan epihet problems reported in the Multiple platform build/check report for BioC 3.12 Xiaowen Chen epihet problems reported in the Multiple platform build/check report for BioC 3.12 Martin Morgan Running vignettes one at a time works but build_vignettes causes buffer overflow Shraddha Pai Running vignettes one at a time works but build_vignettes causes buffer overflow
Monday, November 23, 2020 12 emails
Shepherd, Lori epihet problems reported in the Multiple platform build/check report for BioC 3.12 Shepherd, Lori epihet problems reported in the Multiple platform build/check report for BioC 3.12 Xiaowen Chen epihet problems reported in the Multiple platform build/check report for BioC 3.12 Vincent Carey RCurl on Windows James W. MacDonald RCurl on Windows Shepherd, Lori epihet problems reported in the Multiple platform build/check report for BioC 3.12 Vincent Carey RCurl on Windows Xiaowen Chen epihet problems reported in the Multiple platform build/check report for BioC 3.12 Martin Morgan Running vignettes one at a time works but build_vignettes causes buffer overflow Vincent Carey RCurl on Windows James W. MacDonald RCurl on Windows Shraddha Pai Running vignettes one at a time works but build_vignettes causes buffer overflow
Friday, November 20, 2020 5 emails
Bozdag, Serdar Maintainer change request -Phenogenranker Shepherd, Lori Maintainer change request -Phenogenranker Shraddha Pai Switch to rJava - "buffer overflow detected" error Shepherd, Lori View package posts from its web page Stefano de Pretis View package posts from its web page
Thursday, November 19, 2020 6 emails
Bozdag, Serdar Maintainer change request -Phenogenranker Mike Smith Issues with images in vignette kqc Post to this list Sudeep Sahadevan Issues with images in vignette Martin Morgan Issues with images in vignette Sudeep Sahadevan Issues with images in vignette
Wednesday, November 18, 2020 2 emails
Laurent Gatto mzR and Rccp issue when building package Bruno pereira mzR and Rccp issue when building package
Tuesday, November 17, 2020 1 email
Shepherd, Lori Single Package Builder Updates
Monday, November 16, 2020 3 emails
Mike Smith Bioconductor Developers Forum - 19th November Shepherd, Lori How to Push a Bug Fix Live - MSstatsTMTPTM Devon Kohler How to Push a Bug Fix Live - MSstatsTMTPTM
Saturday, November 14, 2020 2 emails
Vincent Carey Would it make sense for BiocManager::install to cache downloaded packages? Vincent Carey Would it make sense for BiocManager::install to cache downloaded packages?
Friday, November 13, 2020 3 emails
Martin Morgan Acceptable dataset origins besides ExperimentHub Shepherd, Lori Problem with EnMCB Hector Gracia Acceptable dataset origins besides ExperimentHub
Thursday, November 12, 2020 5 emails
xin wwa Problem with EnMCB Shepherd, Lori Issue when merging upstream current release branch Hélène Borges Issue when merging upstream current release branch Shepherd, Lori Issue when merging upstream current release branch Hélène Borges Issue when merging upstream current release branch
Tuesday, November 10, 2020 5 emails
Liu, Qian git credential problem Nitesh Turaga git credential problem Shepherd, Lori Acceptable dataset origins besides ExperimentHub Sean Davis Acceptable dataset origins besides ExperimentHub Hector Gracia Acceptable dataset origins besides ExperimentHub
Monday, November 9, 2020 1 email
Qian Liu git credential problem
Sunday, November 8, 2020 5 emails
Kasper Daniel Hansen Compiling a cpp source code while installing package Levi Waldron BioC2021 organizing committee Martin Morgan Compiling a cpp source code while installing package Vincent Carey Compiling a cpp source code while installing package Alexandru Voda Compiling a cpp source code while installing package
Saturday, November 7, 2020 2 emails
Martin Morgan Compiling a cpp source code while installing package Alexandru Voda Compiling a cpp source code while installing package
Thursday, November 5, 2020 6 emails
Martin Morgan Unable to install "msdata" package in current BioC 3.13 docker Martin Morgan Unable to install "msdata" package in current BioC 3.13 docker Rainer Johannes Unable to install "msdata" package in current BioC 3.13 docker Nitesh Turaga Unable to install "msdata" package in current BioC 3.13 docker Mike Smith Unable to install "msdata" package in current BioC 3.13 docker Rainer Johannes Unable to install "msdata" package in current BioC 3.13 docker
Wednesday, November 4, 2020 6 emails
Martin Morgan Would it make sense for BiocManager::install to cache downloaded packages? Vincent Carey Would it make sense for BiocManager::install to cache downloaded packages? Keith Hughitt Would it make sense for BiocManager::install to cache downloaded packages? Martin Morgan Vignette building error in multiGSEA Vincent Carey Vignette building error in multiGSEA Sebastian Canzler Vignette building error in multiGSEA
Tuesday, November 3, 2020 3 emails
Turaga, Nitesh bioconductor_docker:RELEASE_3_12 is available Shepherd, Lori latest devel version of igvR - apparently not picked up by the build system Paul Shannon latest devel version of igvR - apparently not picked up by the build system
Monday, November 2, 2020 2 emails
Nitesh Turaga change of e-mail address Anamika Thalor Regarding installation of bioconductor version 2.13